| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
Click here to switch to the map view.
The map label for this gene is 188527008
Identifier: 188527008
GI number: 188527008
Start: 192802
End: 193104
Strand: Direct
Name: 188527008
Synonym: HPSH_01040
Alternate gene names: NA
Gene position: 192802-193104 (Clockwise)
Preceding gene: 188527007
Following gene: 188527010
Centisome position: 11.99
GC content: 39.93
Gene sequence:
>303_bases ATGAAAAAGATGATTTTTTTATTTTTAGTGGTGTTGGGGGGTTTAGAAGCGCAAAGCACTTATTGCAGCGATCATTGCGA AGGCACGCCAGATAGCCGTATCCCTCCTATGGGGTTTTATTTTAGTTTTGCGCATTCAGTGAAATATTACTTGCAAGATC CGCAAGAGCGCGATCACAAGCTTGAAAAATGCCACAAAGCCTTTGATTCGACTCTTAAGGTTAATTTTATTACGAAGTCT TTTAAAAAGGATTGCAAGCATGCGCAAATGGCTTTAGAGCAGTCCCAACAAAAAACTCCATGA
Upstream 100 bases:
>100_bases GGGCGATTTAATGCTTTTAGATGCTTTTGGTGGGGGATTGACTTGGGGTTCAGCGTTGGTGTATTTTGGAGGAAGTTAGG AAAAGATTGAAGGAGTATTG
Downstream 100 bases:
>100_bases GAGGTTTTGGTCGCTTTGTGGCAAAACTCTTTTTAAATTTTATCCCACTAGCGCGAAAAACTCTCTCCTTTAGGGCGTAA GATGCAAGCACATAGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MKKMIFLFLVVLGGLEAQSTYCSDHCEGTPDSRIPPMGFYFSFAHSVKYYLQDPQERDHKLEKCHKAFDSTLKVNFITKS FKKDCKHAQMALEQSQQKTP
Sequences:
>Translated_100_residues MKKMIFLFLVVLGGLEAQSTYCSDHCEGTPDSRIPPMGFYFSFAHSVKYYLQDPQERDHKLEKCHKAFDSTLKVNFITKS FKKDCKHAQMALEQSQQKTP >Mature_100_residues MKKMIFLFLVVLGGLEAQSTYCSDHCEGTPDSRIPPMGFYFSFAHSVKYYLQDPQERDHKLEKCHKAFDSTLKVNFITKS FKKDCKHAQMALEQSQQKTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11581; Mature: 11581
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMIFLFLVVLGGLEAQSTYCSDHCEGTPDSRIPPMGFYFSFAHSVKYYLQDPQERDHK CHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH LEKCHKAFDSTLKVNFITKSFKKDCKHAQMALEQSQQKTP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKMIFLFLVVLGGLEAQSTYCSDHCEGTPDSRIPPMGFYFSFAHSVKYYLQDPQERDHK CHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH LEKCHKAFDSTLKVNFITKSFKKDCKHAQMALEQSQQKTP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA