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The map label for this gene is 188526987

Identifier: 188526987

GI number: 188526987

Start: 172827

End: 173528

Strand: Direct

Name: 188526987

Synonym: HPSH_00920

Alternate gene names: NA

Gene position: 172827-173528 (Clockwise)

Preceding gene: 188526986

Following gene: 188526988

Centisome position: 10.74

GC content: 38.75

Gene sequence:

>702_bases
TTGAATTATATTGATTTGGCGTTACTTGTGGTGGTGGTAGCCTTTGGGATTAGGGGATTTTATCATGGCTTCGTGAGTGA
AGTGGCGGGGACTTTAGGGATTGTGCTTGGCGTGTATTTAGCGTCTCGCTATTCTGTGGCTGTTGGAAATTTATTTTCAG
AGCATTTGTATGATTTAAGAAATGAAACCATGACGAATCTCATCGGTTTTTTGTTGGTGTTAGCGTCTATTTGGGTGTTT
TTTTTAGCTTTTGGAGTGTTGCTAGGCAAGGTGTTAGTCTTTAGCGGGTTAGGCATTATAGACAAAGCGTTAGGGTTTAT
TTTTTCATGCTTGAAGACTTTTTTAGTGCTTTCTTTCATTCTCTATGCACTTTCTAAAATGGAAGTGATGAAAGACGCTA
ACGCCTACTTGCAAGAAAAAAGCGATATTTTCCCCACCATGAAAAGCGTTGCTAGTAAGATCATGCGCCTTGATGGCGTC
AAACATGTGGAACAAAACCTTAAAAACAACCTTGAAGAAATGAGCGATGGAGTCAAAAATAAAAAATCTCTCAATAAAAC
TAAAGAGTCTTTTGATAAAGCGATGGATAAGGGCATGGAAGCTTTAAAAGAAAAGGCTAAAGACTTGCCTAAAAACATGC
TAGATCCAAAAACTAACCAAACCCCACCAAACCCCACCCCATCTAATAAAGAACCCCTATAA

Upstream 100 bases:

>100_bases
TAAAAATCATGAGCGTTTTTTTTTGGGGTGTTTTTGGGGCGTTTTTGAGCGCTCGCTATCTTTATGCGAGATATATGAGA
GAAAGGTTTGGGTTTAGGGT

Downstream 100 bases:

>100_bases
AGGCATAACATGTTTTCTAACCAATACATCCAACAACGCATCCATAAAGCCAACAGCTTGAGAGAAGAAGGGAAAAACCC
TTATAAAAACGGCTTGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: CvpA Family Protein; Inner Membrane Protein OxaA; Integral Membrane Protein

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNYIDLALLVVVVAFGIRGFYHGFVSEVAGTLGIVLGVYLASRYSVAVGNLFSEHLYDLRNETMTNLIGFLLVLASIWVF
FLAFGVLLGKVLVFSGLGIIDKALGFIFSCLKTFLVLSFILYALSKMEVMKDANAYLQEKSDIFPTMKSVASKIMRLDGV
KHVEQNLKNNLEEMSDGVKNKKSLNKTKESFDKAMDKGMEALKEKAKDLPKNMLDPKTNQTPPNPTPSNKEPL

Sequences:

>Translated_233_residues
MNYIDLALLVVVVAFGIRGFYHGFVSEVAGTLGIVLGVYLASRYSVAVGNLFSEHLYDLRNETMTNLIGFLLVLASIWVF
FLAFGVLLGKVLVFSGLGIIDKALGFIFSCLKTFLVLSFILYALSKMEVMKDANAYLQEKSDIFPTMKSVASKIMRLDGV
KHVEQNLKNNLEEMSDGVKNKKSLNKTKESFDKAMDKGMEALKEKAKDLPKNMLDPKTNQTPPNPTPSNKEPL
>Mature_233_residues
MNYIDLALLVVVVAFGIRGFYHGFVSEVAGTLGIVLGVYLASRYSVAVGNLFSEHLYDLRNETMTNLIGFLLVLASIWVF
FLAFGVLLGKVLVFSGLGIIDKALGFIFSCLKTFLVLSFILYALSKMEVMKDANAYLQEKSDIFPTMKSVASKIMRLDGV
KHVEQNLKNNLEEMSDGVKNKKSLNKTKESFDKAMDKGMEALKEKAKDLPKNMLDPKTNQTPPNPTPSNKEPL

Specific function: Unknown

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25871; Mature: 25871

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYIDLALLVVVVAFGIRGFYHGFVSEVAGTLGIVLGVYLASRYSVAVGNLFSEHLYDLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NETMTNLIGFLLVLASIWVFFLAFGVLLGKVLVFSGLGIIDKALGFIFSCLKTFLVLSFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LYALSKMEVMKDANAYLQEKSDIFPTMKSVASKIMRLDGVKHVEQNLKNNLEEMSDGVKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKSLNKTKESFDKAMDKGMEALKEKAKDLPKNMLDPKTNQTPPNPTPSNKEPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNYIDLALLVVVVAFGIRGFYHGFVSEVAGTLGIVLGVYLASRYSVAVGNLFSEHLYDLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NETMTNLIGFLLVLASIWVFFLAFGVLLGKVLVFSGLGIIDKALGFIFSCLKTFLVLSFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LYALSKMEVMKDANAYLQEKSDIFPTMKSVASKIMRLDGVKHVEQNLKNNLEEMSDGVKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKSLNKTKESFDKAMDKGMEALKEKAKDLPKNMLDPKTNQTPPNPTPSNKEPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA