| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
Click here to switch to the map view.
The map label for this gene is 188526986
Identifier: 188526986
GI number: 188526986
Start: 172678
End: 172830
Strand: Direct
Name: 188526986
Synonym: HPSH_00915
Alternate gene names: NA
Gene position: 172678-172830 (Clockwise)
Preceding gene: 188526982
Following gene: 188526987
Centisome position: 10.74
GC content: 37.25
Gene sequence:
>153_bases GTGTTATTATTTTCAAATTTCAAGTCTAAAGAGCGTGGATTGATAGCGTTAAAAATCATGAGCGTTTTTTTTTGGGGTGT TTTTGGGGCGTTTTTGAGCGCTCGCTATCTTTATGCGAGATATATGAGAGAAAGGTTTGGGTTTAGGGTTTGA
Upstream 100 bases:
>100_bases GGCTAAATTTTGAAACCTTGAGATTGTTTTAGTGTATTATAGCTATATTTTAATTTAAGAATTTTAGATTGATTTTTTTA AGGGTAGTTTTTTTTAAGTT
Downstream 100 bases:
>100_bases ATTATATTGATTTGGCGTTACTTGTGGTGGTGGTAGCCTTTGGGATTAGGGGATTTTATCATGGCTTCGTGAGTGAAGTG GCGGGGACTTTAGGGATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MLLFSNFKSKERGLIALKIMSVFFWGVFGAFLSARYLYARYMRERFGFRV
Sequences:
>Translated_50_residues MLLFSNFKSKERGLIALKIMSVFFWGVFGAFLSARYLYARYMRERFGFRV >Mature_50_residues MLLFSNFKSKERGLIALKIMSVFFWGVFGAFLSARYLYARYMRERFGFRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6022; Mature: 6022
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLFSNFKSKERGLIALKIMSVFFWGVFGAFLSARYLYARYMRERFGFRV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLLFSNFKSKERGLIALKIMSVFFWGVFGAFLSARYLYARYMRERFGFRV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA