Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188526963

Identifier: 188526963

GI number: 188526963

Start: 151658

End: 152614

Strand: Direct

Name: 188526963

Synonym: HPSH_00800

Alternate gene names: NA

Gene position: 151658-152614 (Clockwise)

Preceding gene: 188526962

Following gene: 188526965

Centisome position: 9.43

GC content: 40.44

Gene sequence:

>957_bases
ATGTTGAGTAGAGACATTGTCCAATATTCCAAGATTCGCACCGAGCTATACGCTTATCTTACCTATTTGTTTTCGCACAA
TATCCGCAACCACCTCCCTGAAATCACTTTGGATTATTTAAACAAACAGATCAAAAAAATGCATGCTGAAATCAAAATGG
CAAAAAATTTTTTTGTGTTAGACGCTAAAGGCATGCTAATTCTTAAGCCAAGCCAGCTTAAAGAGCAGGGGCATAAGGAG
GGGATATTAGAGCATGATTTAACAGAAGGGATTGAATTAGAATCGCATGCCAGCTTTAGCGATAAGTATTATTTTTATCA
AGCCGTGAGTGAAAAGCGTTGCATTTTAACGGACCCCTATCCTTCTAAAAAAGGAAACCATTTGGTAGTGAGCGCGTCTT
ACCCGGTGTATGATCAAAATAATGATCTAGCGTTTGTGGTGTGCTTGCAAATCCCTTTGAGGGTGGCGATTGAAATCAGT
TCGCCTTCAAAGTATTTCAGAACCTTTAGCGAAGGGAGCATGGTCATGTATTTTATGATTTCTATCATGCTCACTTTGGT
GTCGTTGCTTTTATTTGTGAAATGCATTTCTAGCTTTTGGACAGCGATTGTCAATTTTAGCAGTTTTGACATTAAAGAAG
TGTTCCACCCCATTGTGCTTTTAACCCTAGCCTTAGCCACCTTTGATCTGGTCAAGGCGATTTTTGAAGAGGAAGTGTTG
GGTAAAAATAGCGGGGACAACCACCATGCGATCCACCGCACGATGATTAGGTTTTTAGGCTCTATCATTATCGCATTAGC
CATTGAAGCGTTGATGTTAGTGTTTAAATTCAGCGTGAGCGAACCGGATAAAATCACTTATGCGGTGTATTTGGCTATCG
GTGTGGCAGTGCTTTTGATCAGTTTAGCGATTTATGTTAAATTCGCCTATAGCGTGTTGCCCAAACGAGAACGCTAA

Upstream 100 bases:

>100_bases
AAAAAAACGCCTCTTTTATCATTGATGCAAGGGGTGGTTTAAATAATTCTTTAAAACAAGTGCTACAATTCATCGCATAA
TTTTTTTTAAAGGCCTTTTG

Downstream 100 bases:

>100_bases
GAGTTAAAAAATTTTTCTTTTAAGCGTTTGAAAATCCTATTCAATCTAAAAAAGACATATTCTAAAAGGGTTTTTGGATT
GAGTAGGGGGGCAAGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: General Glycosylation Pathway Protein PglG; Inner Membrane Protein; Cache Domain Protein

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNKQIKKMHAEIKMAKNFFVLDAKGMLILKPSQLKEQGHKE
GILEHDLTEGIELESHASFSDKYYFYQAVSEKRCILTDPYPSKKGNHLVVSASYPVYDQNNDLAFVVCLQIPLRVAIEIS
SPSKYFRTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVNFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVL
GKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAIGVAVLLISLAIYVKFAYSVLPKRER

Sequences:

>Translated_318_residues
MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNKQIKKMHAEIKMAKNFFVLDAKGMLILKPSQLKEQGHKE
GILEHDLTEGIELESHASFSDKYYFYQAVSEKRCILTDPYPSKKGNHLVVSASYPVYDQNNDLAFVVCLQIPLRVAIEIS
SPSKYFRTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVNFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVL
GKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAIGVAVLLISLAIYVKFAYSVLPKRER
>Mature_318_residues
MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNKQIKKMHAEIKMAKNFFVLDAKGMLILKPSQLKEQGHKE
GILEHDLTEGIELESHASFSDKYYFYQAVSEKRCILTDPYPSKKGNHLVVSASYPVYDQNNDLAFVVCLQIPLRVAIEIS
SPSKYFRTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVNFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVL
GKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAIGVAVLLISLAIYVKFAYSVLPKRER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36378; Mature: 36378

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNKQIKKMHAEIKMAKNFFVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
DAKGMLILKPSQLKEQGHKEGILEHDLTEGIELESHASFSDKYYFYQAVSEKRCILTDPY
ECCCEEEECHHHHHHCHHHCCCHHHHHHCCCCCCCCCCCCCCHHHEEHHCCCCEEEECCC
PSKKGNHLVVSASYPVYDQNNDLAFVVCLQIPLRVAIEISSPSKYFRTFSEGSMVMYFMI
CCCCCCEEEEEECCCEEECCCCEEEEEEEECCEEEEEEECCCHHHHHHHCCCCHHHHHHH
SIMLTLVSLLLFVKCISSFWTAIVNFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAIGVAVLLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
SLAIYVKFAYSVLPKRER
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNKQIKKMHAEIKMAKNFFVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
DAKGMLILKPSQLKEQGHKEGILEHDLTEGIELESHASFSDKYYFYQAVSEKRCILTDPY
ECCCEEEECHHHHHHCHHHCCCHHHHHHCCCCCCCCCCCCCCHHHEEHHCCCCEEEECCC
PSKKGNHLVVSASYPVYDQNNDLAFVVCLQIPLRVAIEISSPSKYFRTFSEGSMVMYFMI
CCCCCCEEEEEECCCEEECCCCEEEEEEEECCEEEEEEECCCHHHHHHHCCCCHHHHHHH
SIMLTLVSLLLFVKCISSFWTAIVNFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAIGVAVLLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
SLAIYVKFAYSVLPKRER
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA