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The map label for this gene is ureF [H]

Identifier: 188526874

GI number: 188526874

Start: 61257

End: 62000

Strand: Reverse

Name: ureF [H]

Synonym: HPSH_00330

Alternate gene names: 188526874

Gene position: 62000-61257 (Counterclockwise)

Preceding gene: 188526875

Following gene: 188526873

Centisome position: 3.85

GC content: 40.73

Gene sequence:

>744_bases
GTGAAAAGCACTAAAAAAAGCGTGGGCATGCCCCCAAAAACTCCAAAAGACAACAACGCTCATGTGGATAATGAATTTCT
GATTTTGCAAGTCAATGATGCGGTGTTCCCCATTGGCTCTTACACGCATTCTTTTGGGCTAGAAACTTACATCCAGCAAA
AAAAGGTTACTAATAAAGAAAGCGCTTTAGAATATTTGAAAGCCAATCTCTCTAGCCAGTTCCTTTATACGGAAATGCTG
AGTTTGAAATTAACCTATGAAAGCACCCTCCAACAAGATTTAAAAAAGATCTTAGGGGTTGAAGAAATCATTATGCTATC
CACAAGCCCCATGGAATTACGATTAGCCAACCAAAAGCTGGGCAATCGTTTCATTAAAACCTTACAAGCCATGAACGAAT
TGGACATGGGCGAATTTTTCAACGCTTACGCTCAAAAAACCAAAGATCCCACCCATGCCACTAGCTATGGCGTTTTTGCG
GCGAGTTTGGGGATTGAATTGAAAAAGGCTTTAAGGCATTATCTTTATGCACAAACTTCTAACATGGTGATCAACTGCGT
TAAAAGCGTCCCTTTATCCCAAAACGACGGGCAAAAAATCTTATTGAGCTTGCAAAGCCCTTTTAACCAGCTCATAGAAA
AAACCCTAGAACTAGACGAAAGCCACCTGTGTGCAGCAAGCGTTCAAAACGACATTAAGGCGATGCAACATGAGAGTTTA
TACTCGCGCCTTTATATGTCTTGA

Upstream 100 bases:

>100_bases
GTGAGCATGCCTCATAGCGAGCCTAATTTTAAGGTCTCACTAGCGAGCGATTTTAAAGTGGTCATGAAATAGAAAATAAC
AGACAGATGAAGGAAAAAGC

Downstream 100 bases:

>100_bases
ATTTTAATCTCAAATTGAAAGGAATTTTATGGTAAAAATTGGAGTTTGTGGTCCTGTAGGAAGCGGTAAAACCGCCTTGA
TTGAAGCTTTGACGCGCCAC

Product: urease accessory protein (ureF)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKSTKKSVGMPPKTPKDNNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEML
SLKLTYESTLQQDLKKILGVEEIIMLSTSPMELRLANQKLGNRFIKTLQAMNELDMGEFFNAYAQKTKDPTHATSYGVFA
ASLGIELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDIKAMQHESL
YSRLYMS

Sequences:

>Translated_247_residues
MKSTKKSVGMPPKTPKDNNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEML
SLKLTYESTLQQDLKKILGVEEIIMLSTSPMELRLANQKLGNRFIKTLQAMNELDMGEFFNAYAQKTKDPTHATSYGVFA
ASLGIELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDIKAMQHESL
YSRLYMS
>Mature_247_residues
MKSTKKSVGMPPKTPKDNNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEML
SLKLTYESTLQQDLKKILGVEEIIMLSTSPMELRLANQKLGNRFIKTLQAMNELDMGEFFNAYAQKTKDPTHATSYGVFA
ASLGIELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDIKAMQHESL
YSRLYMS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 27916; Mature: 27916

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTKKSVGMPPKTPKDNNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKE
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHHHHHCCCHH
SALEYLKANLSSQFLYTEMLSLKLTYESTLQQDLKKILGVEEIIMLSTSPMELRLANQKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHEEHHHHHH
GNRFIKTLQAMNELDMGEFFNAYAQKTKDPTHATSYGVFAASLGIELKKALRHYLYAQTS
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDIKAMQHESL
HHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
YSRLYMS
HHHHHCC
>Mature Secondary Structure
MKSTKKSVGMPPKTPKDNNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKE
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHHHHHCCCHH
SALEYLKANLSSQFLYTEMLSLKLTYESTLQQDLKKILGVEEIIMLSTSPMELRLANQKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHEEHHHHHH
GNRFIKTLQAMNELDMGEFFNAYAQKTKDPTHATSYGVFAASLGIELKKALRHYLYAQTS
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDIKAMQHESL
HHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
YSRLYMS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]