| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is ureE
Identifier: 188526875
GI number: 188526875
Start: 62029
End: 62541
Strand: Reverse
Name: ureE
Synonym: HPSH_00335
Alternate gene names: 188526875
Gene position: 62541-62029 (Counterclockwise)
Preceding gene: 188526876
Following gene: 188526874
Centisome position: 3.89
GC content: 40.16
Gene sequence:
>513_bases ATGATCATAGAGCGTTTAATAGGCAATCTAAGGGATTTAAACCCCTTGGATTTCAGCGTGGATTATGTGGATTTGGAATG GTTTGAAACGAGGAAAAAAATCGCTCGCTTTAAAACCAGGCAAGGCAAAGACATAGCCATACGCCTTAAAGACGCTCCCA AGTTGGGTCTCTCTCAAGGGGATATTTTATTTAAAGAAGAAAAGGAAATTATCGCCGTTAATATCTTGGATTCTGAAGTC ATTCACATCCAAGCTAAGAGCGTGGCAGAAGTGGCTAAAATATGCTACGAAATAGGAAACCGCCATGCGGCTTTATACTA TGGCGAGTCTCAATTTGAATTTAAAACACCATTTGAAAAGCCCACACTAGCCTTGTTAGAAAAGCTAGGGGTTCAAAATC ATGTTTTAAGTTCAAAACTGGATTCCAAAGATCGCTTAACCGTGAGCATGCCTCATAGCGAGCCTAATTTTAAGGTCTCA CTAGCGAGCGATTTTAAAGTGGTCATGAAATAG
Upstream 100 bases:
>100_bases ATCCCTTTAGGGAAATTCACTCCATGGCTTGCTATCATTGAGGGTATTTTAACCGCTTGGATCCCTGCTTGGTTACTCTT TATCCAACACTGGGTGTGAG
Downstream 100 bases:
>100_bases AAAATAACAGACAGATGAAGGAAAAAGCGTGAAAAGCACTAAAAAAAGCGTGGGCATGCCCCCAAAAACTCCAAAAGACA ACAACGCTCATGTGGATAAT
Product: urease accessory protein UreE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MIIERLIGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEV IHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNHVLSSKLDSKDRLTVSMPHSEPNFKVS LASDFKVVMK
Sequences:
>Translated_170_residues MIIERLIGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEV IHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNHVLSSKLDSKDRLTVSMPHSEPNFKVS LASDFKVVMK >Mature_170_residues MIIERLIGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEV IHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNHVLSSKLDSKDRLTVSMPHSEPNFKVS LASDFKVVMK
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly [H]
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 [H]
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N [H]
EC number: NA
Molecular weight: Translated: 19421; Mature: 19421
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIERLIGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQG CCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC DILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEK CEEEECCCCEEEEEEECCEEEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCC PTLALLEKLGVQNHVLSSKLDSKDRLTVSMPHSEPNFKVSLASDFKVVMK HHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCEEEECC >Mature Secondary Structure MIIERLIGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQG CCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC DILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEK CEEEECCCCEEEEEEECCEEEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCC PTLALLEKLGVQNHVLSSKLDSKDRLTVSMPHSEPNFKVSLASDFKVVMK HHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA