| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is ureG [H]
Identifier: 188526873
GI number: 188526873
Start: 60629
End: 61228
Strand: Reverse
Name: ureG [H]
Synonym: HPSH_00325
Alternate gene names: 188526873
Gene position: 61228-60629 (Counterclockwise)
Preceding gene: 188526874
Following gene: 188526872
Centisome position: 3.81
GC content: 44.33
Gene sequence:
>600_bases ATGGTAAAAATTGGAGTTTGTGGTCCTGTAGGAAGCGGTAAAACCGCCTTGATTGAAGCTTTGACGCGCCACATGTCAAA AGATTATGACATGGCGGTCATCACTAATGATATTTACACGAAAGAAGACGCAGAGTTTATGTGCAAAAATTCGGTGATGC CACGAGATAGGATCATTGGCGTAGAAACAGGAGGCTGTCCGCACACAGCTATTAGAGAAGACGCTTCTATGAATTTAGAA GCGGTAGAAGAAATGCATGGCCGTTTCCCTAATTTGGAATTGCTTTTGATTGAAAGCGGAGGCGATAACCTTTCGGCGAC TTTTAATCCGGAGCTAGCGGACTTTACGATTTTTGTGATTGATGTGGCTGAGGGCGATAAAATCCCCAGGAAAGGCGGGC CAGGAATCACGCGCTCAGACTTGCTTGTCATCAATAAGATTGATTTAGCCCCCTATGTGGGAGCGGACTTGAAAGTCATG GAAAGGGATTCTAAAAAAATGCGTGGCGAAAAGCCCTTTATTTTTACGAATATCCGCGCTAAAGAAGGTTTAGACGATGT GATCGCTTGGATCAAACGCAACGCTTTATTGGAAGATTGA
Upstream 100 bases:
>100_bases GCAGCAAGCGTTCAAAACGACATTAAGGCGATGCAACATGAGAGTTTATACTCGCGCCTTTATATGTCTTGAATTTTAAT CTCAAATTGAAAGGAATTTT
Downstream 100 bases:
>100_bases TGAACACTTACGCTCAAGAATCCAAGCTCAGGTTAAAAACCAAAATAGGGGCTGACGGGCGGTGCGTGATTGAAGACAAT TTTTTCACGCCTCCCTTTAA
Product: urease accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIGVETGGCPHTAIREDASMNLE AVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVM ERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNALLED
Sequences:
>Translated_199_residues MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIGVETGGCPHTAIREDASMNLE AVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVM ERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNALLED >Mature_199_residues MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIGVETGGCPHTAIREDASMNLE AVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVM ERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNALLED
Specific function: Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by ureG [H]
COG id: COG0378
COG function: function code OK; Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003495 - InterPro: IPR012202 - InterPro: IPR004400 [H]
Pfam domain/function: PF02492 cobW [H]
EC number: NA
Molecular weight: Translated: 21942; Mature: 21942
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIG CEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCHHEEE VETGGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVI EECCCCCCHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCEEEEEE DVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEKPFIFTNIRA ECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHCCCCCEEEEECCH KEGLDDVIAWIKRNALLED HCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIG CEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCHHEEE VETGGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVI EECCCCCCHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCEEEEEE DVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEKPFIFTNIRA ECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHCCCCCEEEEECCH KEGLDDVIAWIKRNALLED HCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA