Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is ureG [H]

Identifier: 188526873

GI number: 188526873

Start: 60629

End: 61228

Strand: Reverse

Name: ureG [H]

Synonym: HPSH_00325

Alternate gene names: 188526873

Gene position: 61228-60629 (Counterclockwise)

Preceding gene: 188526874

Following gene: 188526872

Centisome position: 3.81

GC content: 44.33

Gene sequence:

>600_bases
ATGGTAAAAATTGGAGTTTGTGGTCCTGTAGGAAGCGGTAAAACCGCCTTGATTGAAGCTTTGACGCGCCACATGTCAAA
AGATTATGACATGGCGGTCATCACTAATGATATTTACACGAAAGAAGACGCAGAGTTTATGTGCAAAAATTCGGTGATGC
CACGAGATAGGATCATTGGCGTAGAAACAGGAGGCTGTCCGCACACAGCTATTAGAGAAGACGCTTCTATGAATTTAGAA
GCGGTAGAAGAAATGCATGGCCGTTTCCCTAATTTGGAATTGCTTTTGATTGAAAGCGGAGGCGATAACCTTTCGGCGAC
TTTTAATCCGGAGCTAGCGGACTTTACGATTTTTGTGATTGATGTGGCTGAGGGCGATAAAATCCCCAGGAAAGGCGGGC
CAGGAATCACGCGCTCAGACTTGCTTGTCATCAATAAGATTGATTTAGCCCCCTATGTGGGAGCGGACTTGAAAGTCATG
GAAAGGGATTCTAAAAAAATGCGTGGCGAAAAGCCCTTTATTTTTACGAATATCCGCGCTAAAGAAGGTTTAGACGATGT
GATCGCTTGGATCAAACGCAACGCTTTATTGGAAGATTGA

Upstream 100 bases:

>100_bases
GCAGCAAGCGTTCAAAACGACATTAAGGCGATGCAACATGAGAGTTTATACTCGCGCCTTTATATGTCTTGAATTTTAAT
CTCAAATTGAAAGGAATTTT

Downstream 100 bases:

>100_bases
TGAACACTTACGCTCAAGAATCCAAGCTCAGGTTAAAAACCAAAATAGGGGCTGACGGGCGGTGCGTGATTGAAGACAAT
TTTTTCACGCCTCCCTTTAA

Product: urease accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIGVETGGCPHTAIREDASMNLE
AVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVM
ERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNALLED

Sequences:

>Translated_199_residues
MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIGVETGGCPHTAIREDASMNLE
AVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVM
ERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNALLED
>Mature_199_residues
MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIGVETGGCPHTAIREDASMNLE
AVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVM
ERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNALLED

Specific function: Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by ureG [H]

COG id: COG0378

COG function: function code OK; Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR012202
- InterPro:   IPR004400 [H]

Pfam domain/function: PF02492 cobW [H]

EC number: NA

Molecular weight: Translated: 21942; Mature: 21942

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIG
CEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCHHEEE
VETGGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVI
EECCCCCCHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCEEEEEE
DVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEKPFIFTNIRA
ECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHCCCCCEEEEECCH
KEGLDDVIAWIKRNALLED
HCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIG
CEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCHHEEE
VETGGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVI
EECCCCCCHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCEEEEEE
DVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEKPFIFTNIRA
ECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHCCCCCEEEEECCH
KEGLDDVIAWIKRNALLED
HCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA