Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is yjbB [H]

Identifier: 187935756

GI number: 187935756

Start: 1082656

End: 1084257

Strand: Reverse

Name: yjbB [H]

Synonym: CLL_A1058

Alternate gene names: 187935756

Gene position: 1084257-1082656 (Counterclockwise)

Preceding gene: 187934145

Following gene: 187935736

Centisome position: 28.53

GC content: 29.4

Gene sequence:

>1602_bases
GTGAATGGTATAAATATGCTTATTGAATTAATTGGGGGTCTAGGGCTATTTCTCTTTGGTATGAAACTCATGGGAGACGG
GCTTGAAAACGTTGCAGGTGAAAAATTAAAAAGTATTTTAGAAAAAGTAACAAATAATAAATACATGGGAGTTTTTATTG
GAGCTCTTGTAACTGCTGTAATCCAAAGTTCTAGTGCTACAACAGTAATGGTTGTTAGCTTTGTAAATGCCGGTCTTATA
AATCTTATGCAGGCTACTGGCGTTATAATGGGTGCAAATGTCGGAACAACTATAACAGCACAATTAATTTCTTGTAAATT
AGATAATATTGCACCTTTATTTGTAGGCATAGGTTCAATTTCACTGTTAATAACAAGCAAGAAAAAACATCGAGATGTAT
CTTCCATAATATTAGGATTTGGTATATTGTTTCTTGGAATGAATTTTATGTCTAGTGCTATGAAACCGTTAGCTGAATCA
GAAATCTTTTCTCAAGTTTTAGTTTTAATTGGCAACAATAAGCTTTTAGGAGTTTTATGTGGACTTTTAATGACTGCAGT
AGTACAGAGTTCTTCTGCTACAACTGGTATATTAATAGCACTTGCTACAACTGGAGCTATTGATATGAATGTTGCATTAC
CTGTTATATTTGGATGTAATATTGGAACTTGTGTTACAGCACTTTTAGCATCTGCTGGTGGAAATAAAACTGCTAAAAAA
GCTGGATTAATACATCTCTTTTTTAACGTTATAGGTGTGTTAATGTTTATTCCATTTGTAAATCCACTAATTTCATTTAT
AAAAACTATTAATCCTACAGATGTTGCTAGACAAGTTGCAAATGCTCATACTATTTTTAATATTACTAGTACTATAATTT
TGCTTCCTTTGTCAAAATATCTTGTTTTGTTAGCAAATAAACTATTACCAGGCAATGATTCTTTAGAAACAGAAGGAGCA
ATTTATTTAGATAAAAATTTGCTAGATACCCCTATTGTAGCTACTGGACAAGTTGTTAATGAAACAATTAGAATGGGTAA
AATTGCACAAAAAAACATAGAATTAGCTATGAAGGCTTTTTTAATTGAAAATGAAGAATACATAAAGCAAGTATATAGTA
ATGAAAAAATAATAAATACTTTAGAAAAAGAGATAACAGATTATTTAGTTCTATTATCAAATTATGAATTGCCAGATACT
GATAGTAAAATTTTAAGTACAAGCTTTCACATAATTAATGACATAGAGAGAATTGGTGATCATGCAAAAAATATAGTAGA
ATTGGCTACTGAAAAAATTGATGATCATATTATAATCCCACAAGATGCTATTGAAGAACTTCTGAGTATGTATGAACAAA
CTCTTAATGCTTTAACCTTAGCTTTAAAATGTTATGAAAATAGCGATTATACTAACGCTAAACATGTAAAGGAAATTGAA
TTGAAAATAGATACTTGTGAAAAAACTCTTAGAGAAAGTAATATAAAAAGATTAAATCAGAAAAAATGTTCAGCCAACTC
TAGTACAATATTTTTAGATCTAATTAGTAATCTTGAAAGAATTGGTGATCACTCTACTAATATTGCAGAAAGAGTACTTT
AA

Upstream 100 bases:

>100_bases
AATTCCAGAATTTATTTTTAATTTTACTTTTACTTTATTAAAAGATATAATATGTAAATGTAAAAACATAATTACTTTTT
TATTCGAAGGAGAGATATGT

Downstream 100 bases:

>100_bases
TATTTATTATAAAATAACATTCTATTAATATACAATAATTTGAAATTTCTATACTTTTAGTTTATAAATTACTATGATAT
ACTATTTAAGTATTTTTACT

Product: Na/Pi-cotransporter family protein/PhoU family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MNGINMLIELIGGLGLFLFGMKLMGDGLENVAGEKLKSILEKVTNNKYMGVFIGALVTAVIQSSSATTVMVVSFVNAGLI
NLMQATGVIMGANVGTTITAQLISCKLDNIAPLFVGIGSISLLITSKKKHRDVSSIILGFGILFLGMNFMSSAMKPLAES
EIFSQVLVLIGNNKLLGVLCGLLMTAVVQSSSATTGILIALATTGAIDMNVALPVIFGCNIGTCVTALLASAGGNKTAKK
AGLIHLFFNVIGVLMFIPFVNPLISFIKTINPTDVARQVANAHTIFNITSTIILLPLSKYLVLLANKLLPGNDSLETEGA
IYLDKNLLDTPIVATGQVVNETIRMGKIAQKNIELAMKAFLIENEEYIKQVYSNEKIINTLEKEITDYLVLLSNYELPDT
DSKILSTSFHIINDIERIGDHAKNIVELATEKIDDHIIIPQDAIEELLSMYEQTLNALTLALKCYENSDYTNAKHVKEIE
LKIDTCEKTLRESNIKRLNQKKCSANSSTIFLDLISNLERIGDHSTNIAERVL

Sequences:

>Translated_533_residues
MNGINMLIELIGGLGLFLFGMKLMGDGLENVAGEKLKSILEKVTNNKYMGVFIGALVTAVIQSSSATTVMVVSFVNAGLI
NLMQATGVIMGANVGTTITAQLISCKLDNIAPLFVGIGSISLLITSKKKHRDVSSIILGFGILFLGMNFMSSAMKPLAES
EIFSQVLVLIGNNKLLGVLCGLLMTAVVQSSSATTGILIALATTGAIDMNVALPVIFGCNIGTCVTALLASAGGNKTAKK
AGLIHLFFNVIGVLMFIPFVNPLISFIKTINPTDVARQVANAHTIFNITSTIILLPLSKYLVLLANKLLPGNDSLETEGA
IYLDKNLLDTPIVATGQVVNETIRMGKIAQKNIELAMKAFLIENEEYIKQVYSNEKIINTLEKEITDYLVLLSNYELPDT
DSKILSTSFHIINDIERIGDHAKNIVELATEKIDDHIIIPQDAIEELLSMYEQTLNALTLALKCYENSDYTNAKHVKEIE
LKIDTCEKTLRESNIKRLNQKKCSANSSTIFLDLISNLERIGDHSTNIAERVL
>Mature_533_residues
MNGINMLIELIGGLGLFLFGMKLMGDGLENVAGEKLKSILEKVTNNKYMGVFIGALVTAVIQSSSATTVMVVSFVNAGLI
NLMQATGVIMGANVGTTITAQLISCKLDNIAPLFVGIGSISLLITSKKKHRDVSSIILGFGILFLGMNFMSSAMKPLAES
EIFSQVLVLIGNNKLLGVLCGLLMTAVVQSSSATTGILIALATTGAIDMNVALPVIFGCNIGTCVTALLASAGGNKTAKK
AGLIHLFFNVIGVLMFIPFVNPLISFIKTINPTDVARQVANAHTIFNITSTIILLPLSKYLVLLANKLLPGNDSLETEGA
IYLDKNLLDTPIVATGQVVNETIRMGKIAQKNIELAMKAFLIENEEYIKQVYSNEKIINTLEKEITDYLVLLSNYELPDT
DSKILSTSFHIINDIERIGDHAKNIVELATEKIDDHIIIPQDAIEELLSMYEQTLNALTLALKCYENSDYTNAKHVKEIE
LKIDTCEKTLRESNIKRLNQKKCSANSSTIFLDLISNLERIGDHSTNIAERVL

Specific function: Unknown

COG id: COG1283

COG function: function code P; Na+/phosphate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqeW [H]

Homologues:

Organism=Escherichia coli, GI1790451, Length=535, Percent_Identity=25.7943925233645, Blast_Score=177, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003841
- InterPro:   IPR004633 [H]

Pfam domain/function: PF02690 Na_Pi_cotrans [H]

EC number: NA

Molecular weight: Translated: 57786; Mature: 57786

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGINMLIELIGGLGLFLFGMKLMGDGLENVAGEKLKSILEKVTNNKYMGVFIGALVTAV
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IQSSSATTVMVVSFVNAGLINLMQATGVIMGANVGTTITAQLISCKLDNIAPLFVGIGSI
HHCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCE
SLLITSKKKHRDVSSIILGFGILFLGMNFMSSAMKPLAESEIFSQVLVLIGNNKLLGVLC
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GLLMTAVVQSSSATTGILIALATTGAIDMNVALPVIFGCNIGTCVTALLASAGGNKTAKK
HHHHHHHHHCCCCCCEEEEEEECCCCEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCHHHH
AGLIHLFFNVIGVLMFIPFVNPLISFIKTINPTDVARQVANAHTIFNITSTIILLPLSKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLLANKLLPGNDSLETEGAIYLDKNLLDTPIVATGQVVNETIRMGKIAQKNIELAMKAF
HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIENEEYIKQVYSNEKIINTLEKEITDYLVLLSNYELPDTDSKILSTSFHIINDIERIGD
HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
HAKNIVELATEKIDDHIIIPQDAIEELLSMYEQTLNALTLALKCYENSDYTNAKHVKEIE
HHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LKIDTCEKTLRESNIKRLNQKKCSANSSTIFLDLISNLERIGDHSTNIAERVL
EEHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCHHHHHCC
>Mature Secondary Structure
MNGINMLIELIGGLGLFLFGMKLMGDGLENVAGEKLKSILEKVTNNKYMGVFIGALVTAV
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IQSSSATTVMVVSFVNAGLINLMQATGVIMGANVGTTITAQLISCKLDNIAPLFVGIGSI
HHCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCE
SLLITSKKKHRDVSSIILGFGILFLGMNFMSSAMKPLAESEIFSQVLVLIGNNKLLGVLC
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GLLMTAVVQSSSATTGILIALATTGAIDMNVALPVIFGCNIGTCVTALLASAGGNKTAKK
HHHHHHHHHCCCCCCEEEEEEECCCCEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCHHHH
AGLIHLFFNVIGVLMFIPFVNPLISFIKTINPTDVARQVANAHTIFNITSTIILLPLSKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLLANKLLPGNDSLETEGAIYLDKNLLDTPIVATGQVVNETIRMGKIAQKNIELAMKAF
HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIENEEYIKQVYSNEKIINTLEKEITDYLVLLSNYELPDTDSKILSTSFHIINDIERIGD
HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
HAKNIVELATEKIDDHIIIPQDAIEELLSMYEQTLNALTLALKCYENSDYTNAKHVKEIE
HHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LKIDTCEKTLRESNIKRLNQKKCSANSSTIFLDLISNLERIGDHSTNIAERVL
EEHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]