| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is malA [H]
Identifier: 187932395
GI number: 187932395
Start: 2149303
End: 2150514
Strand: Reverse
Name: malA [H]
Synonym: CLL_A2055
Alternate gene names: 187932395
Gene position: 2150514-2149303 (Counterclockwise)
Preceding gene: 187935739
Following gene: 187932901
Centisome position: 56.59
GC content: 24.83
Gene sequence:
>1212_bases ATGAAAAATATAAGTTTTAAATTAAACACAATAAGAAGCTTTTCAATGAACCTTTTATTTAATTCATTTGGTAATTCAGT TGTAGGAACAATATACGTTTTGTTTTTGAGTCAAGTGAAAGGTTTTTCAGATAAAGACGTGAGTTTAATGGTTGGATTAA TACCTATCATTACAATACCAAGTTATATATTATGGGGTATTATAATAGATAAGACTAAAAAAGTAGTATTGACAAATAAG ATGGTTATTATAGCTAATATAGTAACATTAATATTATTAATATATGTTGACAATATATATGCATTTTTTATTATAAATTT AATACGTACAGTTTTATTACAACCTGGTGGTATGGTCAATGATGAATATCTTTTAAATTTAGTTAAAGACAATACTGGGA GTTATGGCAGTATAAGAACTTTTGGAACTGTTGGATATGGATTAGGTGGATTAGTATGTTTATTACTTATGGACTACATA GAAATTAGTGGATTATTAATAATCGCTATAATGTCCTTAGCTAGTACACTACTATTTATCTCGAAAATGCCTGAAATTAA TATAGATAAAAGTTTGAAAAAAGGCTATCATAAAACAAAGTTTAAAATAGAGCAACTTGATTTATTAAAAAATATGAAGT ATATGAGATTGATGATTATTTATGTTTTGATGAATGGAACACTGGCTTCAGCAAGTAGTTATGCAATCCCGATGATAATG ATAAAATTAGATGCTCCACAGAATATAATAGGAGTAATGCCATTTATAATGATAGTTTTTGAATTAATATTATTACTTCA AAATAAAAGATTAAATTTTCCTAAAAAAAGAAATAAGTATTTGTTAATAGGTTTAATATTATTAACAATAAGATGGATAA CTATGGGGGTAACTGAATCTTATATTATAATAATTTTAATATCAATTATACATGGTGCTGTTGCAGGAATATTATTACCT ATACAAAATGATATGGTAGAAAAATTTGTTCCTCAAAATCAACAATCAACAGCAATAATGCTACAAACTTTGTTAAGTAG TACAATAGTCCCTTCTATATTAAATATTATACTTGGTTTTTTATTGGAACCATGGGTGATAAAGTCTTTTGGTATTGTAT ATTTAATATGTAATGTAATTACGCTCTTTATGTACATAATCAATTTATTATTCAATAGATATGAAGAAAAGAGAGTTGTA TTTGATAAATAA
Upstream 100 bases:
>100_bases ATTGAATTGGAAGGCTACTCCATATGTATTTTACAAGGAGTAGTTTTATTAATTTCGAGAAAATATAATATTAATGAAAT ATGAGGTTTGATAAAATGTT
Downstream 100 bases:
>100_bases TCATAAGTGTGTACAAGTTAATATTAAGATATAAAGATAGGGACTGTATCAGATTAGAGTTTTTTAAACTCAATCTGATA AGCCCCTTTTTAATTTTCAA
Product: transporter major facilitator family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MKNISFKLNTIRSFSMNLLFNSFGNSVVGTIYVLFLSQVKGFSDKDVSLMVGLIPIITIPSYILWGIIIDKTKKVVLTNK MVIIANIVTLILLIYVDNIYAFFIINLIRTVLLQPGGMVNDEYLLNLVKDNTGSYGSIRTFGTVGYGLGGLVCLLLMDYI EISGLLIIAIMSLASTLLFISKMPEINIDKSLKKGYHKTKFKIEQLDLLKNMKYMRLMIIYVLMNGTLASASSYAIPMIM IKLDAPQNIIGVMPFIMIVFELILLLQNKRLNFPKKRNKYLLIGLILLTIRWITMGVTESYIIIILISIIHGAVAGILLP IQNDMVEKFVPQNQQSTAIMLQTLLSSTIVPSILNIILGFLLEPWVIKSFGIVYLICNVITLFMYIINLLFNRYEEKRVV FDK
Sequences:
>Translated_403_residues MKNISFKLNTIRSFSMNLLFNSFGNSVVGTIYVLFLSQVKGFSDKDVSLMVGLIPIITIPSYILWGIIIDKTKKVVLTNK MVIIANIVTLILLIYVDNIYAFFIINLIRTVLLQPGGMVNDEYLLNLVKDNTGSYGSIRTFGTVGYGLGGLVCLLLMDYI EISGLLIIAIMSLASTLLFISKMPEINIDKSLKKGYHKTKFKIEQLDLLKNMKYMRLMIIYVLMNGTLASASSYAIPMIM IKLDAPQNIIGVMPFIMIVFELILLLQNKRLNFPKKRNKYLLIGLILLTIRWITMGVTESYIIIILISIIHGAVAGILLP IQNDMVEKFVPQNQQSTAIMLQTLLSSTIVPSILNIILGFLLEPWVIKSFGIVYLICNVITLFMYIINLLFNRYEEKRVV FDK >Mature_403_residues MKNISFKLNTIRSFSMNLLFNSFGNSVVGTIYVLFLSQVKGFSDKDVSLMVGLIPIITIPSYILWGIIIDKTKKVVLTNK MVIIANIVTLILLIYVDNIYAFFIINLIRTVLLQPGGMVNDEYLLNLVKDNTGSYGSIRTFGTVGYGLGGLVCLLLMDYI EISGLLIIAIMSLASTLLFISKMPEINIDKSLKKGYHKTKFKIEQLDLLKNMKYMRLMIIYVLMNGTLASASSYAIPMIM IKLDAPQNIIGVMPFIMIVFELILLLQNKRLNFPKKRNKYLLIGLILLTIRWITMGVTESYIIIILISIIHGAVAGILLP IQNDMVEKFVPQNQQSTAIMLQTLLSSTIVPSILNIILGFLLEPWVIKSFGIVYLICNVITLFMYIINLLFNRYEEKRVV FDK
Specific function: High affinity transport of maltose [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lacY/rafB permease family. HcaT subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004750 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45581; Mature: 45581
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNISFKLNTIRSFSMNLLFNSFGNSVVGTIYVLFLSQVKGFSDKDVSLMVGLIPIITIP CCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SYILWGIIIDKTKKVVLTNKMVIIANIVTLILLIYVDNIYAFFIINLIRTVLLQPGGMVN HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DEYLLNLVKDNTGSYGSIRTFGTVGYGLGGLVCLLLMDYIEISGLLIIAIMSLASTLLFI HHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKMPEINIDKSLKKGYHKTKFKIEQLDLLKNMKYMRLMIIYVLMNGTLASASSYAIPMIM HCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE IKLDAPQNIIGVMPFIMIVFELILLLQNKRLNFPKKRNKYLLIGLILLTIRWITMGVTES EEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHH YIIIILISIIHGAVAGILLPIQNDMVEKFVPQNQQSTAIMLQTLLSSTIVPSILNIILGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLEPWVIKSFGIVYLICNVITLFMYIINLLFNRYEEKRVVFDK HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKNISFKLNTIRSFSMNLLFNSFGNSVVGTIYVLFLSQVKGFSDKDVSLMVGLIPIITIP CCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SYILWGIIIDKTKKVVLTNKMVIIANIVTLILLIYVDNIYAFFIINLIRTVLLQPGGMVN HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DEYLLNLVKDNTGSYGSIRTFGTVGYGLGGLVCLLLMDYIEISGLLIIAIMSLASTLLFI HHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKMPEINIDKSLKKGYHKTKFKIEQLDLLKNMKYMRLMIIYVLMNGTLASASSYAIPMIM HCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE IKLDAPQNIIGVMPFIMIVFELILLLQNKRLNFPKKRNKYLLIGLILLTIRWITMGVTES EEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHH YIIIILISIIHGAVAGILLPIQNDMVEKFVPQNQQSTAIMLQTLLSSTIVPSILNIILGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLEPWVIKSFGIVYLICNVITLFMYIINLLFNRYEEKRVVFDK HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8190087 [H]