Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is malA [H]

Identifier: 187932395

GI number: 187932395

Start: 2149303

End: 2150514

Strand: Reverse

Name: malA [H]

Synonym: CLL_A2055

Alternate gene names: 187932395

Gene position: 2150514-2149303 (Counterclockwise)

Preceding gene: 187935739

Following gene: 187932901

Centisome position: 56.59

GC content: 24.83

Gene sequence:

>1212_bases
ATGAAAAATATAAGTTTTAAATTAAACACAATAAGAAGCTTTTCAATGAACCTTTTATTTAATTCATTTGGTAATTCAGT
TGTAGGAACAATATACGTTTTGTTTTTGAGTCAAGTGAAAGGTTTTTCAGATAAAGACGTGAGTTTAATGGTTGGATTAA
TACCTATCATTACAATACCAAGTTATATATTATGGGGTATTATAATAGATAAGACTAAAAAAGTAGTATTGACAAATAAG
ATGGTTATTATAGCTAATATAGTAACATTAATATTATTAATATATGTTGACAATATATATGCATTTTTTATTATAAATTT
AATACGTACAGTTTTATTACAACCTGGTGGTATGGTCAATGATGAATATCTTTTAAATTTAGTTAAAGACAATACTGGGA
GTTATGGCAGTATAAGAACTTTTGGAACTGTTGGATATGGATTAGGTGGATTAGTATGTTTATTACTTATGGACTACATA
GAAATTAGTGGATTATTAATAATCGCTATAATGTCCTTAGCTAGTACACTACTATTTATCTCGAAAATGCCTGAAATTAA
TATAGATAAAAGTTTGAAAAAAGGCTATCATAAAACAAAGTTTAAAATAGAGCAACTTGATTTATTAAAAAATATGAAGT
ATATGAGATTGATGATTATTTATGTTTTGATGAATGGAACACTGGCTTCAGCAAGTAGTTATGCAATCCCGATGATAATG
ATAAAATTAGATGCTCCACAGAATATAATAGGAGTAATGCCATTTATAATGATAGTTTTTGAATTAATATTATTACTTCA
AAATAAAAGATTAAATTTTCCTAAAAAAAGAAATAAGTATTTGTTAATAGGTTTAATATTATTAACAATAAGATGGATAA
CTATGGGGGTAACTGAATCTTATATTATAATAATTTTAATATCAATTATACATGGTGCTGTTGCAGGAATATTATTACCT
ATACAAAATGATATGGTAGAAAAATTTGTTCCTCAAAATCAACAATCAACAGCAATAATGCTACAAACTTTGTTAAGTAG
TACAATAGTCCCTTCTATATTAAATATTATACTTGGTTTTTTATTGGAACCATGGGTGATAAAGTCTTTTGGTATTGTAT
ATTTAATATGTAATGTAATTACGCTCTTTATGTACATAATCAATTTATTATTCAATAGATATGAAGAAAAGAGAGTTGTA
TTTGATAAATAA

Upstream 100 bases:

>100_bases
ATTGAATTGGAAGGCTACTCCATATGTATTTTACAAGGAGTAGTTTTATTAATTTCGAGAAAATATAATATTAATGAAAT
ATGAGGTTTGATAAAATGTT

Downstream 100 bases:

>100_bases
TCATAAGTGTGTACAAGTTAATATTAAGATATAAAGATAGGGACTGTATCAGATTAGAGTTTTTTAAACTCAATCTGATA
AGCCCCTTTTTAATTTTCAA

Product: transporter major facilitator family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKNISFKLNTIRSFSMNLLFNSFGNSVVGTIYVLFLSQVKGFSDKDVSLMVGLIPIITIPSYILWGIIIDKTKKVVLTNK
MVIIANIVTLILLIYVDNIYAFFIINLIRTVLLQPGGMVNDEYLLNLVKDNTGSYGSIRTFGTVGYGLGGLVCLLLMDYI
EISGLLIIAIMSLASTLLFISKMPEINIDKSLKKGYHKTKFKIEQLDLLKNMKYMRLMIIYVLMNGTLASASSYAIPMIM
IKLDAPQNIIGVMPFIMIVFELILLLQNKRLNFPKKRNKYLLIGLILLTIRWITMGVTESYIIIILISIIHGAVAGILLP
IQNDMVEKFVPQNQQSTAIMLQTLLSSTIVPSILNIILGFLLEPWVIKSFGIVYLICNVITLFMYIINLLFNRYEEKRVV
FDK

Sequences:

>Translated_403_residues
MKNISFKLNTIRSFSMNLLFNSFGNSVVGTIYVLFLSQVKGFSDKDVSLMVGLIPIITIPSYILWGIIIDKTKKVVLTNK
MVIIANIVTLILLIYVDNIYAFFIINLIRTVLLQPGGMVNDEYLLNLVKDNTGSYGSIRTFGTVGYGLGGLVCLLLMDYI
EISGLLIIAIMSLASTLLFISKMPEINIDKSLKKGYHKTKFKIEQLDLLKNMKYMRLMIIYVLMNGTLASASSYAIPMIM
IKLDAPQNIIGVMPFIMIVFELILLLQNKRLNFPKKRNKYLLIGLILLTIRWITMGVTESYIIIILISIIHGAVAGILLP
IQNDMVEKFVPQNQQSTAIMLQTLLSSTIVPSILNIILGFLLEPWVIKSFGIVYLICNVITLFMYIINLLFNRYEEKRVV
FDK
>Mature_403_residues
MKNISFKLNTIRSFSMNLLFNSFGNSVVGTIYVLFLSQVKGFSDKDVSLMVGLIPIITIPSYILWGIIIDKTKKVVLTNK
MVIIANIVTLILLIYVDNIYAFFIINLIRTVLLQPGGMVNDEYLLNLVKDNTGSYGSIRTFGTVGYGLGGLVCLLLMDYI
EISGLLIIAIMSLASTLLFISKMPEINIDKSLKKGYHKTKFKIEQLDLLKNMKYMRLMIIYVLMNGTLASASSYAIPMIM
IKLDAPQNIIGVMPFIMIVFELILLLQNKRLNFPKKRNKYLLIGLILLTIRWITMGVTESYIIIILISIIHGAVAGILLP
IQNDMVEKFVPQNQQSTAIMLQTLLSSTIVPSILNIILGFLLEPWVIKSFGIVYLICNVITLFMYIINLLFNRYEEKRVV
FDK

Specific function: High affinity transport of maltose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacY/rafB permease family. HcaT subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR004750 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45581; Mature: 45581

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNISFKLNTIRSFSMNLLFNSFGNSVVGTIYVLFLSQVKGFSDKDVSLMVGLIPIITIP
CCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
SYILWGIIIDKTKKVVLTNKMVIIANIVTLILLIYVDNIYAFFIINLIRTVLLQPGGMVN
HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DEYLLNLVKDNTGSYGSIRTFGTVGYGLGGLVCLLLMDYIEISGLLIIAIMSLASTLLFI
HHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKMPEINIDKSLKKGYHKTKFKIEQLDLLKNMKYMRLMIIYVLMNGTLASASSYAIPMIM
HCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
IKLDAPQNIIGVMPFIMIVFELILLLQNKRLNFPKKRNKYLLIGLILLTIRWITMGVTES
EEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHH
YIIIILISIIHGAVAGILLPIQNDMVEKFVPQNQQSTAIMLQTLLSSTIVPSILNIILGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLEPWVIKSFGIVYLICNVITLFMYIINLLFNRYEEKRVVFDK
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNISFKLNTIRSFSMNLLFNSFGNSVVGTIYVLFLSQVKGFSDKDVSLMVGLIPIITIP
CCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
SYILWGIIIDKTKKVVLTNKMVIIANIVTLILLIYVDNIYAFFIINLIRTVLLQPGGMVN
HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DEYLLNLVKDNTGSYGSIRTFGTVGYGLGGLVCLLLMDYIEISGLLIIAIMSLASTLLFI
HHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKMPEINIDKSLKKGYHKTKFKIEQLDLLKNMKYMRLMIIYVLMNGTLASASSYAIPMIM
HCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
IKLDAPQNIIGVMPFIMIVFELILLLQNKRLNFPKKRNKYLLIGLILLTIRWITMGVTES
EEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHH
YIIIILISIIHGAVAGILLPIQNDMVEKFVPQNQQSTAIMLQTLLSSTIVPSILNIILGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLEPWVIKSFGIVYLICNVITLFMYIINLLFNRYEEKRVVFDK
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8190087 [H]