| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is celD [H]
Identifier: 187935639
GI number: 187935639
Start: 2189492
End: 2189794
Strand: Reverse
Name: celD [H]
Synonym: CLL_A2093
Alternate gene names: 187935639
Gene position: 2189794-2189492 (Counterclockwise)
Preceding gene: 187932855
Following gene: 187934839
Centisome position: 57.62
GC content: 28.71
Gene sequence:
>303_bases ATGGAAGAAAAAATATTTGAAATAATATCACACAGTGGAGATTCAAGAGGATACACTTTTCAAGCTTTAAAAGAGGCAAG AAAAAACAATATGGAAGAAGCAGAAAAACTTATGGATAAAGCAAATGAGGAATTACATTTAGCACATAATACTCAAACGT CTCTTATTCAATGGGAGATAAATGGAAAACCAGTGGAAATATCACTACTTATGGTTCATGCACAAGATCAATTAATGACA GCAATTTCTGAAAATAATTTAGTTAAAGAGTTGATTGAAATGTTTAAACTTATTCATAAATAA
Upstream 100 bases:
>100_bases ATCTATTGATAAGTCAATAAAATTAGTTAATGAATTAATAGAAATAAATAAATGTTATTTACCACAGTTTAAATAAAAAA TAACCAAGGAGGAATTTTAA
Downstream 100 bases:
>100_bases ATTTTATATAATAACTAAAATATAGAGGTTAAATTGGGGGAATTTAATAAAATGAAAATATTAATACAGTTAGCATATAT AATCTTTATAATTATGTTCA
Product: PTS system, Lactose/Cellobiose specific IIA subunit
Products: protein histidine; sugar phosphate
Alternate protein names: EIIA-Cel; EIII-Cel; PTS system cellobiose-specific EIIA component [H]
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MEEKIFEIISHSGDSRGYTFQALKEARKNNMEEAEKLMDKANEELHLAHNTQTSLIQWEINGKPVEISLLMVHAQDQLMT AISENNLVKELIEMFKLIHK
Sequences:
>Translated_100_residues MEEKIFEIISHSGDSRGYTFQALKEARKNNMEEAEKLMDKANEELHLAHNTQTSLIQWEINGKPVEISLLMVHAQDQLMT AISENNLVKELIEMFKLIHK >Mature_100_residues MEEKIFEIISHSGDSRGYTFQALKEARKNNMEEAEKLMDKANEELHLAHNTQTSLIQWEINGKPVEISLLMVHAQDQLMT AISENNLVKELIEMFKLIHK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG1447
COG function: function code G; Phosphotransferase system cellobiose-specific component IIA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788031, Length=94, Percent_Identity=37.2340425531915, Blast_Score=70, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003188 [H]
Pfam domain/function: PF02255 PTS_IIA [H]
EC number: 2.7.1.69
Molecular weight: Translated: 11593; Mature: 11593
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS51095 PTS_EIIA_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEKIFEIISHSGDSRGYTFQALKEARKNNMEEAEKLMDKANEELHLAHNTQTSLIQWEI CCHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEE NGKPVEISLLMVHAQDQLMTAISENNLVKELIEMFKLIHK CCCCEEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MEEKIFEIISHSGDSRGYTFQALKEARKNNMEEAEKLMDKANEELHLAHNTQTSLIQWEI CCHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEE NGKPVEISLLMVHAQDQLMTAISENNLVKELIEMFKLIHK CCCCEEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407820 [H]