| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935218
Identifier: 187935218
GI number: 187935218
Start: 3031509
End: 3032372
Strand: Reverse
Name: 187935218
Synonym: CLL_A2950
Alternate gene names: NA
Gene position: 3032372-3031509 (Counterclockwise)
Preceding gene: 187932525
Following gene: 187934460
Centisome position: 79.79
GC content: 26.27
Gene sequence:
>864_bases ATGAAAATAACCACATTAATAGAAAATACACAGGATAAGGATGAGAAGCTAAAAAATGAACATGGTCTTTCTATGTTTAT TGAAGGAAATAATTGCAATGTCTTATTCGATACTGGAAAAACAGGAGATTTTATTGAAAATGCTAAAAAACTAAATATTG ATCTTAAGAAAACTGATATTTTAGTTTTAAGTCATGCTCATTATGATCATTGTGGTGGGGTTAAAAGATTACTAGAAACC TATGATATAAAACCTAAACTTGTAGTAAGTAAGCATTTTTTTAATAGAACAGATAAGTATCATTATTCTGATGGAAGTCT AAAATCAGATTTTTCAAAAGAACCTGGATATGCATATATAGGAACTGATTTTGATAAAAAATATGTTGAAGATAAAGGAA TTAGAATAGAGAGTTTAGAAAAAGATGTTTTAGAAATATGTGATAATGTTTTTGTATGTTCTAATTTTAATAAATACTAT GATTTTGAAAAAGTAAACCCTAACATGCAACGCAAAGTTAATGATGAATATATAATTGATACATTTGACGAAGAAGTAGC ATTAGGAATAAAAACTAAAAAAGGATTAGTTATATTATTAGGATGTGCACATCCAGGATTTTTAAATATGGTAAAAACTA TAGAAGAAAGAACTAATGAAAAGATAGTAGGTATAATAGGTGGTACACATCTTATAGAAGCTGATGATGAGAGAATAAAA AAATCAGTTGATTATTTAAATAAATCAGGAGTTGAACTATTAGGATTATCACACTGTACTGGTGAAAAAGCAGTTGAAAT TTTTAATAAGGAATGTAAAACTTCATTTACCAATAGAACAGGTACAATAGTAGAATTAGATTAA
Upstream 100 bases:
>100_bases TCTGGATTAGAAGAAATTACAGCAACGGTTCAAGAACTTAATTCTACTGCAGTGCTTCTAAAAGAATTTGCCGCTACAAT ATAAAATGGGAGATGTTAAT
Downstream 100 bases:
>100_bases TTTTTAAACTATAAATCAATTAATAAATTTAATGAGCTATCTTGGAATGATTTTTTAAATCATTAGGTGACGATGGCTCT TTTTTTATTTACATAATAAT
Product: beta-lactamase domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKITTLIENTQDKDEKLKNEHGLSMFIEGNNCNVLFDTGKTGDFIENAKKLNIDLKKTDILVLSHAHYDHCGGVKRLLET YDIKPKLVVSKHFFNRTDKYHYSDGSLKSDFSKEPGYAYIGTDFDKKYVEDKGIRIESLEKDVLEICDNVFVCSNFNKYY DFEKVNPNMQRKVNDEYIIDTFDEEVALGIKTKKGLVILLGCAHPGFLNMVKTIEERTNEKIVGIIGGTHLIEADDERIK KSVDYLNKSGVELLGLSHCTGEKAVEIFNKECKTSFTNRTGTIVELD
Sequences:
>Translated_287_residues MKITTLIENTQDKDEKLKNEHGLSMFIEGNNCNVLFDTGKTGDFIENAKKLNIDLKKTDILVLSHAHYDHCGGVKRLLET YDIKPKLVVSKHFFNRTDKYHYSDGSLKSDFSKEPGYAYIGTDFDKKYVEDKGIRIESLEKDVLEICDNVFVCSNFNKYY DFEKVNPNMQRKVNDEYIIDTFDEEVALGIKTKKGLVILLGCAHPGFLNMVKTIEERTNEKIVGIIGGTHLIEADDERIK KSVDYLNKSGVELLGLSHCTGEKAVEIFNKECKTSFTNRTGTIVELD >Mature_287_residues MKITTLIENTQDKDEKLKNEHGLSMFIEGNNCNVLFDTGKTGDFIENAKKLNIDLKKTDILVLSHAHYDHCGGVKRLLET YDIKPKLVVSKHFFNRTDKYHYSDGSLKSDFSKEPGYAYIGTDFDKKYVEDKGIRIESLEKDVLEICDNVFVCSNFNKYY DFEKVNPNMQRKVNDEYIIDTFDEEVALGIKTKKGLVILLGCAHPGFLNMVKTIEERTNEKIVGIIGGTHLIEADDERIK KSVDYLNKSGVELLGLSHCTGEKAVEIFNKECKTSFTNRTGTIVELD
Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32673; Mature: 32673
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITTLIENTQDKDEKLKNEHGLSMFIEGNNCNVLFDTGKTGDFIENAKKLNIDLKKTDI CEEEEEECCCCCHHHHHHCCCCCEEEEECCCEEEEEECCCCCHHHHCCHHEEEEEEECEE LVLSHAHYDHCGGVKRLLETYDIKPKLVVSKHFFNRTDKYHYSDGSLKSDFSKEPGYAYI EEEECCCCCHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCEEECCCCCCCCCCCCCCEEEE GTDFDKKYVEDKGIRIESLEKDVLEICDNVFVCSNFNKYYDFEKVNPNMQRKVNDEYIID ECCCCHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCHHCCCCCCCCCHHHHCCCCEEEE TFDEEVALGIKTKKGLVILLGCAHPGFLNMVKTIEERTNEKIVGIIGGTHLIEADDERIK CCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHH KSVDYLNKSGVELLGLSHCTGEKAVEIFNKECKTSFTNRTGTIVELD HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MKITTLIENTQDKDEKLKNEHGLSMFIEGNNCNVLFDTGKTGDFIENAKKLNIDLKKTDI CEEEEEECCCCCHHHHHHCCCCCEEEEECCCEEEEEECCCCCHHHHCCHHEEEEEEECEE LVLSHAHYDHCGGVKRLLETYDIKPKLVVSKHFFNRTDKYHYSDGSLKSDFSKEPGYAYI EEEECCCCCHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCEEECCCCCCCCCCCCCCEEEE GTDFDKKYVEDKGIRIESLEKDVLEICDNVFVCSNFNKYYDFEKVNPNMQRKVNDEYIID ECCCCHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCHHCCCCCCCCCHHHHCCCCEEEE TFDEEVALGIKTKKGLVILLGCAHPGFLNMVKTIEERTNEKIVGIIGGTHLIEADDERIK CCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHH KSVDYLNKSGVELLGLSHCTGEKAVEIFNKECKTSFTNRTGTIVELD HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]