| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is hppA [H]
Identifier: 187935138
GI number: 187935138
Start: 3153646
End: 3155673
Strand: Reverse
Name: hppA [H]
Synonym: CLL_A3052
Alternate gene names: 187935138
Gene position: 3155673-3153646 (Counterclockwise)
Preceding gene: 187933016
Following gene: 187934548
Centisome position: 83.04
GC content: 32.94
Gene sequence:
>2028_bases ATGAATCTATTATATGTTTCATTAATAGCTGGTTTTATTGCTCTTATTGTTGTCATTTTTTTAGCAAAGGATATATTGAA AAAAAGCCCTGGAAATGAAAAGATGATTGAAATTTCTGGTTATATTGAAGAAGGTGCAATGGCTTTTTTAAGAAAGGAGT ATTCTTACTTATGTGTCTTTATAGTAGTAGTTGCTATTGCTATACTAGTATTTTTAAATTATAAAACAGCAATAGCATTT GTTGTTGGTGCACTATTTTCAATTATAGCAGGTTATATTGGTATGAGAATAGCTGTAAAATCTAATGTTAGAACAGCCGA GGCTGCAAAATCAGGAATAAAAGAGGCACTATCAGTTGCTTTTTCTGGTGGAACAGTAATGGGATTATGTGTAGTAGGAC TAGGTATAATTGGATTAAGTATTTTTTCAATTGTATTTGATTTAAATGTAGAGTATATAACAGGATTTGGATTAGGTGCA TCATCTATTGCTTTATTTGCAAGAGTTGGTGGTGGAATTTATACTAAAGCAGCTGATGTTGGAGCAGATTTAGTGGGGAA AGTTGAAGCTGGTATTCCAGAAGATGATCCAAGAAATCCAGCTGTTATAGCAGATAATGTTGGTGATAATGTTGGAGACG TTGCAGGTATGGGAGCAGATTTATTTGAATCTTATGTTGGATCAATTATATCTGCAATAACTCTAGGCGCTGTATTGGTT AGTTCATGGGGAAAAGAAATAGTAATTTTCCCATTAGTTTTATCTTCAATAGGTATTTTAGCATCATTAATAGGAATTGT ATTTGTTAAATCATATAAAGGAGATAATCCTCAAAAGGCTTTAAATTTAGGTAGTACAATTTCAGGTGCAATAGTATTAG TAGCAGGATTTATAGCTTGTAAATATTTACTTGGAAGCTATAAAATTTTCTTACCTGTAATTGCTGGATTACTAATAGGG TTATTAATTGGTAAAATTACTGAATTCTATACTTCTGCTGATTATAAATCAGTTAAATTTATTGCAAATGAGTCAGAGAC AGGTCCTGCAACAAATATTATAGCAGGATTATCAGTTGGAATGAGATCAACAGTTGTACCTATACTATTAATCGCTGTAG GAATAATAGTATCATTTTTTGCAATAGGTGGAGCAAAAGATACTGCATTAGGCTTATATGGTATAGCACTATCAGCAGTG GGCATGTTATCAACAACAGCTATAACAGTTGCTGTTGATGCATATGGACCAATAGCAGATAATGCTGGAGGAATAGCAGA AATGTGTGATTTAGATGATAGCATCAGAGAGATAACTGATAAATTAGATTCTGTTGGTAATACAACAGCAGCAATAGGAA AAGGATTTGCTATTGGTTCGGCAGCACTTACTGCTTTGGCACTTTTTGCATCATATTCACAAATAGTAAATTTAGAAACT ATAAATTTACTTAATCCATTAACATTAGTTGGAGTTTTAATTGGGGGTATGTTACCATTCCTTTTTGCTGCATTAACTAT GCAATCAGTAGGAAAAGCCGCAACTCAAATGGTTGAGGAAGTAAGAAGACAATTTAAGGAAAATGATGGGATATTAAAAG GAACTCAAAAACCAGATTATTCAAAATGTGTTGAAATATCAACTAATGCAGCATTAAAAGAAATGATACTTCCAGGAATA TTGGCTATAGCAGTGCCATTGTTAGTTGGAATATTATTAGGGACTGAAGCACTAGCAGGAGTAATTGGTGGTGGTGTAGT TACAGGTGTTATGCTTGCAATTATGATGGCAAATGCTGGTGGTGCATGGGATAATGCTAAGAAATACATTGAAAGTGGAG TACATGGTGGAAAAGGAAGTTATGCTCATAAAGCAGGGGTCGTAGGAGATACAGTTGGAGATCCATTTAAGGATACTTCA GGACCATCTATGAATATCTTAATAAAACTTATGACAATTGTTTCAGTAGTATTTGCACCAGTAATATTAAAATACGGTGG AATTTTGATAAATCTATTTATTAAATAA
Upstream 100 bases:
>100_bases CTAAATAGACAAATAGAATTATTTTATTGTCATGAAATACAAAAATTATACATAAGAATAAATAATATATAAAAACCAAT AAAATATAAGGAGGAAATAT
Downstream 100 bases:
>100_bases ACAATTAGATTAAGCTATATTTTAGAGAGAAAGATTGCAAGTTAAATTTATTTATAAATTAATAATTTGCAGTCTTTTTT TGTTAAAATGAAATAAATTT
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound sodium-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; Na(+)-PPase [H]
Number of amino acids: Translated: 675; Mature: 675
Protein sequence:
>675_residues MNLLYVSLIAGFIALIVVIFLAKDILKKSPGNEKMIEISGYIEEGAMAFLRKEYSYLCVFIVVVAIAILVFLNYKTAIAF VVGALFSIIAGYIGMRIAVKSNVRTAEAAKSGIKEALSVAFSGGTVMGLCVVGLGIIGLSIFSIVFDLNVEYITGFGLGA SSIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSIISAITLGAVLV SSWGKEIVIFPLVLSSIGILASLIGIVFVKSYKGDNPQKALNLGSTISGAIVLVAGFIACKYLLGSYKIFLPVIAGLLIG LLIGKITEFYTSADYKSVKFIANESETGPATNIIAGLSVGMRSTVVPILLIAVGIIVSFFAIGGAKDTALGLYGIALSAV GMLSTTAITVAVDAYGPIADNAGGIAEMCDLDDSIREITDKLDSVGNTTAAIGKGFAIGSAALTALALFASYSQIVNLET INLLNPLTLVGVLIGGMLPFLFAALTMQSVGKAATQMVEEVRRQFKENDGILKGTQKPDYSKCVEISTNAALKEMILPGI LAIAVPLLVGILLGTEALAGVIGGGVVTGVMLAIMMANAGGAWDNAKKYIESGVHGGKGSYAHKAGVVGDTVGDPFKDTS GPSMNILIKLMTIVSVVFAPVILKYGGILINLFIK
Sequences:
>Translated_675_residues MNLLYVSLIAGFIALIVVIFLAKDILKKSPGNEKMIEISGYIEEGAMAFLRKEYSYLCVFIVVVAIAILVFLNYKTAIAF VVGALFSIIAGYIGMRIAVKSNVRTAEAAKSGIKEALSVAFSGGTVMGLCVVGLGIIGLSIFSIVFDLNVEYITGFGLGA SSIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSIISAITLGAVLV SSWGKEIVIFPLVLSSIGILASLIGIVFVKSYKGDNPQKALNLGSTISGAIVLVAGFIACKYLLGSYKIFLPVIAGLLIG LLIGKITEFYTSADYKSVKFIANESETGPATNIIAGLSVGMRSTVVPILLIAVGIIVSFFAIGGAKDTALGLYGIALSAV GMLSTTAITVAVDAYGPIADNAGGIAEMCDLDDSIREITDKLDSVGNTTAAIGKGFAIGSAALTALALFASYSQIVNLET INLLNPLTLVGVLIGGMLPFLFAALTMQSVGKAATQMVEEVRRQFKENDGILKGTQKPDYSKCVEISTNAALKEMILPGI LAIAVPLLVGILLGTEALAGVIGGGVVTGVMLAIMMANAGGAWDNAKKYIESGVHGGKGSYAHKAGVVGDTVGDPFKDTS GPSMNILIKLMTIVSVVFAPVILKYGGILINLFIK >Mature_675_residues MNLLYVSLIAGFIALIVVIFLAKDILKKSPGNEKMIEISGYIEEGAMAFLRKEYSYLCVFIVVVAIAILVFLNYKTAIAF VVGALFSIIAGYIGMRIAVKSNVRTAEAAKSGIKEALSVAFSGGTVMGLCVVGLGIIGLSIFSIVFDLNVEYITGFGLGA SSIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSIISAITLGAVLV SSWGKEIVIFPLVLSSIGILASLIGIVFVKSYKGDNPQKALNLGSTISGAIVLVAGFIACKYLLGSYKIFLPVIAGLLIG LLIGKITEFYTSADYKSVKFIANESETGPATNIIAGLSVGMRSTVVPILLIAVGIIVSFFAIGGAKDTALGLYGIALSAV GMLSTTAITVAVDAYGPIADNAGGIAEMCDLDDSIREITDKLDSVGNTTAAIGKGFAIGSAALTALALFASYSQIVNLET INLLNPLTLVGVLIGGMLPFLFAALTMQSVGKAATQMVEEVRRQFKENDGILKGTQKPDYSKCVEISTNAALKEMILPGI LAIAVPLLVGILLGTEALAGVIGGGVVTGVMLAIMMANAGGAWDNAKKYIESGVHGGKGSYAHKAGVVGDTVGDPFKDTS GPSMNILIKLMTIVSVVFAPVILKYGGILINLFIK
Specific function: Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane [H]
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004131 [H]
Pfam domain/function: PF03030 H_PPase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 69725; Mature: 69725
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLYVSLIAGFIALIVVIFLAKDILKKSPGNEKMIEISGYIEEGAMAFLRKEYSYLCVF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH IVVVAIAILVFLNYKTAIAFVVGALFSIIAGYIGMRIAVKSNVRTAEAAKSGIKEALSVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHH FSGGTVMGLCVVGLGIIGLSIFSIVFDLNVEYITGFGLGASSIALFARVGGGIYTKAADV HCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHCCCCEEHHHHH GADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSIISAITLGAVLV CHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH SSWGKEIVIFPLVLSSIGILASLIGIVFVKSYKGDNPQKALNLGSTISGAIVLVAGFIAC HCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHH KYLLGSYKIFLPVIAGLLIGLLIGKITEFYTSADYKSVKFIANESETGPATNIIAGLSVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH MRSTVVPILLIAVGIIVSFFAIGGAKDTALGLYGIALSAVGMLSTTAITVAVDAYGPIAD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCC NAGGIAEMCDLDDSIREITDKLDSVGNTTAAIGKGFAIGSAALTALALFASYSQIVNLET CCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHH INLLNPLTLVGVLIGGMLPFLFAALTMQSVGKAATQMVEEVRRQFKENDGILKGTQKPDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCH SKCVEISTNAALKEMILPGILAIAVPLLVGILLGTEALAGVIGGGVVTGVMLAIMMANAG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GAWDNAKKYIESGVHGGKGSYAHKAGVVGDTVGDPFKDTSGPSMNILIKLMTIVSVVFAP CCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VILKYGGILINLFIK HHHHHCCCCEEEEEC >Mature Secondary Structure MNLLYVSLIAGFIALIVVIFLAKDILKKSPGNEKMIEISGYIEEGAMAFLRKEYSYLCVF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH IVVVAIAILVFLNYKTAIAFVVGALFSIIAGYIGMRIAVKSNVRTAEAAKSGIKEALSVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHH FSGGTVMGLCVVGLGIIGLSIFSIVFDLNVEYITGFGLGASSIALFARVGGGIYTKAADV HCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHCCCCEEHHHHH GADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSIISAITLGAVLV CHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH SSWGKEIVIFPLVLSSIGILASLIGIVFVKSYKGDNPQKALNLGSTISGAIVLVAGFIAC HCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHH KYLLGSYKIFLPVIAGLLIGLLIGKITEFYTSADYKSVKFIANESETGPATNIIAGLSVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH MRSTVVPILLIAVGIIVSFFAIGGAKDTALGLYGIALSAVGMLSTTAITVAVDAYGPIAD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCC NAGGIAEMCDLDDSIREITDKLDSVGNTTAAIGKGFAIGSAALTALALFASYSQIVNLET CCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHH INLLNPLTLVGVLIGGMLPFLFAALTMQSVGKAATQMVEEVRRQFKENDGILKGTQKPDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCH SKCVEISTNAALKEMILPGILAIAVPLLVGILLGTEALAGVIGGGVVTGVMLAIMMANAG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GAWDNAKKYIESGVHGGKGSYAHKAGVVGDTVGDPFKDTSGPSMNILIKLMTIVSVVFAP CCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VILKYGGILINLFIK HHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]