| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is secG
Identifier: 187933016
GI number: 187933016
Start: 3156144
End: 3156377
Strand: Reverse
Name: secG
Synonym: CLL_A3053
Alternate gene names: NA
Gene position: 3156377-3156144 (Counterclockwise)
Preceding gene: 187932521
Following gene: 187935138
Centisome position: 83.06
GC content: 26.92
Gene sequence:
>234_bases ATGCAAAGTATGTTAATGGGTGTAGAAGTACTATTAGGTTTATTGATAGTAGTAACTATATTTATGCAACCTAGTAAAGC TGATGCTTTAAGTGGATTAATACAAGGTGGATCAAAAGATACATTCTTTTCAAAAAATAAAGCAAGAACTAAGGAAGTAA TGCTTGTAAGATTAACTTGGATTTTTACAGGATTATTTGCACTTAATACATTAATATTAAACTTTATGAAATAA
Upstream 100 bases:
>100_bases GCTTTACATTAATGAAAAGTTGTAATAAAATAAATGTTATGTTACAATTTTAATAAATATGTTATTTTGTAACGAGTTAA CTATATAGGAGGGATTACCT
Downstream 100 bases:
>100_bases AAGTAAGGACTACTTAATGAGAAGTAGTCCTTACTTTTATTTTTTAGCAAATTATAAAATGAAAAATCAATAAAGATGAC AATATTTGATTAAGAATTAC
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MQSMLMGVEVLLGLLIVVTIFMQPSKADALSGLIQGGSKDTFFSKNKARTKEVMLVRLTWIFTGLFALNTLILNFMK
Sequences:
>Translated_77_residues MQSMLMGVEVLLGLLIVVTIFMQPSKADALSGLIQGGSKDTFFSKNKARTKEVMLVRLTWIFTGLFALNTLILNFMK >Mature_77_residues MQSMLMGVEVLLGLLIVVTIFMQPSKADALSGLIQGGSKDTFFSKNKARTKEVMLVRLTWIFTGLFALNTLILNFMK
Specific function: Unknown
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8569; Mature: 8569
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.8 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.8 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSMLMGVEVLLGLLIVVTIFMQPSKADALSGLIQGGSKDTFFSKNKARTKEVMLVRLTW CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH IFTGLFALNTLILNFMK HHHHHHHHHHHHHHHCC >Mature Secondary Structure MQSMLMGVEVLLGLLIVVTIFMQPSKADALSGLIQGGSKDTFFSKNKARTKEVMLVRLTW CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH IFTGLFALNTLILNFMK HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA