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The map label for this gene is hopD2 [H]

Identifier: 187934926

GI number: 187934926

Start: 1055444

End: 1056370

Strand: Reverse

Name: hopD2 [H]

Synonym: CLL_A1037

Alternate gene names: 187934926

Gene position: 1056370-1055444 (Counterclockwise)

Preceding gene: 187933875

Following gene: 187934167

Centisome position: 27.8

GC content: 25.35

Gene sequence:

>927_bases
ATGTACAAAAAAGCAAAACTCAAATTATATATTCCAATGCTATTATTAATTACTATTTTTTCTTCATTCTTTTTAAACTT
TAATATAGCTTTAGCGTTTAATGAACCCACTAATAAAAGCGATGTACACATTATAGTTGATAACTTAAGAACAAATAAAA
TTCCAAGTAATTTTAGAACTACTTCTAATTTAACAAATATACAAAACAAATCCTCTTTAAATTTAAAGGGATTAGAAACT
CTAAACACCTCTGGAAGTCAACAATTTTCTAAAGATAATTTAGACATTTTAACAAAATCTATAGACAGTACACTTCCTAT
ATTAATCATTGATTTAAGACAAGAATCTCATGGATTTGTAAATGAATGTCCTATTAGTTTTGCAAATGAACAAAATGATG
CTAATTTAGGCCTTAGCAAATCGGCAGTAACATTTACAGAAAAAAAAGATTTAAAAAGTATCAAATTAAATACTCCATTA
ACTTTTTATAATCATCCAGAAATAAATGTAGTTCCAAAAGAAGTTTTATCTGAAAAACAGCTTACAAAAGCTTACTCTTT
GAATTATTCAAGAGTTCCAGTAACAGATACAAAATTACCTACAAATGAAATGATCGACTGTTTTATAAATATTGTAAAAG
AATGTTCAAAGAATAATTGGATACATTTTCACTGTAAAGCAGGCTTTGGGAGAACAACTACTTTTATGATTATGTACGAT
ATGATGAAAAATTATAAAAATGCTACCTCTGATGAAATTGTAAAAAGACAATTGGTTTTAGCTAATTTCAATGAAAAAGA
AATATCTCAATTTTCATCAAATGATCGCATTGATTTTTTAAATAAATTCTATAATTATTGTAAAGATATAAATGGTAACT
TTGATACCACTTGGAGTTCGTGGTTAAACAATTCTCAAAAACATTAA

Upstream 100 bases:

>100_bases
TATTTAGCTACCCTTGTTAATCTTTTGAATATAAATTGTTTTTCTGAGACATATTAAGTTTATACGATAAATCTTAATTA
ACAAAATGAGGTGATTTTTA

Downstream 100 bases:

>100_bases
GTAAATTTTTATATATAAAAAGAAAGCACATCATAAAATTGATTATGATGTGCCTTAAAATTTGTATTATTCTTGTTCTT
GCTTTTCTTGTTTTGGAAGT

Product: protein tyrosine phosphatase II superfamily protein

Products: NA

Alternate protein names: Tyrosine-protein phosphatase hopPtoD2 [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MYKKAKLKLYIPMLLLITIFSSFFLNFNIALAFNEPTNKSDVHIIVDNLRTNKIPSNFRTTSNLTNIQNKSSLNLKGLET
LNTSGSQQFSKDNLDILTKSIDSTLPILIIDLRQESHGFVNECPISFANEQNDANLGLSKSAVTFTEKKDLKSIKLNTPL
TFYNHPEINVVPKEVLSEKQLTKAYSLNYSRVPVTDTKLPTNEMIDCFINIVKECSKNNWIHFHCKAGFGRTTTFMIMYD
MMKNYKNATSDEIVKRQLVLANFNEKEISQFSSNDRIDFLNKFYNYCKDINGNFDTTWSSWLNNSQKH

Sequences:

>Translated_308_residues
MYKKAKLKLYIPMLLLITIFSSFFLNFNIALAFNEPTNKSDVHIIVDNLRTNKIPSNFRTTSNLTNIQNKSSLNLKGLET
LNTSGSQQFSKDNLDILTKSIDSTLPILIIDLRQESHGFVNECPISFANEQNDANLGLSKSAVTFTEKKDLKSIKLNTPL
TFYNHPEINVVPKEVLSEKQLTKAYSLNYSRVPVTDTKLPTNEMIDCFINIVKECSKNNWIHFHCKAGFGRTTTFMIMYD
MMKNYKNATSDEIVKRQLVLANFNEKEISQFSSNDRIDFLNKFYNYCKDINGNFDTTWSSWLNNSQKH
>Mature_308_residues
MYKKAKLKLYIPMLLLITIFSSFFLNFNIALAFNEPTNKSDVHIIVDNLRTNKIPSNFRTTSNLTNIQNKSSLNLKGLET
LNTSGSQQFSKDNLDILTKSIDSTLPILIIDLRQESHGFVNECPISFANEQNDANLGLSKSAVTFTEKKDLKSIKLNTPL
TFYNHPEINVVPKEVLSEKQLTKAYSLNYSRVPVTDTKLPTNEMIDCFINIVKECSKNNWIHFHCKAGFGRTTTFMIMYD
MMKNYKNATSDEIVKRQLVLANFNEKEISQFSSNDRIDFLNKFYNYCKDINGNFDTTWSSWLNNSQKH

Specific function: Effector showing tyrosine-phosphatase activity required for host defense suppression. Functions inside plant cells causing suppression of HR (hypersensitive response), PR1 gene expression and oxidative burst probably by interfering with a MAPK (mitogen- a

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Note=Secreted via type III secretion system (TTSS) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tyrosine-protein phosphatase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000387
- InterPro:   IPR016130
- InterPro:   IPR000242 [H]

Pfam domain/function: PF00102 Y_phosphatase [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 35439; Mature: 35439

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKAKLKLYIPMLLLITIFSSFFLNFNIALAFNEPTNKSDVHIIVDNLRTNKIPSNFRT
CCCCCEEEEHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCC
TSNLTNIQNKSSLNLKGLETLNTSGSQQFSKDNLDILTKSIDSTLPILIIDLRQESHGFV
CCCHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCH
NECPISFANEQNDANLGLSKSAVTFTEKKDLKSIKLNTPLTFYNHPEINVVPKEVLSEKQ
HHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCEEEECCCCCEECHHHHHHHHH
LTKAYSLNYSRVPVTDTKLPTNEMIDCFINIVKECSKNNWIHFHCKAGFGRTTTFMIMYD
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH
MMKNYKNATSDEIVKRQLVLANFNEKEISQFSSNDRIDFLNKFYNYCKDINGNFDTTWSS
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
WLNNSQKH
HHCCCCCC
>Mature Secondary Structure
MYKKAKLKLYIPMLLLITIFSSFFLNFNIALAFNEPTNKSDVHIIVDNLRTNKIPSNFRT
CCCCCEEEEHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCC
TSNLTNIQNKSSLNLKGLETLNTSGSQQFSKDNLDILTKSIDSTLPILIIDLRQESHGFV
CCCHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCH
NECPISFANEQNDANLGLSKSAVTFTEKKDLKSIKLNTPLTFYNHPEINVVPKEVLSEKQ
HHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCEEEECCCCCEECHHHHHHHHH
LTKAYSLNYSRVPVTDTKLPTNEMIDCFINIVKECSKNNWIHFHCKAGFGRTTTFMIMYD
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH
MMKNYKNATSDEIVKRQLVLANFNEKEISQFSSNDRIDFLNKFYNYCKDINGNFDTTWSS
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
WLNNSQKH
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12437299; 12828636; 12928499 [H]