| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934649
Identifier: 187934649
GI number: 187934649
Start: 159882
End: 160580
Strand: Reverse
Name: 187934649
Synonym: CLL_A0143
Alternate gene names: NA
Gene position: 160580-159882 (Counterclockwise)
Preceding gene: 187933070
Following gene: 187933881
Centisome position: 4.23
GC content: 26.75
Gene sequence:
>699_bases ATGAAAATAGCAATAATTTCAGATATACACGGAAATATTTATTCACTTATTAGAGCATTACAAGATATAGATAATGAAAA GGTTGATTCAATAATTTGTTTGGGTGATTTAGTTGGATACGGTCCACATCCAAATGAAGTTATAGCAATGATCAAAAGAA GAAATATTCTTTGCATTCAAGGAAACTATGATAAATCTGTAATAGATAACGATTATACTTTTATAAGAGAAACTGAAATA AATAGTTTTTCTCTTCCTTGGACATACAATGAACTTAGAGCACAAAATAGATATTTTTTGAGTAATTTACCATCATCTAT TAGTCTTAACATTCAAGGCAAAAAAATTATATTTGTTCATGGTAGTCCAAGCATACTTAATCAATATTTATTTGAAGACG CTGACGATACTAAAAATATAATAGAAAACATGGCAGAAGATATTTTGGTTTGTGCTCATACCCATATTCCTTCTATTAAA AATTTTGATGAAAAAATGTATATAAATTGCGGTAGTATTGGAAAACCTAAAATAGGCAGACCTAATCTTACTTATTGTCT ATTGGATATAAATGAACTTAGTGGAGTAAAAGCTCAGATAAAAGAATTAGAATACGAGTATCCAAGAATCGTAAAAGATA TGACTTTATTAAACTTTCCTTCAAAATTAATTAAAAATTTTGAAAAAGGTTTAGAATAA
Upstream 100 bases:
>100_bases TATTCTATAAAATTTATTATATAACTTTACATCAAAAAATAATATTATAATGATATAATATATTTAACAATTTTATATTT AGACATAAGGGGAGTTAGTT
Downstream 100 bases:
>100_bases CTCTGTTGCATTTGTAAAAGAAATACTGTAAAATTATACACAATGTAATATGGTAATTACTTTGATGAGAAGAGTACGTT TAGAATGTAGTCTTAGCGAG
Product: Ser/Thr protein phosphatase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MKIAIISDIHGNIYSLIRALQDIDNEKVDSIICLGDLVGYGPHPNEVIAMIKRRNILCIQGNYDKSVIDNDYTFIRETEI NSFSLPWTYNELRAQNRYFLSNLPSSISLNIQGKKIIFVHGSPSILNQYLFEDADDTKNIIENMAEDILVCAHTHIPSIK NFDEKMYINCGSIGKPKIGRPNLTYCLLDINELSGVKAQIKELEYEYPRIVKDMTLLNFPSKLIKNFEKGLE
Sequences:
>Translated_232_residues MKIAIISDIHGNIYSLIRALQDIDNEKVDSIICLGDLVGYGPHPNEVIAMIKRRNILCIQGNYDKSVIDNDYTFIRETEI NSFSLPWTYNELRAQNRYFLSNLPSSISLNIQGKKIIFVHGSPSILNQYLFEDADDTKNIIENMAEDILVCAHTHIPSIK NFDEKMYINCGSIGKPKIGRPNLTYCLLDINELSGVKAQIKELEYEYPRIVKDMTLLNFPSKLIKNFEKGLE >Mature_232_residues MKIAIISDIHGNIYSLIRALQDIDNEKVDSIICLGDLVGYGPHPNEVIAMIKRRNILCIQGNYDKSVIDNDYTFIRETEI NSFSLPWTYNELRAQNRYFLSNLPSSISLNIQGKKIIFVHGSPSILNQYLFEDADDTKNIIENMAEDILVCAHTHIPSIK NFDEKMYINCGSIGKPKIGRPNLTYCLLDINELSGVKAQIKELEYEYPRIVKDMTLLNFPSKLIKNFEKGLE
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR011152 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 26519; Mature: 26519
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIISDIHGNIYSLIRALQDIDNEKVDSIICLGDLVGYGPHPNEVIAMIKRRNILCIQ CEEEEEECCCCHHHHHHHHHHHCCCHHHHHEEEEHHHHCCCCCHHHHHHHHHCCCEEEEE GNYDKSVIDNDYTFIRETEINSFSLPWTYNELRAQNRYFLSNLPSSISLNIQGKKIIFVH CCCCCCEECCCCEEEEECCCCCEECCCCHHHHHHCCCHHHHCCCCCEEEEECCCEEEEEE GSPSILNQYLFEDADDTKNIIENMAEDILVCAHTHIPSIKNFDEKMYINCGSIGKPKIGR CCHHHHHHHHHCCCCHHHHHHHHHHHHHEEHHCCCCCCCCCCCCEEEEECCCCCCCCCCC PNLTYCLLDINELSGVKAQIKELEYEYPRIVKDMTLLNFPSKLIKNFEKGLE CCCEEEEEECCHHCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MKIAIISDIHGNIYSLIRALQDIDNEKVDSIICLGDLVGYGPHPNEVIAMIKRRNILCIQ CEEEEEECCCCHHHHHHHHHHHCCCHHHHHEEEEHHHHCCCCCHHHHHHHHHCCCEEEEE GNYDKSVIDNDYTFIRETEINSFSLPWTYNELRAQNRYFLSNLPSSISLNIQGKKIIFVH CCCCCCEECCCCEEEEECCCCCEECCCCHHHHHHCCCHHHHCCCCCEEEEECCCEEEEEE GSPSILNQYLFEDADDTKNIIENMAEDILVCAHTHIPSIKNFDEKMYINCGSIGKPKIGR CCHHHHHHHHHCCCCHHHHHHHHHHHHHEEHHCCCCCCCCCCCCEEEEECCCCCCCCCCC PNLTYCLLDINELSGVKAQIKELEYEYPRIVKDMTLLNFPSKLIKNFEKGLE CCCEEEEEECCHHCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]