| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934300
Identifier: 187934300
GI number: 187934300
Start: 199069
End: 200073
Strand: Reverse
Name: 187934300
Synonym: CLL_A0184
Alternate gene names: NA
Gene position: 200073-199069 (Counterclockwise)
Preceding gene: 187932548
Following gene: 187933070
Centisome position: 5.26
GC content: 25.07
Gene sequence:
>1005_bases ATGATAAAAAAAACCTTAAGCTTACTTTTATTATGTTCAACTTTATTTGTAGTAGGCTGTACAAAACAAGAAGAAAAGCA AAATGTCAATAAATCAAATTCTGACATTTCTTCATCTAATAACTTAAGTTCCAATGCGATTTCACCTTTTATATTAACTG ATTCAACATCTTTTCGTTGTCCCTTTGTATTTAGCAATGAAATGTTAATATTCCCCAATCCTGATGAAAGCAATAGAATT TCAATGATAAATGCACCTCTTCCAAAAGATATATTAAAAAGTAGCGACTTAAATGATCTAGTAGATTATTATACTGGTGA TTTAGCTTTAGTAAATAATACTCTTTATTTTGCAGATGGAAGTAATTCTAACAGTTTATCTTCTATAAACATTCCTGATA AAACATATACTTCTTTAAATAAAGATTCTGTTTATAGTTTAATTGCTTCAAATGACAAATTATTCTATATAAACAAAAAT GATAATCAGAAGTTATATAGTTATGATACAAATAGCAACATTTCTTCTGCCTTATCATTAGATAGTGTTGGCTCATTCAT AGTTAATGGCGATTTCTTAATATATCAAAACTTAAGTGATAATTCAAAACTTTATTACGTTAAAAATGATGGCACCAATA GAAACAAATTGACTGACTATACTGCTAATAGTTTCATTCCTTTTGACGGAGAAATCTTATTTTTTAACACATCCGATAAC GAAACATTATATTCATTAAATATAACAACTTTAGAAGCTAAAAGAATTTCTACTATACGTGGAGAGAATTTAAAGTGTAT AAATAATCAATTATTCTTCATAAATAATGATGACTCAAATTACTTATATTCATTATCTGTAGACTTGCCTAATTCTAAAG TTGATTCAAAACCTTATATTTCTGAATCATTAAACAATTACCATTTAACTAATGCAGGAATATTCTATGAAAAAGCTATA AATATTAATAATATATATTATTATGAATTTTCTACAAAAAATTAA
Upstream 100 bases:
>100_bases ATATTCTTTACTCTTTGTGTAAGTTATCATAATATTAATACTATAAATGTTAATAAAAATTATAAAATTAATCTTTAATA CATAAACAGGAGGATTTTTC
Downstream 100 bases:
>100_bases ACAAAAAGACTGATGTCATTATAGCTACATCAGTCTTTTAATTATTACATTATTAATTACAGTTAATCTCAATATACTTA CATATATATTAAACTCTATA
Product: basic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MIKKTLSLLLLCSTLFVVGCTKQEEKQNVNKSNSDISSSNNLSSNAISPFILTDSTSFRCPFVFSNEMLIFPNPDESNRI SMINAPLPKDILKSSDLNDLVDYYTGDLALVNNTLYFADGSNSNSLSSINIPDKTYTSLNKDSVYSLIASNDKLFYINKN DNQKLYSYDTNSNISSALSLDSVGSFIVNGDFLIYQNLSDNSKLYYVKNDGTNRNKLTDYTANSFIPFDGEILFFNTSDN ETLYSLNITTLEAKRISTIRGENLKCINNQLFFINNDDSNYLYSLSVDLPNSKVDSKPYISESLNNYHLTNAGIFYEKAI NINNIYYYEFSTKN
Sequences:
>Translated_334_residues MIKKTLSLLLLCSTLFVVGCTKQEEKQNVNKSNSDISSSNNLSSNAISPFILTDSTSFRCPFVFSNEMLIFPNPDESNRI SMINAPLPKDILKSSDLNDLVDYYTGDLALVNNTLYFADGSNSNSLSSINIPDKTYTSLNKDSVYSLIASNDKLFYINKN DNQKLYSYDTNSNISSALSLDSVGSFIVNGDFLIYQNLSDNSKLYYVKNDGTNRNKLTDYTANSFIPFDGEILFFNTSDN ETLYSLNITTLEAKRISTIRGENLKCINNQLFFINNDDSNYLYSLSVDLPNSKVDSKPYISESLNNYHLTNAGIFYEKAI NINNIYYYEFSTKN >Mature_334_residues MIKKTLSLLLLCSTLFVVGCTKQEEKQNVNKSNSDISSSNNLSSNAISPFILTDSTSFRCPFVFSNEMLIFPNPDESNRI SMINAPLPKDILKSSDLNDLVDYYTGDLALVNNTLYFADGSNSNSLSSINIPDKTYTSLNKDSVYSLIASNDKLFYINKN DNQKLYSYDTNSNISSALSLDSVGSFIVNGDFLIYQNLSDNSKLYYVKNDGTNRNKLTDYTANSFIPFDGEILFFNTSDN ETLYSLNITTLEAKRISTIRGENLKCINNQLFFINNDDSNYLYSLSVDLPNSKVDSKPYISESLNNYHLTNAGIFYEKAI NINNIYYYEFSTKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37666; Mature: 37666
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKTLSLLLLCSTLFVVGCTKQEEKQNVNKSNSDISSSNNLSSNAISPFILTDSTSFRC CCHHHHHHHHHHHHHHEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEE PFVFSNEMLIFPNPDESNRISMINAPLPKDILKSSDLNDLVDYYTGDLALVNNTLYFADG EEEECCCEEEECCCCCCCEEEEEECCCCHHHHCCCCHHHHHHHHCCCEEEEEEEEEEEEC SNSNSLSSINIPDKTYTSLNKDSVYSLIASNDKLFYINKNDNQKLYSYDTNSNISSALSL CCCCCEEEEECCCHHHHCCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCHHHEEH DSVGSFIVNGDFLIYQNLSDNSKLYYVKNDGTNRNKLTDYTANSFIPFDGEILFFNTSDN HHCCCEEECCCEEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCC ETLYSLNITTLEAKRISTIRGENLKCINNQLFFINNDDSNYLYSLSVDLPNSKVDSKPYI CEEEEEEEEEEEHHHHHEECCCCEEEECCEEEEEECCCCCEEEEEEEECCCCCCCCCCCH SESLNNYHLTNAGIFYEKAININNIYYYEFSTKN HHCCCCEEEECCCEEEEEEECCCEEEEEEEECCC >Mature Secondary Structure MIKKTLSLLLLCSTLFVVGCTKQEEKQNVNKSNSDISSSNNLSSNAISPFILTDSTSFRC CCHHHHHHHHHHHHHHEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEE PFVFSNEMLIFPNPDESNRISMINAPLPKDILKSSDLNDLVDYYTGDLALVNNTLYFADG EEEECCCEEEECCCCCCCEEEEEECCCCHHHHCCCCHHHHHHHHCCCEEEEEEEEEEEEC SNSNSLSSINIPDKTYTSLNKDSVYSLIASNDKLFYINKNDNQKLYSYDTNSNISSALSL CCCCCEEEEECCCHHHHCCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCHHHEEH DSVGSFIVNGDFLIYQNLSDNSKLYYVKNDGTNRNKLTDYTANSFIPFDGEILFFNTSDN HHCCCEEECCCEEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCC ETLYSLNITTLEAKRISTIRGENLKCINNQLFFINNDDSNYLYSLSVDLPNSKVDSKPYI CEEEEEEEEEEEHHHHHEECCCCEEEECCEEEEEECCCCCEEEEEEEECCCCCCCCCCCH SESLNNYHLTNAGIFYEKAININNIYYYEFSTKN HHCCCCEEEECCCEEEEEEECCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA