| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is corA [H]
Identifier: 187932548
GI number: 187932548
Start: 205989
End: 206936
Strand: Reverse
Name: corA [H]
Synonym: CLL_A0194
Alternate gene names: 187932548
Gene position: 206936-205989 (Counterclockwise)
Preceding gene: 187935776
Following gene: 187934300
Centisome position: 5.45
GC content: 25.84
Gene sequence:
>948_bases TTGATTCAAATTTATAAAAGTCAGAGTGAATTCGATCCAAGTTTGAAACCTATTGATAGTATTGAAAATGGTTGTTGGAT AAACATTGTAGCTCCATCTGAAGAAGAATTAATTCTGGTATCAAAGAAAACTGGAATTTCTATTGATTTTCTAAAGGCAG CACTAGATGATGAAGAAACTTCTAGAATTGATATTGAAGATGATGCCATATTAGTTATAGTCGATATACCATTCACAGAA ATGGAGGAAAATTCTTTAACATATGATACTTATCCATTAGCTATAATACATACTGATAAATTATTAGTTACTATATGTTT AAAAAATAGTAAAATAATAACTGACTTTGCTAATGCTAGAATAAAATCATTTTTTACATTTAAAAAATCAAGGTTTATAT TGCAAATATTAAATAGAATATCTACTTACTATTTACTTTACTTAAGACAAATAGATAAAAAAAGTTTAATGATAGAGAAA AGATTACATAAATCTATGAAAAATAGAGAACTTATTCAGCTTCATTCATTAGAAAAATCTCTTGTATATTTCTCAACTTC ATTAAAAGCTAATGAGATAACCTTGGAAAAAATGTTAAAATTAGAAATGATGCAAAAATATGAAGAAGATAAAGATGTCT TAGAAGATGTCATTATTGAAAATAAGCAAGCTATAGAAATGACAGAAATATATAGCAATATTTTGGCGAGTACAATGGAC TTCTTTGCTTCAGTTATTTCAAATAACTTAAATATAGTTATGAAAGTATTAGCATCTGTAACTATACTGATGGCAATCCC TACTATTATAAGTGGAATATTCGGTATGAATGTTATGTTACCTTTATCTGATAATAATCCCCATGCATTTTCAATAGTTA TGATGTTAACGCTTGGAATATGCTTCATAGTAGCATTCATCTTATATAAAAAAGATATGTTTAATTAA
Upstream 100 bases:
>100_bases TTTAATGGCTATATTCTCATGTTAATTTATTATAGTATATTCGTAATATCTTTATTATAATAGTATAATGATATAATAAA GATATTAGGAGGTGATTTTA
Downstream 100 bases:
>100_bases GATACAACCTATATTTATAGACATTTTTTTCTGCCTATTATATAGGTTCTTTTTTTACTTTTTTTGGTAATTTATAAAAT CATATCTTATATGTTTAGAG
Product: magnesium and cobalt transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MIQIYKSQSEFDPSLKPIDSIENGCWINIVAPSEEELILVSKKTGISIDFLKAALDDEETSRIDIEDDAILVIVDIPFTE MEENSLTYDTYPLAIIHTDKLLVTICLKNSKIITDFANARIKSFFTFKKSRFILQILNRISTYYLLYLRQIDKKSLMIEK RLHKSMKNRELIQLHSLEKSLVYFSTSLKANEITLEKMLKLEMMQKYEEDKDVLEDVIIENKQAIEMTEIYSNILASTMD FFASVISNNLNIVMKVLASVTILMAIPTIISGIFGMNVMLPLSDNNPHAFSIVMMLTLGICFIVAFILYKKDMFN
Sequences:
>Translated_315_residues MIQIYKSQSEFDPSLKPIDSIENGCWINIVAPSEEELILVSKKTGISIDFLKAALDDEETSRIDIEDDAILVIVDIPFTE MEENSLTYDTYPLAIIHTDKLLVTICLKNSKIITDFANARIKSFFTFKKSRFILQILNRISTYYLLYLRQIDKKSLMIEK RLHKSMKNRELIQLHSLEKSLVYFSTSLKANEITLEKMLKLEMMQKYEEDKDVLEDVIIENKQAIEMTEIYSNILASTMD FFASVISNNLNIVMKVLASVTILMAIPTIISGIFGMNVMLPLSDNNPHAFSIVMMLTLGICFIVAFILYKKDMFN >Mature_315_residues MIQIYKSQSEFDPSLKPIDSIENGCWINIVAPSEEELILVSKKTGISIDFLKAALDDEETSRIDIEDDAILVIVDIPFTE MEENSLTYDTYPLAIIHTDKLLVTICLKNSKIITDFANARIKSFFTFKKSRFILQILNRISTYYLLYLRQIDKKSLMIEK RLHKSMKNRELIQLHSLEKSLVYFSTSLKANEITLEKMLKLEMMQKYEEDKDVLEDVIIENKQAIEMTEIYSNILASTMD FFASVISNNLNIVMKVLASVTILMAIPTIISGIFGMNVMLPLSDNNPHAFSIVMMLTLGICFIVAFILYKKDMFN
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 36192; Mature: 36192
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQIYKSQSEFDPSLKPIDSIENGCWINIVAPSEEELILVSKKTGISIDFLKAALDDEET CEEEECCCCCCCCCCCCHHHCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHCCCCCC SRIDIEDDAILVIVDIPFTEMEENSLTYDTYPLAIIHTDKLLVTICLKNSKIITDFANAR CEEEECCCEEEEEEECCCCCCCCCCCEECCCEEEEEECCCEEEEEEECCCEEEHHHHHHH IKSFFTFKKSRFILQILNRISTYYLLYLRQIDKKSLMIEKRLHKSMKNRELIQLHSLEKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LVYFSTSLKANEITLEKMLKLEMMQKYEEDKDVLEDVIIENKQAIEMTEIYSNILASTMD HEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FFASVISNNLNIVMKVLASVTILMAIPTIISGIFGMNVMLPLSDNNPHAFSIVMMLTLGI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHH CFIVAFILYKKDMFN HHHHHHHHHHHHCCC >Mature Secondary Structure MIQIYKSQSEFDPSLKPIDSIENGCWINIVAPSEEELILVSKKTGISIDFLKAALDDEET CEEEECCCCCCCCCCCCHHHCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHCCCCCC SRIDIEDDAILVIVDIPFTEMEENSLTYDTYPLAIIHTDKLLVTICLKNSKIITDFANAR CEEEECCCEEEEEEECCCCCCCCCCCEECCCEEEEEECCCEEEEEEECCCEEEHHHHHHH IKSFFTFKKSRFILQILNRISTYYLLYLRQIDKKSLMIEKRLHKSMKNRELIQLHSLEKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LVYFSTSLKANEITLEKMLKLEMMQKYEEDKDVLEDVIIENKQAIEMTEIYSNILASTMD HEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FFASVISNNLNIVMKVLASVTILMAIPTIISGIFGMNVMLPLSDNNPHAFSIVMMLTLGI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHH CFIVAFILYKKDMFN HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]