| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933500
Identifier: 187933500
GI number: 187933500
Start: 2103047
End: 2104237
Strand: Reverse
Name: 187933500
Synonym: CLL_A2013
Alternate gene names: NA
Gene position: 2104237-2103047 (Counterclockwise)
Preceding gene: 187935400
Following gene: 187933785
Centisome position: 55.37
GC content: 24.27
Gene sequence:
>1191_bases ATGGCGTATATTAATTTTAAAGAAGAGAAATATGTAGCTAATAAGGAATTGAGAAATAGAAAAAAGAATAATAGTAAGTT ATTTGAAGAATATATGGAAAGTAAAGATTTAGGAAGAGAATATGTAGCTGATAAGGAGCTAAGCTTTAAGGAATTTCAAG AGAAACATTTTGGAAATATAAGAATAGTAGATGAAGATGAATTTTTAGTGATAGAAAATAAAGATGTATTATGTTCTATA TTTAATAATTGTAGTTTTAATAATATTAAATTTAAAGAATGTAAGTTTATAGGGTGTACTTTTAATGACTGTAAGTTTCA TAGCGGAGGCGTAATATTTGAAAATTGTATATTTGTTAAAGAAGATAGTAGTAAGAAACCTACATTAAACAATAAAGAAA ATTTTTCTTGCTGTTTTAATAAGTGCAGTATATATGCTAAATTTACTGCATCAACTTTGTCTTATGGAATATTCCAAGAG TGCATAATACATAATACTTTATTTGAGTTGAGTGATATGAATAATGTAATTATCATTGATTCAGAACTTAACAAAATCGT CATTTCAGATTCAAATTTAGTAGGAATAAAGGTAGTTAATACATATATGGTAGATTTTGAGTTTAATGATAAGTTACAAA GTAAATTAGATGAAAAATCTTTTTTTGATAAAATTCCAATAAGAGAAAAAACTAGAGAGGAATTTGAAGGATTATATATG ATTTATGAGGTGATAGGAAATAAATGTAGGGAAAATAATCTTAAAAATAACTTTGGAGAATATTATTACATATGTAAAAA GATGCAAAGAAAAACATTGGATTTTATACCTAAAATATTTTCATACATCTATGATTTAACTTGTGGTTATGGAGAAAGAC CATTGTATTCTATAGTGTCTTCTTTAGGTATTATAATAATCTTTGCTTTATTATATATGTTTACTGGATTTGATTATAAT GGAATTAATATAAATTATAATTTAAATAATTTAGTATATAATGATATAAAATTAATATCAAGTAATTTATTAAAATCATT TACATATAGCGTATATGTTTTTTCAGCTGTTGGATCTAATGAGATTACACCAACCGTTGTTTCTGAGGTTATTGGAGATA TGGAAATAATTATTGGGATAATAATGATGGGAATAGGAGTTGGAGCGGTTACACGAAAATTAGTGAGATAA
Upstream 100 bases:
>100_bases TTATTTATATACAAAAATAAAATAATAATTTACTTAAAAATTTAATATTAAAAGCAGAAAAAAGCATCTAATTTGTTTGA AATAATAATCGGAGGATATT
Downstream 100 bases:
>100_bases AAGAAGTGGAGATGAATGAAATAAGGGAGTTTTATTTAATGATTCATCTGTAAAAAGTAAATCTATAGTTTATTTTAATA GTTGATCAGTTCTCATCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MAYINFKEEKYVANKELRNRKKNNSKLFEEYMESKDLGREYVADKELSFKEFQEKHFGNIRIVDEDEFLVIENKDVLCSI FNNCSFNNIKFKECKFIGCTFNDCKFHSGGVIFENCIFVKEDSSKKPTLNNKENFSCCFNKCSIYAKFTASTLSYGIFQE CIIHNTLFELSDMNNVIIIDSELNKIVISDSNLVGIKVVNTYMVDFEFNDKLQSKLDEKSFFDKIPIREKTREEFEGLYM IYEVIGNKCRENNLKNNFGEYYYICKKMQRKTLDFIPKIFSYIYDLTCGYGERPLYSIVSSLGIIIIFALLYMFTGFDYN GININYNLNNLVYNDIKLISSNLLKSFTYSVYVFSAVGSNEITPTVVSEVIGDMEIIIGIIMMGIGVGAVTRKLVR
Sequences:
>Translated_396_residues MAYINFKEEKYVANKELRNRKKNNSKLFEEYMESKDLGREYVADKELSFKEFQEKHFGNIRIVDEDEFLVIENKDVLCSI FNNCSFNNIKFKECKFIGCTFNDCKFHSGGVIFENCIFVKEDSSKKPTLNNKENFSCCFNKCSIYAKFTASTLSYGIFQE CIIHNTLFELSDMNNVIIIDSELNKIVISDSNLVGIKVVNTYMVDFEFNDKLQSKLDEKSFFDKIPIREKTREEFEGLYM IYEVIGNKCRENNLKNNFGEYYYICKKMQRKTLDFIPKIFSYIYDLTCGYGERPLYSIVSSLGIIIIFALLYMFTGFDYN GININYNLNNLVYNDIKLISSNLLKSFTYSVYVFSAVGSNEITPTVVSEVIGDMEIIIGIIMMGIGVGAVTRKLVR >Mature_395_residues AYINFKEEKYVANKELRNRKKNNSKLFEEYMESKDLGREYVADKELSFKEFQEKHFGNIRIVDEDEFLVIENKDVLCSIF NNCSFNNIKFKECKFIGCTFNDCKFHSGGVIFENCIFVKEDSSKKPTLNNKENFSCCFNKCSIYAKFTASTLSYGIFQEC IIHNTLFELSDMNNVIIIDSELNKIVISDSNLVGIKVVNTYMVDFEFNDKLQSKLDEKSFFDKIPIREKTREEFEGLYMI YEVIGNKCRENNLKNNFGEYYYICKKMQRKTLDFIPKIFSYIYDLTCGYGERPLYSIVSSLGIIIIFALLYMFTGFDYNG ININYNLNNLVYNDIKLISSNLLKSFTYSVYVFSAVGSNEITPTVVSEVIGDMEIIIGIIMMGIGVGAVTRKLVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45957; Mature: 45826
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYINFKEEKYVANKELRNRKKNNSKLFEEYMESKDLGREYVADKELSFKEFQEKHFGNI CCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHCCCE RIVDEDEFLVIENKDVLCSIFNNCSFNNIKFKECKFIGCTFNDCKFHSGGVIFENCIFVK EEEECCCEEEEECCCHHHHHHCCCCCCCEEEEEEEEEECCCCCCEECCCCEEEEEEEEEE EDSSKKPTLNNKENFSCCFNKCSIYAKFTASTLSYGIFQECIIHNTLFELSDMNNVIIID CCCCCCCCCCCCCCHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE SELNKIVISDSNLVGIKVVNTYMVDFEFNDKLQSKLDEKSFFDKIPIREKTREEFEGLYM CCCCEEEEECCCEEEEEEEEEEEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH IYEVIGNKCRENNLKNNFGEYYYICKKMQRKTLDFIPKIFSYIYDLTCGYGERPLYSIVS HHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH SLGIIIIFALLYMFTGFDYNGININYNLNNLVYNDIKLISSNLLKSFTYSVYVFSAVGSN HHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCC EITPTVVSEVIGDMEIIIGIIMMGIGVGAVTRKLVR CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure AYINFKEEKYVANKELRNRKKNNSKLFEEYMESKDLGREYVADKELSFKEFQEKHFGNI CEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHCCCE RIVDEDEFLVIENKDVLCSIFNNCSFNNIKFKECKFIGCTFNDCKFHSGGVIFENCIFVK EEEECCCEEEEECCCHHHHHHCCCCCCCEEEEEEEEEECCCCCCEECCCCEEEEEEEEEE EDSSKKPTLNNKENFSCCFNKCSIYAKFTASTLSYGIFQECIIHNTLFELSDMNNVIIID CCCCCCCCCCCCCCHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE SELNKIVISDSNLVGIKVVNTYMVDFEFNDKLQSKLDEKSFFDKIPIREKTREEFEGLYM CCCCEEEEECCCEEEEEEEEEEEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH IYEVIGNKCRENNLKNNFGEYYYICKKMQRKTLDFIPKIFSYIYDLTCGYGERPLYSIVS HHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH SLGIIIIFALLYMFTGFDYNGININYNLNNLVYNDIKLISSNLLKSFTYSVYVFSAVGSN HHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCC EITPTVVSEVIGDMEIIIGIIMMGIGVGAVTRKLVR CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA