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The map label for this gene is oppA [H]

Identifier: 187932806

GI number: 187932806

Start: 2586007

End: 2587680

Strand: Reverse

Name: oppA [H]

Synonym: CLL_A2494

Alternate gene names: 187932806

Gene position: 2587680-2586007 (Counterclockwise)

Preceding gene: 187934957

Following gene: 187934323

Centisome position: 68.09

GC content: 31.48

Gene sequence:

>1674_bases
ATGAAAAAGAACAAACTTAAAAAGTTGCTTGCTGTAACTTTAGCTTTAACTTTAGGGATATCAGTTTTGGCAGGTTGTGG
AAAGTCAGGTGCAAACAACACAAAAGCAGATGGTCAAGTTATGACTTATAACTTGAATGCAGATCCTAAAACTTTAGATC
CAGCATTAAATAATGCAGTTGATGGGGCAATAATGCTAGTAAATACATTTGAAGGTCTATGTAAATTAGATGAAAATAAT
AAAGCTATTCCAGGAGTAGCAGAAAAATGGGATGTTTCAGATGATGGAACAGTATATACATTCCATTTAAAAGATACTAA
ATGGTCAAATGGAGAGACTGTTACAGCTCAAGACTTTGAATATGCATGGAAAAGGGTAATAAATCCTAAAACAGCAGCAG
AGTATGCATATCAAATGAGTTATTTAAAAAATGCTACTGAATACAATCAAAATAAAGATGTTGATGGAGATGGTAAAGTA
GCTACAGCAGATGAGGTTGGTGTTAAAGCTATTGATGATAAGACATTAGAAGTAACTTTACATGAAGCATGTCCGTACTT
TTTAGAATTAACATCATTTCCATGTTACTTCCCAGTTAACAAAGCTTTAGTTGAATCAAACCCAACTTGGGCAAATACTG
CTGAGACATATGTATCAAATGGTCCTTTTAAAATGACTAAATATGCAATAAAAGATGAAATAGTATTAGAAAAGAATGAA
AATTATTATGATACAAAGAATGTTAAACTTGATAAACTTAATGTAAAATTAGTTACAGAAGAAACTTCTGCCTGGGCAAG
TTATCAATCAGGTGAATTTGATATGGTAGATGTTGTTCCATTATCAGAGATTCAAACTGCTGTTAAAGATGGTAGTGCTA
AAATATTTGAACAATTAGGAACTTATTTCTATTGTGTGAATGTATCTGAAAAAGCTAAAACTGTAAATCCAGAAGCAGCA
AAGGCATTATCAGACGCAAAGGTAAGAAAAGCTTTAGCTTTAGCTATTGATAGACCTTCATTAGTTGAAAATGTTACTAA
AGCTGAACAAATACCAGCATATAGTTTTGTTCCAGAAGGTATTTTAGATAAAGAAGGAAAAGATTTTGCTAGTAAAGAGT
ATTTTAAACCAGAAGGTAATATTGAAGAAGCTAAAAAGTTATTAGCTGAAGCAGGATATCCGAATGGTGAAGGATTCCCA
GCGATAGTATTAACTTTTAATCCAGAAAAAGGACATGGAACTATTGCTCAAGCAGTACAAGATATGTGGAAAAATAATTT
AGGTGTAAATGTAGAACTTCAAAGTCAAGAATGGAAAGTATTCCAAACAACCAGAGATAATAAAGATTATTTAATTGCTA
GACATGGATGGGTTGGTGATTATGTCGATCCAATGACATTCTTAGAAATGTGGATTAGTACTTCTGGACAAAATAATGCA
GGATATAATAATCCTAAATATGATGAATTAATAAAGGAATCAAAAACAGAAAAAGACGATGCTAAGAGAATGGAAATATT
ACATCAAGCTGAAAATATATTAATGGAAGATATGCCAATAATTCCAGTATATTATGAGACTCAAGCAAAAGGTGTAAAAG
ATTATGTGAAAGATGTTAGAGTATCACCACTAGGATTTATATACTTTGATAAAGCTTATATAGACGGAAAGTAA

Upstream 100 bases:

>100_bases
TTTAATAAATATTAATAAATAAAAATTAAAAAATGATATTAGTGTGTTGCAATAAGGACGCTATTAAATCGTTTATAAAA
ATAAGGGGGATAATATAATT

Downstream 100 bases:

>100_bases
TTTAGCACATTATTATTGCTTCAAATGTATATGGATTATGCTCCATATACATATGAAGCAATTTTTAATTATTATAAGGC
TAGATTTTATATAATTATTT

Product: oligopeptide ABC transporter periplasmic oligopeptide-binding protein

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MKKNKLKKLLAVTLALTLGISVLAGCGKSGANNTKADGQVMTYNLNADPKTLDPALNNAVDGAIMLVNTFEGLCKLDENN
KAIPGVAEKWDVSDDGTVYTFHLKDTKWSNGETVTAQDFEYAWKRVINPKTAAEYAYQMSYLKNATEYNQNKDVDGDGKV
ATADEVGVKAIDDKTLEVTLHEACPYFLELTSFPCYFPVNKALVESNPTWANTAETYVSNGPFKMTKYAIKDEIVLEKNE
NYYDTKNVKLDKLNVKLVTEETSAWASYQSGEFDMVDVVPLSEIQTAVKDGSAKIFEQLGTYFYCVNVSEKAKTVNPEAA
KALSDAKVRKALALAIDRPSLVENVTKAEQIPAYSFVPEGILDKEGKDFASKEYFKPEGNIEEAKKLLAEAGYPNGEGFP
AIVLTFNPEKGHGTIAQAVQDMWKNNLGVNVELQSQEWKVFQTTRDNKDYLIARHGWVGDYVDPMTFLEMWISTSGQNNA
GYNNPKYDELIKESKTEKDDAKRMEILHQAENILMEDMPIIPVYYETQAKGVKDYVKDVRVSPLGFIYFDKAYIDGK

Sequences:

>Translated_557_residues
MKKNKLKKLLAVTLALTLGISVLAGCGKSGANNTKADGQVMTYNLNADPKTLDPALNNAVDGAIMLVNTFEGLCKLDENN
KAIPGVAEKWDVSDDGTVYTFHLKDTKWSNGETVTAQDFEYAWKRVINPKTAAEYAYQMSYLKNATEYNQNKDVDGDGKV
ATADEVGVKAIDDKTLEVTLHEACPYFLELTSFPCYFPVNKALVESNPTWANTAETYVSNGPFKMTKYAIKDEIVLEKNE
NYYDTKNVKLDKLNVKLVTEETSAWASYQSGEFDMVDVVPLSEIQTAVKDGSAKIFEQLGTYFYCVNVSEKAKTVNPEAA
KALSDAKVRKALALAIDRPSLVENVTKAEQIPAYSFVPEGILDKEGKDFASKEYFKPEGNIEEAKKLLAEAGYPNGEGFP
AIVLTFNPEKGHGTIAQAVQDMWKNNLGVNVELQSQEWKVFQTTRDNKDYLIARHGWVGDYVDPMTFLEMWISTSGQNNA
GYNNPKYDELIKESKTEKDDAKRMEILHQAENILMEDMPIIPVYYETQAKGVKDYVKDVRVSPLGFIYFDKAYIDGK
>Mature_557_residues
MKKNKLKKLLAVTLALTLGISVLAGCGKSGANNTKADGQVMTYNLNADPKTLDPALNNAVDGAIMLVNTFEGLCKLDENN
KAIPGVAEKWDVSDDGTVYTFHLKDTKWSNGETVTAQDFEYAWKRVINPKTAAEYAYQMSYLKNATEYNQNKDVDGDGKV
ATADEVGVKAIDDKTLEVTLHEACPYFLELTSFPCYFPVNKALVESNPTWANTAETYVSNGPFKMTKYAIKDEIVLEKNE
NYYDTKNVKLDKLNVKLVTEETSAWASYQSGEFDMVDVVPLSEIQTAVKDGSAKIFEQLGTYFYCVNVSEKAKTVNPEAA
KALSDAKVRKALALAIDRPSLVENVTKAEQIPAYSFVPEGILDKEGKDFASKEYFKPEGNIEEAKKLLAEAGYPNGEGFP
AIVLTFNPEKGHGTIAQAVQDMWKNNLGVNVELQSQEWKVFQTTRDNKDYLIARHGWVGDYVDPMTFLEMWISTSGQNNA
GYNNPKYDELIKESKTEKDDAKRMEILHQAENILMEDMPIIPVYYETQAKGVKDYVKDVRVSPLGFIYFDKAYIDGK

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=555, Percent_Identity=32.972972972973, Blast_Score=292, Evalue=3e-80,
Organism=Escherichia coli, GI1787495, Length=535, Percent_Identity=36.0747663551402, Blast_Score=288, Evalue=8e-79,
Organism=Escherichia coli, GI1789397, Length=529, Percent_Identity=31.0018903591682, Blast_Score=254, Evalue=1e-68,
Organism=Escherichia coli, GI1789966, Length=579, Percent_Identity=24.3523316062176, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1787052, Length=531, Percent_Identity=22.7871939736347, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1787762, Length=519, Percent_Identity=21.9653179190751, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1787551, Length=493, Percent_Identity=23.1237322515213, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 62175; Mature: 62175

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNKLKKLLAVTLALTLGISVLAGCGKSGANNTKADGQVMTYNLNADPKTLDPALNNAV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCC
DGAIMLVNTFEGLCKLDENNKAIPGVAEKWDVSDDGTVYTFHLKDTKWSNGETVTAQDFE
CCEEEEEEHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECHHH
YAWKRVINPKTAAEYAYQMSYLKNATEYNQNKDVDGDGKVATADEVGVKAIDDKTLEVTL
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHCCCEEECCCEEEEEE
HEACPYFLELTSFPCYFPVNKALVESNPTWANTAETYVSNGPFKMTKYAIKDEIVLEKNE
HHHCCHHHHHCCCCEECCCCHHHHCCCCCCCCCHHHHHCCCCEEEEEEEECCEEEEECCC
NYYDTKNVKLDKLNVKLVTEETSAWASYQSGEFDMVDVVPLSEIQTAVKDGSAKIFEQLG
CEECCCCEEEEEEEEEEEEECCHHHHCCCCCCCCEEEECCHHHHHHHHHCCHHHHHHHCC
TYFYCVNVSEKAKTVNPEAAKALSDAKVRKALALAIDRPSLVENVTKAEQIPAYSFVPEG
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCCC
ILDKEGKDFASKEYFKPEGNIEEAKKLLAEAGYPNGEGFPAIVLTFNPEKGHGTIAQAVQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
DMWKNNLGVNVELQSQEWKVFQTTRDNKDYLIARHGWVGDYVDPMTFLEMWISTSGQNNA
HHHHCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCC
GYNNPKYDELIKESKTEKDDAKRMEILHQAENILMEDMPIIPVYYETQAKGVKDYVKDVR
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCC
VSPLGFIYFDKAYIDGK
CCCEEEEEEEEEEECCC
>Mature Secondary Structure
MKKNKLKKLLAVTLALTLGISVLAGCGKSGANNTKADGQVMTYNLNADPKTLDPALNNAV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCC
DGAIMLVNTFEGLCKLDENNKAIPGVAEKWDVSDDGTVYTFHLKDTKWSNGETVTAQDFE
CCEEEEEEHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECHHH
YAWKRVINPKTAAEYAYQMSYLKNATEYNQNKDVDGDGKVATADEVGVKAIDDKTLEVTL
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHCCCEEECCCEEEEEE
HEACPYFLELTSFPCYFPVNKALVESNPTWANTAETYVSNGPFKMTKYAIKDEIVLEKNE
HHHCCHHHHHCCCCEECCCCHHHHCCCCCCCCCHHHHHCCCCEEEEEEEECCEEEEECCC
NYYDTKNVKLDKLNVKLVTEETSAWASYQSGEFDMVDVVPLSEIQTAVKDGSAKIFEQLG
CEECCCCEEEEEEEEEEEEECCHHHHCCCCCCCCEEEECCHHHHHHHHHCCHHHHHHHCC
TYFYCVNVSEKAKTVNPEAAKALSDAKVRKALALAIDRPSLVENVTKAEQIPAYSFVPEG
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCCC
ILDKEGKDFASKEYFKPEGNIEEAKKLLAEAGYPNGEGFPAIVLTFNPEKGHGTIAQAVQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
DMWKNNLGVNVELQSQEWKVFQTTRDNKDYLIARHGWVGDYVDPMTFLEMWISTSGQNNA
HHHHCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCC
GYNNPKYDELIKESKTEKDDAKRMEILHQAENILMEDMPIIPVYYETQAKGVKDYVKDVR
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCC
VSPLGFIYFDKAYIDGK
CCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]