| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is ulaA [H]
Identifier: 187932714
GI number: 187932714
Start: 3736595
End: 3737944
Strand: Reverse
Name: ulaA [H]
Synonym: CLL_A3530
Alternate gene names: 187932714
Gene position: 3737944-3736595 (Counterclockwise)
Preceding gene: 187934251
Following gene: 187933476
Centisome position: 98.36
GC content: 34.22
Gene sequence:
>1350_bases ATGGGTGGTATTTTAAAAGTTGCAGTAGACTTTTTATCAGAACCAGCGGTGTTAATAGGTATTATAGTTTTAGTTGGATT AGTACTTCAAAAGAAACCAGCTGATGCAATAGTAAAAGCTACATTAAAAGCAATGGTTGGATTTGTAGTTATAGCATCAG CAGCAGGCGTAATCGTTGGATCATTAGAGCCATTTGGAATTATGTTTGAAGCTGGATTTAATATATCAGGGGTTATACCT AACAATGAAGCTGTAGTAGCAATGGCTATGGACAAGTTTGGAACAAACACAGCTTTAATTATGACTTTTGGTATGATAGC TAATATAATAATAGCAAGATTTACAAAGTATAAATACATATTTTTAACAGGTCATCATACATTATTTATGGCATGTATGA TAGCAGTTATATTAGGATCAGCTGGAATGAGTGGAGCTCACTTAATCTTCACAGGTTCATTAGCATTAGGTCTTATAATG ATTTTATCACCAGCTATATTACAACCGTTCATGAAGAAAATCACAGGAAATGATTCTGTTGCACTAGGTCACTTCTCAGG AATTGGTTATGCAGTATCAGCTATAATCGGTAAATTAGTAGGAAAAGATTCAAAATCAACAGAAGAAATGAAAGTTCCTA AATCTCTAAGTTTCTTAAGGGATTCAGTAGTTTCAATATCACTTACAATGTTAGTATTATATGTTGGGGTTGCTATAGCA GCAGGTCCAGAATTTGTAGAAACAGAGTTGTCAGGTGGAAAGAATTTTATAGTTTATTCAATGATTCAAGCATTAACTTT CGCAGCAGGATTTATACTAATCCAAAATGGTGTTAGATTAGTACTTAATGAAATAGTTCCTGCATTTAAGGGGATTTCAA ACAAATTAGTTCCTAATTCAAAACCAGCATTAGATTGTCCGATAGTATTCCCATATGCACCGAATGCCGTACTAATAGGA TTTATCTTCTCATTCTTAGGTGGAGTAGTTTCAATGTTAGTATTAGGAGTATTAGGATTAGTAATCATAATCCCAGGTGT TGTTCCTCACTTCTTCACAGGAGCTACAGCAGCAGTATTTGGTAATGCAACAGGTGGTAGAAGAGGTGCTATGATAGGTT CATTTGTAAATGGAGTTATGATTTCATTCTTACCAGTAGCATTATTACCTGTACTAGGAAATTTAGGTTTTGCTAATTCA ACATTCTCAGATGGTGACTTTGGAATAGTTGGTATATTCCTTGGTAAAGTTCAAGAGTTTGTTGGCGGCGTAGGATTAAC TGCAACATTACTTGGAATAGTTGCGATAATGATAGGTTTAACAATGGTAAGCAAGAAAAAAGAAGCATAA
Upstream 100 bases:
>100_bases GAAAAATTCAAGAAAAAATAGGTCTTTAAAATAATAAAGTGGTAATTTAATTACCACTTTCCAAAAATTAAACATTTAAA TAAGCTTAGGAGGAATTAAA
Downstream 100 bases:
>100_bases AAAATAATAAATATATAATAAAAAAATGAGGAATTTAATTCCTCATTTTTTCAAATATAAAATTGGAGGTAACAATCTAT GAACAAGCAACATTTAGAAA
Product: ascorbate-specific PTS system enzyme IIC
Products: NA
Alternate protein names: Ascorbate-specific PTS system EIIC component [H]
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MGGILKVAVDFLSEPAVLIGIIVLVGLVLQKKPADAIVKATLKAMVGFVVIASAAGVIVGSLEPFGIMFEAGFNISGVIP NNEAVVAMAMDKFGTNTALIMTFGMIANIIIARFTKYKYIFLTGHHTLFMACMIAVILGSAGMSGAHLIFTGSLALGLIM ILSPAILQPFMKKITGNDSVALGHFSGIGYAVSAIIGKLVGKDSKSTEEMKVPKSLSFLRDSVVSISLTMLVLYVGVAIA AGPEFVETELSGGKNFIVYSMIQALTFAAGFILIQNGVRLVLNEIVPAFKGISNKLVPNSKPALDCPIVFPYAPNAVLIG FIFSFLGGVVSMLVLGVLGLVIIIPGVVPHFFTGATAAVFGNATGGRRGAMIGSFVNGVMISFLPVALLPVLGNLGFANS TFSDGDFGIVGIFLGKVQEFVGGVGLTATLLGIVAIMIGLTMVSKKKEA
Sequences:
>Translated_449_residues MGGILKVAVDFLSEPAVLIGIIVLVGLVLQKKPADAIVKATLKAMVGFVVIASAAGVIVGSLEPFGIMFEAGFNISGVIP NNEAVVAMAMDKFGTNTALIMTFGMIANIIIARFTKYKYIFLTGHHTLFMACMIAVILGSAGMSGAHLIFTGSLALGLIM ILSPAILQPFMKKITGNDSVALGHFSGIGYAVSAIIGKLVGKDSKSTEEMKVPKSLSFLRDSVVSISLTMLVLYVGVAIA AGPEFVETELSGGKNFIVYSMIQALTFAAGFILIQNGVRLVLNEIVPAFKGISNKLVPNSKPALDCPIVFPYAPNAVLIG FIFSFLGGVVSMLVLGVLGLVIIIPGVVPHFFTGATAAVFGNATGGRRGAMIGSFVNGVMISFLPVALLPVLGNLGFANS TFSDGDFGIVGIFLGKVQEFVGGVGLTATLLGIVAIMIGLTMVSKKKEA >Mature_448_residues GGILKVAVDFLSEPAVLIGIIVLVGLVLQKKPADAIVKATLKAMVGFVVIASAAGVIVGSLEPFGIMFEAGFNISGVIPN NEAVVAMAMDKFGTNTALIMTFGMIANIIIARFTKYKYIFLTGHHTLFMACMIAVILGSAGMSGAHLIFTGSLALGLIMI LSPAILQPFMKKITGNDSVALGHFSGIGYAVSAIIGKLVGKDSKSTEEMKVPKSLSFLRDSVVSISLTMLVLYVGVAIAA GPEFVETELSGGKNFIVYSMIQALTFAAGFILIQNGVRLVLNEIVPAFKGISNKLVPNSKPALDCPIVFPYAPNAVLIGF IFSFLGGVVSMLVLGVLGLVIIIPGVVPHFFTGATAAVFGNATGGRRGAMIGSFVNGVMISFLPVALLPVLGNLGFANST FSDGDFGIVGIFLGKVQEFVGGVGLTATLLGIVAIMIGLTMVSKKKEA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active- transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3037
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ulaA family [H]
Homologues:
Organism=Escherichia coli, GI87082388, Length=367, Percent_Identity=27.2479564032698, Blast_Score=154, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004703 [H]
Pfam domain/function: PF03611 EIIC-GAT [H]
EC number: NA
Molecular weight: Translated: 46589; Mature: 46458
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGILKVAVDFLSEPAVLIGIIVLVGLVLQKKPADAIVKATLKAMVGFVVIASAAGVIVG CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE SLEPFGIMFEAGFNISGVIPNNEAVVAMAMDKFGTNTALIMTFGMIANIIIARFTKYKYI CCCCCEEEEECCCCEEEECCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCEEEE FLTGHHTLFMACMIAVILGSAGMSGAHLIFTGSLALGLIMILSPAILQPFMKKITGNDSV EEECCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCE ALGHFSGIGYAVSAIIGKLVGKDSKSTEEMKVPKSLSFLRDSVVSISLTMLVLYVGVAIA EEECCCHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGPEFVETELSGGKNFIVYSMIQALTFAAGFILIQNGVRLVLNEIVPAFKGISNKLVPNS CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC KPALDCPIVFPYAPNAVLIGFIFSFLGGVVSMLVLGVLGLVIIIPGVVPHFFTGATAAVF CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC GNATGGRRGAMIGSFVNGVMISFLPVALLPVLGNLGFANSTFSDGDFGIVGIFLGKVQEF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH VGGVGLTATLLGIVAIMIGLTMVSKKKEA HCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GGILKVAVDFLSEPAVLIGIIVLVGLVLQKKPADAIVKATLKAMVGFVVIASAAGVIVG CCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE SLEPFGIMFEAGFNISGVIPNNEAVVAMAMDKFGTNTALIMTFGMIANIIIARFTKYKYI CCCCCEEEEECCCCEEEECCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCEEEE FLTGHHTLFMACMIAVILGSAGMSGAHLIFTGSLALGLIMILSPAILQPFMKKITGNDSV EEECCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCE ALGHFSGIGYAVSAIIGKLVGKDSKSTEEMKVPKSLSFLRDSVVSISLTMLVLYVGVAIA EEECCCHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGPEFVETELSGGKNFIVYSMIQALTFAAGFILIQNGVRLVLNEIVPAFKGISNKLVPNS CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC KPALDCPIVFPYAPNAVLIGFIFSFLGGVVSMLVLGVLGLVIIIPGVVPHFFTGATAAVF CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC GNATGGRRGAMIGSFVNGVMISFLPVALLPVLGNLGFANSTFSDGDFGIVGIFLGKVQEF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH VGGVGLTATLLGIVAIMIGLTMVSKKKEA HCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]