| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934251
Identifier: 187934251
GI number: 187934251
Start: 3738016
End: 3738291
Strand: Reverse
Name: 187934251
Synonym: CLL_A3531
Alternate gene names: NA
Gene position: 3738291-3738016 (Counterclockwise)
Preceding gene: 187933648
Following gene: 187932714
Centisome position: 98.37
GC content: 31.52
Gene sequence:
>276_bases ATGAAAAAGATTATGGCAGTTTGTGGATCAGGTTTAGGATCAAGTTTTATGGTGGAAATGAACATTACGGATGTATTAAG AGAATTAGGCGTAGATGATCAATATGAAGCAAATCACACATCTTTAGCTGACGTAACAGCATCAGATGCAGATATATTTG TAACAGGAATAGATTTAGCAGATAGTGCAAGTCACTTACCAGAACTTATAGTTTTAGACTCTTTATTAGATAGAGATGAA TTAAAAAGAAAAATTCAAGAAAAAATAGGTCTTTAA
Upstream 100 bases:
>100_bases ATTTATTAAGAAAAATTGCAGAAGTTTGTATGAATAAAGAAAAATTAGATATAATAATAAATTCAAAATGTGAAAAAGAA ATCAAGGAGGTACTTTAATT
Downstream 100 bases:
>100_bases AATAATAAAGTGGTAATTTAATTACCACTTTCCAAAAATTAAACATTTAAATAAGCTTAGGAGGAATTAAAATGGGTGGT ATTTTAAAAGTTGCAGTAGA
Product: PTS sysytem, mannitol-specific enzyme II, B component
Products: NA
Alternate protein names: PTS Family Porter Component IIB; PTS Sysytem Mannitol-Specific II B Component; Sugar Phosphotransferase; 50S Ribosomal Protein L; Pts Eiib; PTS System Lactose/Cellobiocific IIB Component; Phosphotransferase System; PTS System EIIB Component; Ascorbate-Specific PTS System IIC/IIB; SgaB Protein; PEP-Dependent Phosphotransferase System Subunit IIB; PTS System Lactose/Cellobiocific IIB Subunit; Phosphotransferase Transport System IIB Component; PTS System Ascorbate-Specific IIB Component; PTS System Lactose/Cellobiose-Specific IIB Subunit; Phosphotransferase System Protein
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MKKIMAVCGSGLGSSFMVEMNITDVLRELGVDDQYEANHTSLADVTASDADIFVTGIDLADSASHLPELIVLDSLLDRDE LKRKIQEKIGL
Sequences:
>Translated_91_residues MKKIMAVCGSGLGSSFMVEMNITDVLRELGVDDQYEANHTSLADVTASDADIFVTGIDLADSASHLPELIVLDSLLDRDE LKRKIQEKIGL >Mature_91_residues MKKIMAVCGSGLGSSFMVEMNITDVLRELGVDDQYEANHTSLADVTASDADIFVTGIDLADSASHLPELIVLDSLLDRDE LKRKIQEKIGL
Specific function: Unknown
COG id: COG3414
COG function: function code G; Phosphotransferase system, galactitol-specific IIB component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9894; Mature: 9894
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIMAVCGSGLGSSFMVEMNITDVLRELGVDDQYEANHTSLADVTASDADIFVTGIDLA CCHHHHHHCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC DSASHLPELIVLDSLLDRDELKRKIQEKIGL CCHHHCHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MKKIMAVCGSGLGSSFMVEMNITDVLRELGVDDQYEANHTSLADVTASDADIFVTGIDLA CCHHHHHHCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC DSASHLPELIVLDSLLDRDELKRKIQEKIGL CCHHHCHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA