| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187932611
Identifier: 187932611
GI number: 187932611
Start: 3102920
End: 3103843
Strand: Reverse
Name: 187932611
Synonym: CLL_A3005
Alternate gene names: NA
Gene position: 3103843-3102920 (Counterclockwise)
Preceding gene: 187935336
Following gene: 187932914
Centisome position: 81.67
GC content: 28.79
Gene sequence:
>924_bases ATGAATAAGAATAATAAATTAGACAGTTTAATAAAATCAGCTATGGATGATAGTGCTAATAACATTAAAGCATCAAAAGA TATTTTTAATGATGCTTGGAATAAAAAAGAACAAGGAGTGACTAATATGAGTTATTTTAAAATAAAAAATATAAAGAGAG CGGCATTGATCACTGCATGTTGTGCAGCATTTTCTATTGTTGGAATCTTTACAATTTCACCAGAAGTTAGAGCAGCCGCA CAGGAAGTCTTTAGAACAATATTTATACCTGATGAATCTGGTAATATTGTAGAAAGATCAGAAGATGAAATCATTGAAAA TCATAACATTGGTGGCGTAATGATAACGGACTCAAATAAGACGGATATGGAAAAAAGGTTTGGGTTTACATTTAATTTTC CTGAAAAAATTGGTGAGTATCTCACTGAAAAACATGAGGGTCGCTCCATTCCACCTATAGCTGGTATAACTATTTACGAT ATAAAATATAAAGATACCCAAGATTTGAATAATAGATTTATGAAAGCAATAGATGATGACAAAACTTTTGAAGAACTTAA AGATTACAATATGGAAAGATACGTTTGTTCATCATCATATGTAGATAATCAAGGACACAAATTTTGGATATATCTATCAA AATATAGTTCGAATTCAAAAATGAATCTTGTAAAAGAAGTAAGTATTGATAATATAAAATGTAGAATTCTAGAAAGAACA GATGCTGAATATGATATAAAAATTAGTGATGATTCTTGGAGGGATGATATGACAAAGAAACCAACTAGTGTTGATAAAAA TTATTATATAGAATGGAATTATGATGGAGTAAGATATTGCCTATATATTGGAAATGATTCTTCTCATGCTGATGCAGCAA TACAATTTGCAGAAGATTATATAAAAATTTTGAAGCAATCATAG
Upstream 100 bases:
>100_bases GCAATTGGGTGATTGTTTTGAAAATCAAAATCATCTAGTAGAAGTTAAATGCAAACAAGTATAGTGTAAGCTAACTATAT AGATAAAGGAGTGTAGTAGA
Downstream 100 bases:
>100_bases AATAAAATATAAATATAAAAAAGTAGAATATGATTAATAAAATGAGCATCAAAAAGATGCTCATTTTTATTTATATGTAT TATTTTTGTTGATTTTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MNKNNKLDSLIKSAMDDSANNIKASKDIFNDAWNKKEQGVTNMSYFKIKNIKRAALITACCAAFSIVGIFTISPEVRAAA QEVFRTIFIPDESGNIVERSEDEIIENHNIGGVMITDSNKTDMEKRFGFTFNFPEKIGEYLTEKHEGRSIPPIAGITIYD IKYKDTQDLNNRFMKAIDDDKTFEELKDYNMERYVCSSSYVDNQGHKFWIYLSKYSSNSKMNLVKEVSIDNIKCRILERT DAEYDIKISDDSWRDDMTKKPTSVDKNYYIEWNYDGVRYCLYIGNDSSHADAAIQFAEDYIKILKQS
Sequences:
>Translated_307_residues MNKNNKLDSLIKSAMDDSANNIKASKDIFNDAWNKKEQGVTNMSYFKIKNIKRAALITACCAAFSIVGIFTISPEVRAAA QEVFRTIFIPDESGNIVERSEDEIIENHNIGGVMITDSNKTDMEKRFGFTFNFPEKIGEYLTEKHEGRSIPPIAGITIYD IKYKDTQDLNNRFMKAIDDDKTFEELKDYNMERYVCSSSYVDNQGHKFWIYLSKYSSNSKMNLVKEVSIDNIKCRILERT DAEYDIKISDDSWRDDMTKKPTSVDKNYYIEWNYDGVRYCLYIGNDSSHADAAIQFAEDYIKILKQS >Mature_307_residues MNKNNKLDSLIKSAMDDSANNIKASKDIFNDAWNKKEQGVTNMSYFKIKNIKRAALITACCAAFSIVGIFTISPEVRAAA QEVFRTIFIPDESGNIVERSEDEIIENHNIGGVMITDSNKTDMEKRFGFTFNFPEKIGEYLTEKHEGRSIPPIAGITIYD IKYKDTQDLNNRFMKAIDDDKTFEELKDYNMERYVCSSSYVDNQGHKFWIYLSKYSSNSKMNLVKEVSIDNIKCRILERT DAEYDIKISDDSWRDDMTKKPTSVDKNYYIEWNYDGVRYCLYIGNDSSHADAAIQFAEDYIKILKQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35447; Mature: 35447
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNNKLDSLIKSAMDDSANNIKASKDIFNDAWNKKEQGVTNMSYFKIKNIKRAALITAC CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCCCCEEEEECCCHHHHHHHHH CAAFSIVGIFTISPEVRAAAQEVFRTIFIPDESGNIVERSEDEIIENHNIGGVMITDSNK HHHHHHHEEEEECHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHCCCCCEEEEECCCC TDMEKRFGFTFNFPEKIGEYLTEKHEGRSIPPIAGITIYDIKYKDTQDLNNRFMKAIDDD CCHHHHCCCEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCC KTFEELKDYNMERYVCSSSYVDNQGHKFWIYLSKYSSNSKMNLVKEVSIDNIKCRILERT HHHHHHHHCCCHHEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEEEECC DAEYDIKISDDSWRDDMTKKPTSVDKNYYIEWNYDGVRYCLYIGNDSSHADAAIQFAEDY CCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHH IKILKQS HHHHHCC >Mature Secondary Structure MNKNNKLDSLIKSAMDDSANNIKASKDIFNDAWNKKEQGVTNMSYFKIKNIKRAALITAC CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCCCCEEEEECCCHHHHHHHHH CAAFSIVGIFTISPEVRAAAQEVFRTIFIPDESGNIVERSEDEIIENHNIGGVMITDSNK HHHHHHHEEEEECHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHCCCCCEEEEECCCC TDMEKRFGFTFNFPEKIGEYLTEKHEGRSIPPIAGITIYDIKYKDTQDLNNRFMKAIDDD CCHHHHCCCEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCC KTFEELKDYNMERYVCSSSYVDNQGHKFWIYLSKYSSNSKMNLVKEVSIDNIKCRILERT HHHHHHHHCCCHHEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEEEECC DAEYDIKISDDSWRDDMTKKPTSVDKNYYIEWNYDGVRYCLYIGNDSSHADAAIQFAEDY CCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHH IKILKQS HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA