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The map label for this gene is ccsB [H]

Identifier: 187930331

GI number: 187930331

Start: 3413197

End: 3415401

Strand: Reverse

Name: ccsB [H]

Synonym: Rpic_3264

Alternate gene names: 187930331

Gene position: 3415401-3413197 (Counterclockwise)

Preceding gene: 187930332

Following gene: 187930330

Centisome position: 86.63

GC content: 64.26

Gene sequence:

>2205_bases
ATGTCTTCGGTCTCCACTTCCGGCGTCCAGATCCGCTCCCGTCGTCGCGCGTTGCGCGAAACGGTCGAGTTGCTGTCGTC
GATGCGCTTTGCGATCAGCCTGCTGACGGTGATCGCCATTGCCAGCGTGATCGGCACGGTGCTCAAGCAGAACGATCCGT
ATCCGAACTACGTCAACCAATTCGGGCCGTTCTGGGCCGACGTATTCCGATCGCTGACGCTGCCGACCGTCTATAGCGCG
TGGTGGTTTCTGCTGATCCTGGCGTTCCTGGTGGTGTCGACCTCGCTGTGCATCGTGCGCAATGCGCCCAAGATGCTGGC
CGACATGCGCGCCTGGCGCGAGAACGTGCGCGAAGGCAGTCTGCGCGCGTTCCATCACCGGGACGAATTTGATTCCCGCG
CCGATACCGCCACCGTGACGGCACGCTTGGCCGCGCTTGCGCAGAACCGAGGTTTCCGCATCAAGGCGTTCGCGCGCGAG
GGTGGAGCGACGCTCATCGCGGCAAAGGCGGGAGCGGGCAACAAGATCGGCTACATCCTGGCGCACACGGCCATCGTCGT
GATCTGCATCGGCGGCTTGCTGGATGGCGACATGATGATCCGCGCGCAGATGTGGTTTGGTGGCAAGTCGCCCATCAAGG
GCAACGCGGTCATCAGCGACATCGGCCCGGAGCATCGGCTGTCGACATCGAACCCGGGGTTCCGCGGCAACGCCTTCGTG
CCGGAAGGTTCGACGGTCAGCACGGCGATCCTGAACATTGCCGATGGCGCGCTGATCCAGGACCTGCCGTTCATGATCAC
GCTCAAGAAGTTCACCGTCGAGCATTACTCGACCGGCATGCCCAAGCTGTTCGCCAGCGACATCGTCGTGACTGACCGCC
GCACCGGCAAGCAGACCGCTGCGCGCGTGGAGGTGAACAAGCCGTTCGTGTATGACGGCGTGGCGATCTACCAGTCGAGC
TTTGAAGATGGCGGCTCGAAGCTCAAGCTGACCGGCTACCCGATGCACGGTGACAACGCCAAGACGTTCGACATGTCGGG
CGTCGTGGGCGAAAGCTCGAAGCTCACCGGCAAGAGCGGCGACTACACGGTCGAGTTCTCCGACTTCCGCCTGATGAATG
TCGAAACGGTGACGGACGCCTCGGGCAAGCAGGACGCACGCGGTGTCGGCAAGAGGGGCGGTGCGGAAAATGGTCTGCGC
GCGGAGCTTGGCAACGTCACCAAGATGACGCGCGACCGCGATCTGCGCAACGTCGGCCCCTCCGTGCAGTACAAGCTGCG
CGACGCCAACGGCCAGGCACACGAGTTCAGCAACTACATGCTGCCCGTCACGCTGGACGGGCAATCGGTGTTCCTGGCCG
GCATGCGCTCGCAGCCGGACGAGCCGTTCCGCTATCTGCGCATTCCCGCCGATGCGCAAGGCACCGTCGCCGACTGGATG
CGCCTGCGCGCCGCGCTGCAGAATCCAGCGATGCGCGGCGAGGCAGCGCGCCGGTTTGCGCTGCTCTCCATGCCCGGCGA
GCAGCGCGCGGAACTGCGCAACCAGTTGATGGAAAGCGCTCGTCGCGCGCTCGACCTCTTTGCCGGCGCTGCCGATGTCA
AGGACGGTACCGCCGGTGCACAGGGCGGCTTTGCCGCAGTCGCCACGTTCTTGCAGAAATCGGTGCCTGAGGGTGAGCGT
GAGAAGGCGGCCGATGTGCTGATGAAAATCATCAACAGCTCCATGTGGGAACTGTGGCAACTGGCCCGCGCACAGGATGG
CCTGCCTGCACCCACGGTGGATGCGGCCAGCAGCCAGTGGTTGCAGAGCGCCATCAACGCGCTGTCGGACAACGTCTTCT
ACGGCGCACCCGTATATCTGCAGCTGACCGACTTCCAGCAGGTGCAGGCCAGCGTGTTCCAGCTCACACGTGCGCCGGGC
AAAAACATCGTGTATCTTGGGTCGCTGCTGCTGGTGCTGGGCGTGTTTTCGATGTTCTACGTGCGAGAGCGCCGCTGGTG
GCTGTGGATCCGACCGCAATCCGGTCCGGCCAACGAAAGCGCCTCCGGCGCACATGTGCTGACCGCCATGTCGACCATGC
GCCGCACGCTTGACTTCGACCGCGAGTTCGAGCGCCTCAAGCACGATATCCGCGCCGCGGCAGGTGCCCAAGCCGCCCCC
GATGCCGCCAGTGCAGCGAGCGTCGACCCCAAACCAACGAAGTGA

Upstream 100 bases:

>100_bases
GGCTGTCATGTGACAGTCGCACAATCAACAAGAAGAACAGGGTGGCAATGCGCCTGGCATCGCCACCCTGTTTTCGTTTT
TGAACAGGTTTTTTCCCCGC

Downstream 100 bases:

>100_bases
GCAGGTGATGGAAGCGACCAATCCCCAAACGACCGTGGCGAGCGCTGATCTGGGTGCGCTGAAGCGTCCGTCGTATTTCC
GCCGCCTGGGCTGGTTTGAC

Product: ResB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 734; Mature: 733

Protein sequence:

>734_residues
MSSVSTSGVQIRSRRRALRETVELLSSMRFAISLLTVIAIASVIGTVLKQNDPYPNYVNQFGPFWADVFRSLTLPTVYSA
WWFLLILAFLVVSTSLCIVRNAPKMLADMRAWRENVREGSLRAFHHRDEFDSRADTATVTARLAALAQNRGFRIKAFARE
GGATLIAAKAGAGNKIGYILAHTAIVVICIGGLLDGDMMIRAQMWFGGKSPIKGNAVISDIGPEHRLSTSNPGFRGNAFV
PEGSTVSTAILNIADGALIQDLPFMITLKKFTVEHYSTGMPKLFASDIVVTDRRTGKQTAARVEVNKPFVYDGVAIYQSS
FEDGGSKLKLTGYPMHGDNAKTFDMSGVVGESSKLTGKSGDYTVEFSDFRLMNVETVTDASGKQDARGVGKRGGAENGLR
AELGNVTKMTRDRDLRNVGPSVQYKLRDANGQAHEFSNYMLPVTLDGQSVFLAGMRSQPDEPFRYLRIPADAQGTVADWM
RLRAALQNPAMRGEAARRFALLSMPGEQRAELRNQLMESARRALDLFAGAADVKDGTAGAQGGFAAVATFLQKSVPEGER
EKAADVLMKIINSSMWELWQLARAQDGLPAPTVDAASSQWLQSAINALSDNVFYGAPVYLQLTDFQQVQASVFQLTRAPG
KNIVYLGSLLLVLGVFSMFYVRERRWWLWIRPQSGPANESASGAHVLTAMSTMRRTLDFDREFERLKHDIRAAAGAQAAP
DAASAASVDPKPTK

Sequences:

>Translated_734_residues
MSSVSTSGVQIRSRRRALRETVELLSSMRFAISLLTVIAIASVIGTVLKQNDPYPNYVNQFGPFWADVFRSLTLPTVYSA
WWFLLILAFLVVSTSLCIVRNAPKMLADMRAWRENVREGSLRAFHHRDEFDSRADTATVTARLAALAQNRGFRIKAFARE
GGATLIAAKAGAGNKIGYILAHTAIVVICIGGLLDGDMMIRAQMWFGGKSPIKGNAVISDIGPEHRLSTSNPGFRGNAFV
PEGSTVSTAILNIADGALIQDLPFMITLKKFTVEHYSTGMPKLFASDIVVTDRRTGKQTAARVEVNKPFVYDGVAIYQSS
FEDGGSKLKLTGYPMHGDNAKTFDMSGVVGESSKLTGKSGDYTVEFSDFRLMNVETVTDASGKQDARGVGKRGGAENGLR
AELGNVTKMTRDRDLRNVGPSVQYKLRDANGQAHEFSNYMLPVTLDGQSVFLAGMRSQPDEPFRYLRIPADAQGTVADWM
RLRAALQNPAMRGEAARRFALLSMPGEQRAELRNQLMESARRALDLFAGAADVKDGTAGAQGGFAAVATFLQKSVPEGER
EKAADVLMKIINSSMWELWQLARAQDGLPAPTVDAASSQWLQSAINALSDNVFYGAPVYLQLTDFQQVQASVFQLTRAPG
KNIVYLGSLLLVLGVFSMFYVRERRWWLWIRPQSGPANESASGAHVLTAMSTMRRTLDFDREFERLKHDIRAAAGAQAAP
DAASAASVDPKPTK
>Mature_733_residues
SSVSTSGVQIRSRRRALRETVELLSSMRFAISLLTVIAIASVIGTVLKQNDPYPNYVNQFGPFWADVFRSLTLPTVYSAW
WFLLILAFLVVSTSLCIVRNAPKMLADMRAWRENVREGSLRAFHHRDEFDSRADTATVTARLAALAQNRGFRIKAFAREG
GATLIAAKAGAGNKIGYILAHTAIVVICIGGLLDGDMMIRAQMWFGGKSPIKGNAVISDIGPEHRLSTSNPGFRGNAFVP
EGSTVSTAILNIADGALIQDLPFMITLKKFTVEHYSTGMPKLFASDIVVTDRRTGKQTAARVEVNKPFVYDGVAIYQSSF
EDGGSKLKLTGYPMHGDNAKTFDMSGVVGESSKLTGKSGDYTVEFSDFRLMNVETVTDASGKQDARGVGKRGGAENGLRA
ELGNVTKMTRDRDLRNVGPSVQYKLRDANGQAHEFSNYMLPVTLDGQSVFLAGMRSQPDEPFRYLRIPADAQGTVADWMR
LRAALQNPAMRGEAARRFALLSMPGEQRAELRNQLMESARRALDLFAGAADVKDGTAGAQGGFAAVATFLQKSVPEGERE
KAADVLMKIINSSMWELWQLARAQDGLPAPTVDAASSQWLQSAINALSDNVFYGAPVYLQLTDFQQVQASVFQLTRAPGK
NIVYLGSLLLVLGVFSMFYVRERRWWLWIRPQSGPANESASGAHVLTAMSTMRRTLDFDREFERLKHDIRAAAGAQAAPD
AASAASVDPKPTK

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 80182; Mature: 80050

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVSTSGVQIRSRRRALRETVELLSSMRFAISLLTVIAIASVIGTVLKQNDPYPNYVNQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
FGPFWADVFRSLTLPTVYSAWWFLLILAFLVVSTSLCIVRNAPKMLADMRAWRENVREGS
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHCCC
LRAFHHRDEFDSRADTATVTARLAALAQNRGFRIKAFAREGGATLIAAKAGAGNKIGYIL
HHHHHCHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCHHHHH
AHTAIVVICIGGLLDGDMMIRAQMWFGGKSPIKGNAVISDIGPEHRLSTSNPGFRGNAFV
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEC
PEGSTVSTAILNIADGALIQDLPFMITLKKFTVEHYSTGMPKLFASDIVVTDRRTGKQTA
CCCCCHHHHHHHHCCCHHHHCCCCEEEHHHHHHHHHCCCCCHHHHCCEEEECCCCCCCCC
ARVEVNKPFVYDGVAIYQSSFEDGGSKLKLTGYPMHGDNAKTFDMSGVVGESSKLTGKSG
EEEECCCCEEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCC
DYTVEFSDFRLMNVETVTDASGKQDARGVGKRGGAENGLRAELGNVTKMTRDRDLRNVGP
CEEEEECCEEEEEEEEECCCCCCCHHHCCCCCCCCCCCCHHHHCCHHHHHHCCHHHHCCC
SVQYKLRDANGQAHEFSNYMLPVTLDGQSVFLAGMRSQPDEPFRYLRIPADAQGTVADWM
CEEEEEECCCCCCHHHCCEEEEEEECCCEEEEEECCCCCCCCCEEEECCCCCCCCHHHHH
RLRAALQNPAMRGEAARRFALLSMPGEQRAELRNQLMESARRALDLFAGAADVKDGTAGA
HHHHHHHCCCCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QGGFAAVATFLQKSVPEGEREKAADVLMKIINSSMWELWQLARAQDGLPAPTVDAASSQW
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LQSAINALSDNVFYGAPVYLQLTDFQQVQASVFQLTRAPGKNIVYLGSLLLVLGVFSMFY
HHHHHHHHCCCCEECCEEEEEECCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH
VRERRWWLWIRPQSGPANESASGAHVLTAMSTMRRTLDFDREFERLKHDIRAAAGAQAAP
HHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCC
DAASAASVDPKPTK
CCCCCCCCCCCCCC
>Mature Secondary Structure 
SSVSTSGVQIRSRRRALRETVELLSSMRFAISLLTVIAIASVIGTVLKQNDPYPNYVNQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
FGPFWADVFRSLTLPTVYSAWWFLLILAFLVVSTSLCIVRNAPKMLADMRAWRENVREGS
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHCCC
LRAFHHRDEFDSRADTATVTARLAALAQNRGFRIKAFAREGGATLIAAKAGAGNKIGYIL
HHHHHCHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCHHHHH
AHTAIVVICIGGLLDGDMMIRAQMWFGGKSPIKGNAVISDIGPEHRLSTSNPGFRGNAFV
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEC
PEGSTVSTAILNIADGALIQDLPFMITLKKFTVEHYSTGMPKLFASDIVVTDRRTGKQTA
CCCCCHHHHHHHHCCCHHHHCCCCEEEHHHHHHHHHCCCCCHHHHCCEEEECCCCCCCCC
ARVEVNKPFVYDGVAIYQSSFEDGGSKLKLTGYPMHGDNAKTFDMSGVVGESSKLTGKSG
EEEECCCCEEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCC
DYTVEFSDFRLMNVETVTDASGKQDARGVGKRGGAENGLRAELGNVTKMTRDRDLRNVGP
CEEEEECCEEEEEEEEECCCCCCCHHHCCCCCCCCCCCCHHHHCCHHHHHHCCHHHHCCC
SVQYKLRDANGQAHEFSNYMLPVTLDGQSVFLAGMRSQPDEPFRYLRIPADAQGTVADWM
CEEEEEECCCCCCHHHCCEEEEEEECCCEEEEEECCCCCCCCCEEEECCCCCCCCHHHHH
RLRAALQNPAMRGEAARRFALLSMPGEQRAELRNQLMESARRALDLFAGAADVKDGTAGA
HHHHHHHCCCCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QGGFAAVATFLQKSVPEGEREKAADVLMKIINSSMWELWQLARAQDGLPAPTVDAASSQW
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LQSAINALSDNVFYGAPVYLQLTDFQQVQASVFQLTRAPGKNIVYLGSLLLVLGVFSMFY
HHHHHHHHCCCCEECCEEEEEECCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH
VRERRWWLWIRPQSGPANESASGAHVLTAMSTMRRTLDFDREFERLKHDIRAAAGAQAAP
HHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCC
DAASAASVDPKPTK
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]