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The map label for this gene is 187930067

Identifier: 187930067

GI number: 187930067

Start: 3126799

End: 3127863

Strand: Reverse

Name: 187930067

Synonym: Rpic_2999

Alternate gene names: NA

Gene position: 3127863-3126799 (Counterclockwise)

Preceding gene: 187930072

Following gene: 187930066

Centisome position: 79.34

GC content: 64.98

Gene sequence:

>1065_bases
ATGAATCGAACCACCGCTGTTCGCGGGATGCTGGCGTGCGGCCTTGCGCTCGCTGGCTGGACCGCTCCCGCCCTCGCACA
AACCAGCGTCACGCTGTACGGCCGCGTCGCCAGCGGCATCGACTACCAGAACAACGTCGCCCCCACCGCGACCTCGCCGG
GCGGCAGCCTCTGGCGCGCCGCCGACAACCAGTGGGGGACCAGCATGTTCGGATTCATGGGCAAGGAGGATCTGGGCGGT
GGTCTGCAGGCGGTCTTCCGGCTCGAATCCGGCTTCGGCGCAGCCCAGGGCAAAACCAATGGCGATGCGCTGTTCAACCG
CCGTTCGTACGTCGGCCTGTCCAGCCCCACCTGGGGCACGTTGACTGCGGGCAAGAACCTCTTCATCAGCAACGACGTCT
GGTTCCTCGACCCGACCGGCCAGCAGTTCATCGGCTCGGCCACGCTCGTGCGCGGGCGCAACTGGCCGGGTGCCAACAAC
ATCGTCGAATACCAGAGCCCGACCTGGGGCGGCTTCCAGATCGGTCTGCAGACCGGCCTGGGCGAGCAGCCGGGCTCCTT
CACGAACAGCCGGCGCGATGGCGTGTCTGCTGTCTACTCCGCCGGTCCGCTGGAAGTGCGCGCGATTTACGACGTGATCC
GCGACGGCAACGGCAAGTTCAGCGACATCTTCAACTTCTCGAAGGAAGCGACGGTCGGCGGTACGTACACGATCGGCAAG
GCGAAGCTGTTTGCCGTGTATGAAAACCTGTCGGCCCCGGATGCCGCAGCCGGCGCCCCGACCAAGGCGAACCATTATTG
GCTGGGCATCAACTACGAACTCACGCCGGCGCTGACGCTGATCGGCGCGGCCTACCGCGTCAACGTGAACCACGGTGGCG
GCAACGCCAACCTGTTCATGGCCGGCGCAAACTACAACCTGTCCAAGCGCACGATGCTGTACGCGAGCGTGGGCACCGTG
CAGAACAGCGCCACCGCCAACTTCTCGGTAGAAGCGACCAACAACAACCCGGCGCCGGGCAAGAACCAGCTGGGTGCCTA
TACGGGTATCGTTCACTCGTTCTAA

Upstream 100 bases:

>100_bases
ATGCGCCTGGGGACGGTGACGATGCCTGGTGCGTGCCTCCAGCGATCTCAAACCACGCGACGCACCGGACCCCGCCTACA
AAAACATTTCAGGAGACGTC

Downstream 100 bases:

>100_bases
AAAACCGCTCATGATCGTGGTGCGCACCCCCAACTTGACCCCGCGATGCTGCTGTTTCCAGATGACGTCCTCATGAGCGG
CGGCAATTCTCAAGTCAACC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNRTTAVRGMLACGLALAGWTAPALAQTSVTLYGRVASGIDYQNNVAPTATSPGGSLWRAADNQWGTSMFGFMGKEDLGG
GLQAVFRLESGFGAAQGKTNGDALFNRRSYVGLSSPTWGTLTAGKNLFISNDVWFLDPTGQQFIGSATLVRGRNWPGANN
IVEYQSPTWGGFQIGLQTGLGEQPGSFTNSRRDGVSAVYSAGPLEVRAIYDVIRDGNGKFSDIFNFSKEATVGGTYTIGK
AKLFAVYENLSAPDAAAGAPTKANHYWLGINYELTPALTLIGAAYRVNVNHGGGNANLFMAGANYNLSKRTMLYASVGTV
QNSATANFSVEATNNNPAPGKNQLGAYTGIVHSF

Sequences:

>Translated_354_residues
MNRTTAVRGMLACGLALAGWTAPALAQTSVTLYGRVASGIDYQNNVAPTATSPGGSLWRAADNQWGTSMFGFMGKEDLGG
GLQAVFRLESGFGAAQGKTNGDALFNRRSYVGLSSPTWGTLTAGKNLFISNDVWFLDPTGQQFIGSATLVRGRNWPGANN
IVEYQSPTWGGFQIGLQTGLGEQPGSFTNSRRDGVSAVYSAGPLEVRAIYDVIRDGNGKFSDIFNFSKEATVGGTYTIGK
AKLFAVYENLSAPDAAAGAPTKANHYWLGINYELTPALTLIGAAYRVNVNHGGGNANLFMAGANYNLSKRTMLYASVGTV
QNSATANFSVEATNNNPAPGKNQLGAYTGIVHSF
>Mature_354_residues
MNRTTAVRGMLACGLALAGWTAPALAQTSVTLYGRVASGIDYQNNVAPTATSPGGSLWRAADNQWGTSMFGFMGKEDLGG
GLQAVFRLESGFGAAQGKTNGDALFNRRSYVGLSSPTWGTLTAGKNLFISNDVWFLDPTGQQFIGSATLVRGRNWPGANN
IVEYQSPTWGGFQIGLQTGLGEQPGSFTNSRRDGVSAVYSAGPLEVRAIYDVIRDGNGKFSDIFNFSKEATVGGTYTIGK
AKLFAVYENLSAPDAAAGAPTKANHYWLGINYELTPALTLIGAAYRVNVNHGGGNANLFMAGANYNLSKRTMLYASVGTV
QNSATANFSVEATNNNPAPGKNQLGAYTGIVHSF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37307; Mature: 37307

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTTAVRGMLACGLALAGWTAPALAQTSVTLYGRVASGIDYQNNVAPTATSPGGSLWRA
CCCHHHHHHHHHHHHHHHCCCCCHHHHCEEEEEEEHHCCCCCCCCCCCCCCCCCCCEEEC
ADNQWGTSMFGFMGKEDLGGGLQAVFRLESGFGAAQGKTNGDALFNRRSYVGLSSPTWGT
CCCCCCCHHHHCCCCHHCCCHHEEEEEECCCCCCCCCCCCCHHHCCCCCEECCCCCCCEE
LTAGKNLFISNDVWFLDPTGQQFIGSATLVRGRNWPGANNIVEYQSPTWGGFQIGLQTGL
EECCCEEEEECCEEEECCCCHHHHCCEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCC
GEQPGSFTNSRRDGVSAVYSAGPLEVRAIYDVIRDGNGKFSDIFNFSKEATVGGTYTIGK
CCCCCCCCCCCCCCCHHHHCCCCEEHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEECC
AKLFAVYENLSAPDAAAGAPTKANHYWLGINYELTPALTLIGAAYRVNVNHGGGNANLFM
EEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCHHHEEEEEEEEEEEECCCCCEEEEE
AGANYNLSKRTMLYASVGTVQNSATANFSVEATNNNPAPGKNQLGAYTGIVHSF
EECCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MNRTTAVRGMLACGLALAGWTAPALAQTSVTLYGRVASGIDYQNNVAPTATSPGGSLWRA
CCCHHHHHHHHHHHHHHHCCCCCHHHHCEEEEEEEHHCCCCCCCCCCCCCCCCCCCEEEC
ADNQWGTSMFGFMGKEDLGGGLQAVFRLESGFGAAQGKTNGDALFNRRSYVGLSSPTWGT
CCCCCCCHHHHCCCCHHCCCHHEEEEEECCCCCCCCCCCCCHHHCCCCCEECCCCCCCEE
LTAGKNLFISNDVWFLDPTGQQFIGSATLVRGRNWPGANNIVEYQSPTWGGFQIGLQTGL
EECCCEEEEECCEEEECCCCHHHHCCEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCC
GEQPGSFTNSRRDGVSAVYSAGPLEVRAIYDVIRDGNGKFSDIFNFSKEATVGGTYTIGK
CCCCCCCCCCCCCCCHHHHCCCCEEHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEECC
AKLFAVYENLSAPDAAAGAPTKANHYWLGINYELTPALTLIGAAYRVNVNHGGGNANLFM
EEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCHHHEEEEEEEEEEEECCCCCEEEEE
AGANYNLSKRTMLYASVGTVQNSATANFSVEATNNNPAPGKNQLGAYTGIVHSF
EECCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]