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The map label for this gene is dgoK [C]

Identifier: 187930066

GI number: 187930066

Start: 3125611

End: 3126624

Strand: Reverse

Name: dgoK [C]

Synonym: Rpic_2998

Alternate gene names: 187930066

Gene position: 3126624-3125611 (Counterclockwise)

Preceding gene: 187930067

Following gene: 187930065

Centisome position: 79.3

GC content: 65.88

Gene sequence:

>1014_bases
ATGAACATCCTCACCATCGATACCGGTACCACCAACACACGCGTCACGGTCTGGCGCGATGACGTTGCGCTTTGCCAGGC
TGCGCGCCAGGTTGGTGTGCGCGATACCGCCATCACCGGCAACCGGACGACGCTGCAGCGCGGCGTGCAAGACACGATTG
ACGCTGCGCTGCAGAAGGCCGGTTTCGGCATGGGCCAGGTCGACTTGGTGCTGGCCTCCGGCATGATCACCTCCAACGTT
GGCCTGCACGAAGTCCCGCACCTGATCGCGCCGGCCGGCCTGCGCGACCTGGCGGCCGGGATGGTGCAGGCGAGCATTCC
CGAGGTGTGCCCTCAGCCAATCTGGTTCGTGCCGGGCGTACGCAATCCGGTGGACAACCTCGGCCTGCACAACATCGAGT
CGATGGACATGATGCGCGGCGAAGAGGTCGAGACCATGGGTTTGGTCTCGCGCCTCGGCATCACGGAGCCGGCGGTGATC
GTGCTGCCCGGGTCGCACTCGAAGTTCGTGCATCTGGACGCCGACCAGCGCATCACCGGCTGTGTGACCACGCTGGCCGG
CGAGCTGCTCCACGTGATTACCCACAACACCATCCTGGCCGACGCGCTCGACTCGGACTTTGCCACCGAGGTCGATCCGG
AAATGTTGCTGTCCGGCGCGCGCAGCGCCAGCAGCATCGGACTGGGGCGCGCCTGCTTCATGGTGCGCACGCTGGGCCAG
TTCACGATCTACGAGCGCAATGCGCGGGCCAACTTCCTGCTGGGCGCGGTGCTGGGCGCGGATTTGCTCACGCTCAAGAA
CAGCAGCGCGATCCGCATGAACCCGGGCACGCAGTTCGTCATCACGGGCAAGCCGCTGCTGCGCGAAGCGCTGGCCGTGC
TGGTGTCGGACGACGATTTCTTCTCGGGCAAGGTCACCGTCACCAGCAGTGAACAGCAGGAGCACCTGGCCGGCAGCGGC
GCGATCGCCATCGCACGCGAGCGCGGCCTGGTCAAAACCTTGAAGGTGGCGTGA

Upstream 100 bases:

>100_bases
GAGCGGCGGCAATTCTCAAGTCAACCTGGGGCCGCCCGCTGCGGCTCATGGATGGTTTTAACCCGGGCCGCGTCCCAAGT
CACACCAAGCAATGCCACGC

Downstream 100 bases:

>100_bases
GCCCGGCGCACACGCCATCCCTCTTTCATCCAACGCAGAACAGATGCCGCAATGACGGTATCGCAAGGAGACAAACATGC
AACAACAACGACGCGGGACA

Product: putative 2-dehydro-3-deoxygalactonokinase protein

Products: ADP; 2-dehydro-3-deoxy-D-galactonate 6-phosphate

Alternate protein names: 2-Keto-3-Deoxy-Galactonokinase; 2-Keto-3-Deoxygalactonate Kinase; 2-Oxo-3-Deoxygalactonate Kinase; 2-Dehydro-3-Deoxygalactonokinase Protein; Galactonokinase; 2-Dehydro-3-Deoxygalactonokinase Superfamily

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNILTIDTGTTNTRVTVWRDDVALCQAARQVGVRDTAITGNRTTLQRGVQDTIDAALQKAGFGMGQVDLVLASGMITSNV
GLHEVPHLIAPAGLRDLAAGMVQASIPEVCPQPIWFVPGVRNPVDNLGLHNIESMDMMRGEEVETMGLVSRLGITEPAVI
VLPGSHSKFVHLDADQRITGCVTTLAGELLHVITHNTILADALDSDFATEVDPEMLLSGARSASSIGLGRACFMVRTLGQ
FTIYERNARANFLLGAVLGADLLTLKNSSAIRMNPGTQFVITGKPLLREALAVLVSDDDFFSGKVTVTSSEQQEHLAGSG
AIAIARERGLVKTLKVA

Sequences:

>Translated_337_residues
MNILTIDTGTTNTRVTVWRDDVALCQAARQVGVRDTAITGNRTTLQRGVQDTIDAALQKAGFGMGQVDLVLASGMITSNV
GLHEVPHLIAPAGLRDLAAGMVQASIPEVCPQPIWFVPGVRNPVDNLGLHNIESMDMMRGEEVETMGLVSRLGITEPAVI
VLPGSHSKFVHLDADQRITGCVTTLAGELLHVITHNTILADALDSDFATEVDPEMLLSGARSASSIGLGRACFMVRTLGQ
FTIYERNARANFLLGAVLGADLLTLKNSSAIRMNPGTQFVITGKPLLREALAVLVSDDDFFSGKVTVTSSEQQEHLAGSG
AIAIARERGLVKTLKVA
>Mature_337_residues
MNILTIDTGTTNTRVTVWRDDVALCQAARQVGVRDTAITGNRTTLQRGVQDTIDAALQKAGFGMGQVDLVLASGMITSNV
GLHEVPHLIAPAGLRDLAAGMVQASIPEVCPQPIWFVPGVRNPVDNLGLHNIESMDMMRGEEVETMGLVSRLGITEPAVI
VLPGSHSKFVHLDADQRITGCVTTLAGELLHVITHNTILADALDSDFATEVDPEMLLSGARSASSIGLGRACFMVRTLGQ
FTIYERNARANFLLGAVLGADLLTLKNSSAIRMNPGTQFVITGKPLLREALAVLVSDDDFFSGKVTVTSSEQQEHLAGSG
AIAIARERGLVKTLKVA

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.58

Molecular weight: Translated: 35845; Mature: 35845

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILTIDTGTTNTRVTVWRDDVALCQAARQVGVRDTAITGNRTTLQRGVQDTIDAALQKA
CEEEEEECCCCCCEEEEEECHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
GFGMGQVDLVLASGMITSNVGLHEVPHLIAPAGLRDLAAGMVQASIPEVCPQPIWFVPGV
CCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCEEECCCC
RNPVDNLGLHNIESMDMMRGEEVETMGLVSRLGITEPAVIVLPGSHSKFVHLDADQRITG
CCCHHHCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCHHH
CVTTLAGELLHVITHNTILADALDSDFATEVDPEMLLSGARSASSIGLGRACFMVRTLGQ
HHHHHHHHHHHHHHCCHHEEHHHCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCC
FTIYERNARANFLLGAVLGADLLTLKNSSAIRMNPGTQFVITGKPLLREALAVLVSDDDF
EEEEECCCCCHHHHHHHHCCCEEEECCCCEEEECCCCEEEEECCHHHHHHHHEEECCCCC
FSGKVTVTSSEQQEHLAGSGAIAIARERGLVKTLKVA
CCCEEEEECCHHHHHHCCCCEEEEEECCCCEEEEECC
>Mature Secondary Structure
MNILTIDTGTTNTRVTVWRDDVALCQAARQVGVRDTAITGNRTTLQRGVQDTIDAALQKA
CEEEEEECCCCCCEEEEEECHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
GFGMGQVDLVLASGMITSNVGLHEVPHLIAPAGLRDLAAGMVQASIPEVCPQPIWFVPGV
CCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCEEECCCC
RNPVDNLGLHNIESMDMMRGEEVETMGLVSRLGITEPAVIVLPGSHSKFVHLDADQRITG
CCCHHHCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCHHH
CVTTLAGELLHVITHNTILADALDSDFATEVDPEMLLSGARSASSIGLGRACFMVRTLGQ
HHHHHHHHHHHHHHCCHHEEHHHCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCC
FTIYERNARANFLLGAVLGADLLTLKNSSAIRMNPGTQFVITGKPLLREALAVLVSDDDF
EEEEECCCCCHHHHHHHHCCCEEEECCCCEEEECCCCEEEEECCHHHHHHHHEEECCCCC
FSGKVTVTSSEQQEHLAGSGAIAIARERGLVKTLKVA
CCCEEEEECCHHHHHHCCCCEEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 2-dehydro-3-deoxy-D-galactonate

Specific reaction: ATP + 2-dehydro-3-deoxy-D-galactonate = ADP + 2-dehydro-3-deoxy-D-galactonate 6-phosphate

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA