| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is yjeE [C]
Identifier: 187929885
GI number: 187929885
Start: 2924877
End: 2925455
Strand: Reverse
Name: yjeE [C]
Synonym: Rpic_2816
Alternate gene names: 187929885
Gene position: 2925455-2924877 (Counterclockwise)
Preceding gene: 187929892
Following gene: 187929884
Centisome position: 74.2
GC content: 65.63
Gene sequence:
>579_bases ATGCCCACCGTGCTCCCTGCTGACGTGCCTTCTGGTCTGACCCCTCCGCTCGCCGAGCGCACGCTTTCGCTCGTCGATGA AGCGGCCACGTCGGCCTTTGGCACGGCGCTTGCGCAGGCTGTGCTGGCACTGGGTCCGCGGCCCGTGCAGGTGCAGCTCT CGGGCGATCTGGGCGCGGGCAAGACGACGCTCTCGCGTGCCATCCTGCGCGGCCTCGGACACACCGGGCGCGTGCGCAGC CCCACCTATACGCTGGTCGAGCCGTACGACGTTGCCGGAACTACGGGCACGCAAAAGGTCTATCACTTCGACCTGTACCG TTTTGCCGATCCCGAAGAATGGACCGATGCCGGCTTCCGCGACTGCTTTGCCGAACCCGCGCTGTGCCTGGTCGAATGGC CCGAGAAGGCGCAGGCGCTGCTCGGCACGCCCGATCTGCACATCGCCTTATCGGTCGACGTTGTGCACGAAACCTACGAT GACGGCGTTGAGCATGCACCGCGCGCAGCACGTCTGAGCGCACGCACGCAGACCGGCCTTCAACTTCTACAGTCGTTGCA ACACCTGTTCCCATGCTGA
Upstream 100 bases:
>100_bases CACGAGCGCGTGCATGCCGGCCGCATCGGCTGGCAGGCGTGCATCCAGGTTCGTTTCGGGTGATGACGTGGGGGTGGCGG ACATGCCCAAATTGTACGCA
Downstream 100 bases:
>100_bases TCAAGCATCTGCCGACCGACCATCCGGATGATCCCAACCTGCCGAGCCAGGCCCGCCGCCAATGGCTCACGCGCATGGCG AAGGCCGGCGCAGGCACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MPTVLPADVPSGLTPPLAERTLSLVDEAATSAFGTALAQAVLALGPRPVQVQLSGDLGAGKTTLSRAILRGLGHTGRVRS PTYTLVEPYDVAGTTGTQKVYHFDLYRFADPEEWTDAGFRDCFAEPALCLVEWPEKAQALLGTPDLHIALSVDVVHETYD DGVEHAPRAARLSARTQTGLQLLQSLQHLFPC
Sequences:
>Translated_192_residues MPTVLPADVPSGLTPPLAERTLSLVDEAATSAFGTALAQAVLALGPRPVQVQLSGDLGAGKTTLSRAILRGLGHTGRVRS PTYTLVEPYDVAGTTGTQKVYHFDLYRFADPEEWTDAGFRDCFAEPALCLVEWPEKAQALLGTPDLHIALSVDVVHETYD DGVEHAPRAARLSARTQTGLQLLQSLQHLFPC >Mature_191_residues PTVLPADVPSGLTPPLAERTLSLVDEAATSAFGTALAQAVLALGPRPVQVQLSGDLGAGKTTLSRAILRGLGHTGRVRSP TYTLVEPYDVAGTTGTQKVYHFDLYRFADPEEWTDAGFRDCFAEPALCLVEWPEKAQALLGTPDLHIALSVDVVHETYDD GVEHAPRAARLSARTQTGLQLLQSLQHLFPC
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=170, Percent_Identity=45.8823529411765, Blast_Score=127, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 20601; Mature: 20469
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTVLPADVPSGLTPPLAERTLSLVDEAATSAFGTALAQAVLALGPRPVQVQLSGDLGAG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC KTTLSRAILRGLGHTGRVRSPTYTLVEPYDVAGTTGTQKVYHFDLYRFADPEEWTDAGFR HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHCCCCCHHHHHCHHH DCFAEPALCLVEWPEKAQALLGTPDLHIALSVDVVHETYDDGVEHAPRAARLSARTQTGL HHHCCCCEEEEECCHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHH QLLQSLQHLFPC HHHHHHHHHCCC >Mature Secondary Structure PTVLPADVPSGLTPPLAERTLSLVDEAATSAFGTALAQAVLALGPRPVQVQLSGDLGAG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC KTTLSRAILRGLGHTGRVRSPTYTLVEPYDVAGTTGTQKVYHFDLYRFADPEEWTDAGFR HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHCCCCCHHHHHCHHH DCFAEPALCLVEWPEKAQALLGTPDLHIALSVDVVHETYDDGVEHAPRAARLSARTQTGL HHHCCCCEEEEECCHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHH QLLQSLQHLFPC HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]