| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929759
Identifier: 187929759
GI number: 187929759
Start: 2799741
End: 2800289
Strand: Reverse
Name: 187929759
Synonym: Rpic_2688
Alternate gene names: NA
Gene position: 2800289-2799741 (Counterclockwise)
Preceding gene: 187929760
Following gene: 187929758
Centisome position: 71.03
GC content: 66.67
Gene sequence:
>549_bases ATGAGCAAGATCATCAAGCTGCAAAACGGTGCCCCGCAAATCGTGGCTGACGAATGGACCGTGCTGCGCACCCCGGAAGG TGGTGAGCTGACGCAAGCCGATGTGGACGCCGCCGCGCACGCCATCGTGCCGCTGCCCTATTGGGAAGCCCACCGCGACG CACTGCTCGCCCGCGCCCGCGCCGGCACACTGGCCGTCTGGCTCGCTCCGGACGACGAGCCGTTCGCGCTGGAGGCAGAC CTGCCCAGCTTGTCGCTGGTGGCGGTGGATTTCCCGGTCTTCCGTGATGGCCGTGGCTACAGCACCGCGTTCCTGCTGCG CCAGCGCCTGGGCTTCACGCGTGAGTTGCGTGCCATCGGCGACGTGCTGCGCGATCAACTGGACTTCATGCGCCGTTGCG GTTTCGACGCTTACGCCGTGCGCGCAGACAAGAACATCGACGATGCACTGAACGGCTTCGGCGAGATCAGCGTGCGCTAC CAAGGCGCCGTCGACGAGCCGCGTCCGTTGTTCCGCCGCGAGCGTGCTACCGAGGCGAGCGCAGTATGA
Upstream 100 bases:
>100_bases AGACGAACGCTTCATCGACACCTATCACCGCATCGGCATGGCCCCGTTCAAGGAACGCGTCTACGCCCGTGCAGAAGCCT GAAAGCCGAGGGAAACGAAC
Downstream 100 bases:
>100_bases GCGAGTTCCAAGAGGCTGCCCTGTCCGAGGTGCCGGTGTCCGCTATCGGGCGCCCGGTGCTGTGGACGCGTCCGGTCTAC ACCGGCACGGCTGAAGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSKIIKLQNGAPQIVADEWTVLRTPEGGELTQADVDAAAHAIVPLPYWEAHRDALLARARAGTLAVWLAPDDEPFALEAD LPSLSLVAVDFPVFRDGRGYSTAFLLRQRLGFTRELRAIGDVLRDQLDFMRRCGFDAYAVRADKNIDDALNGFGEISVRY QGAVDEPRPLFRRERATEASAV
Sequences:
>Translated_182_residues MSKIIKLQNGAPQIVADEWTVLRTPEGGELTQADVDAAAHAIVPLPYWEAHRDALLARARAGTLAVWLAPDDEPFALEAD LPSLSLVAVDFPVFRDGRGYSTAFLLRQRLGFTRELRAIGDVLRDQLDFMRRCGFDAYAVRADKNIDDALNGFGEISVRY QGAVDEPRPLFRRERATEASAV >Mature_181_residues SKIIKLQNGAPQIVADEWTVLRTPEGGELTQADVDAAAHAIVPLPYWEAHRDALLARARAGTLAVWLAPDDEPFALEADL PSLSLVAVDFPVFRDGRGYSTAFLLRQRLGFTRELRAIGDVLRDQLDFMRRCGFDAYAVRADKNIDDALNGFGEISVRYQ GAVDEPRPLFRRERATEASAV
Specific function: Unknown
COG id: COG3749
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20183; Mature: 20052
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIKLQNGAPQIVADEWTVLRTPEGGELTQADVDAAAHAIVPLPYWEAHRDALLARAR CCCEEEECCCCCCEEECCEEEEECCCCCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHC AGTLAVWLAPDDEPFALEADLPSLSLVAVDFPVFRDGRGYSTAFLLRQRLGFTRELRAIG CCEEEEEECCCCCCEEEECCCCCEEEEEEECCEEECCCCCHHHHHHHHHHCHHHHHHHHH DVLRDQLDFMRRCGFDAYAVRADKNIDDALNGFGEISVRYQGAVDEPRPLFRRERATEAS HHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCC AV CC >Mature Secondary Structure SKIIKLQNGAPQIVADEWTVLRTPEGGELTQADVDAAAHAIVPLPYWEAHRDALLARAR CCEEEECCCCCCEEECCEEEEECCCCCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHC AGTLAVWLAPDDEPFALEADLPSLSLVAVDFPVFRDGRGYSTAFLLRQRLGFTRELRAIG CCEEEEEECCCCCCEEEECCCCCEEEEEEECCEEECCCCCHHHHHHHHHHCHHHHHHHHH DVLRDQLDFMRRCGFDAYAVRADKNIDDALNGFGEISVRYQGAVDEPRPLFRRERATEAS HHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCC AV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA