| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is gloB [H]
Identifier: 187929604
GI number: 187929604
Start: 2643760
End: 2644533
Strand: Reverse
Name: gloB [H]
Synonym: Rpic_2530
Alternate gene names: 187929604
Gene position: 2644533-2643760 (Counterclockwise)
Preceding gene: 187929605
Following gene: 187929598
Centisome position: 67.08
GC content: 61.5
Gene sequence:
>774_bases ATGTTGACACTTCGACCGTTGCCGGCGTTCGCTGACAACTACATTTGGGTATTGCATGATGAGCGACACGCTTGGGTCGT GGATCCTGGGGAGTCTGCACAAGTGCTCGACTATCTGCAGAAGCACGGTCTGGTTCTGCAGGGGATACTTCTGACGCACC ATCACTCCGACCATGTCGGCGGAGTGCAGGCGCTGCGCCAGCAAACCGGCGCTGCTGTCTACGGTCCGGCGGGCGAGCCG ATTCCCGAGCCTGCGCGCCGGCTGAGGCAGGGCGATCGGGTGGATGTCTTGGAGCAGCAGTTTGAGGTGATCGATGTGCC GGGACATACCGCCGGCCACATCGCTTATTTCAGTGCTGCCTGCCCCGATGGACCGCTCTTGTTTTGCGGGGACACGCTGT TTTCGGGAGGCTGCGGAAGGTTGTTCGAGGGCACACCGGAGCAGATGCTGGCATCTCTCGATACGCTCGCGGCCTTGCCC GCGCAGACGCAAGTGTGTCCCGCGCATGAATACACGCTAGCCAACCTGCGGTTCGCGCAGACGGTCGAACCATCTAACGA AGCTCTGGCCCGCCACGTGCCCTATTGCGAGATGTTGCGCGCGCAAGGATTGCCGACGCTACCGAGCCGCCTTGGGCTCG AGCGTCAGATCAACCCGTTCCTTCGCTCGCGCGAACCCAGCGTGCGGCAGTCGCTCAGTCGGTTGCCGTCAGCCAGTCTT GGCGATGTGCACGTCTTTGCCGCGCTTCGCGAATGGAAAAACAACTTTCAATGA
Upstream 100 bases:
>100_bases GTCGTCGGTCAACTGGCCGCGCTGGCGGCGAGCGATGAACTCAACGCCGCGCAAGCCGAGGCGCCGTCGGCGCTGGAATT TGTCTGAAGGCTGGCTCCCC
Downstream 100 bases:
>100_bases TCGCGCGCTGAGCGTGGCGCATCGGGTCGTTACGTGTCACAGGGTTCTGCTCGCCCCCTGCGCAGGCGGTTCTGTGGCGA TATGACGGCGGCGAGGAACG
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MLTLRPLPAFADNYIWVLHDERHAWVVDPGESAQVLDYLQKHGLVLQGILLTHHHSDHVGGVQALRQQTGAAVYGPAGEP IPEPARRLRQGDRVDVLEQQFEVIDVPGHTAGHIAYFSAACPDGPLLFCGDTLFSGGCGRLFEGTPEQMLASLDTLAALP AQTQVCPAHEYTLANLRFAQTVEPSNEALARHVPYCEMLRAQGLPTLPSRLGLERQINPFLRSREPSVRQSLSRLPSASL GDVHVFAALREWKNNFQ
Sequences:
>Translated_257_residues MLTLRPLPAFADNYIWVLHDERHAWVVDPGESAQVLDYLQKHGLVLQGILLTHHHSDHVGGVQALRQQTGAAVYGPAGEP IPEPARRLRQGDRVDVLEQQFEVIDVPGHTAGHIAYFSAACPDGPLLFCGDTLFSGGCGRLFEGTPEQMLASLDTLAALP AQTQVCPAHEYTLANLRFAQTVEPSNEALARHVPYCEMLRAQGLPTLPSRLGLERQINPFLRSREPSVRQSLSRLPSASL GDVHVFAALREWKNNFQ >Mature_257_residues MLTLRPLPAFADNYIWVLHDERHAWVVDPGESAQVLDYLQKHGLVLQGILLTHHHSDHVGGVQALRQQTGAAVYGPAGEP IPEPARRLRQGDRVDVLEQQFEVIDVPGHTAGHIAYFSAACPDGPLLFCGDTLFSGGCGRLFEGTPEQMLASLDTLAALP AQTQVCPAHEYTLANLRFAQTVEPSNEALARHVPYCEMLRAQGLPTLPSRLGLERQINPFLRSREPSVRQSLSRLPSASL GDVHVFAALREWKNNFQ
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538322, Length=263, Percent_Identity=36.8821292775665, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI94538320, Length=263, Percent_Identity=36.8821292775665, Blast_Score=165, Evalue=3e-41, Organism=Homo sapiens, GI14150041, Length=234, Percent_Identity=40.1709401709402, Blast_Score=159, Evalue=2e-39, Organism=Homo sapiens, GI21703352, Length=251, Percent_Identity=39.8406374501992, Blast_Score=154, Evalue=7e-38, Organism=Homo sapiens, GI116642887, Length=251, Percent_Identity=39.8406374501992, Blast_Score=154, Evalue=7e-38, Organism=Homo sapiens, GI46361987, Length=191, Percent_Identity=40.8376963350785, Blast_Score=133, Evalue=2e-31, Organism=Escherichia coli, GI1786406, Length=262, Percent_Identity=44.2748091603053, Blast_Score=189, Evalue=1e-49, Organism=Escherichia coli, GI1787158, Length=190, Percent_Identity=33.6842105263158, Blast_Score=82, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17536925, Length=264, Percent_Identity=36.7424242424242, Blast_Score=161, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6320478, Length=268, Percent_Identity=30.5970149253731, Blast_Score=111, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6324614, Length=269, Percent_Identity=28.6245353159851, Blast_Score=88, Evalue=1e-18, Organism=Drosophila melanogaster, GI21356335, Length=263, Percent_Identity=38.4030418250951, Blast_Score=169, Evalue=1e-42, Organism=Drosophila melanogaster, GI24667711, Length=263, Percent_Identity=38.4030418250951, Blast_Score=169, Evalue=1e-42, Organism=Drosophila melanogaster, GI24667703, Length=263, Percent_Identity=38.4030418250951, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI221330176, Length=173, Percent_Identity=30.0578034682081, Blast_Score=73, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28317; Mature: 28317
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00743 BETA_LACTAMASE_B_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLRPLPAFADNYIWVLHDERHAWVVDPGESAQVLDYLQKHGLVLQGILLTHHHSDHVG CCCCCCCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHCCCEEEEHHHHCCCCCCHH GVQALRQQTGAAVYGPAGEPIPEPARRLRQGDRVDVLEQQFEVIDVPGHTAGHIAYFSAA HHHHHHHHCCCEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHEEECCCCCCCCEEEEECC CPDGPLLFCGDTLFSGGCGRLFEGTPEQMLASLDTLAALPAQTQVCPAHEYTLANLRFAQ CCCCCEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEC TVEPSNEALARHVPYCEMLRAQGLPTLPSRLGLERQINPFLRSREPSVRQSLSRLPSASL CCCCCHHHHHHHCCHHHHHHHCCCCCCHHHHCCHHHCCHHHHCCCHHHHHHHHHCCCCCC GDVHVFAALREWKNNFQ CHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTLRPLPAFADNYIWVLHDERHAWVVDPGESAQVLDYLQKHGLVLQGILLTHHHSDHVG CCCCCCCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHCCCEEEEHHHHCCCCCCHH GVQALRQQTGAAVYGPAGEPIPEPARRLRQGDRVDVLEQQFEVIDVPGHTAGHIAYFSAA HHHHHHHHCCCEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHEEECCCCCCCCEEEEECC CPDGPLLFCGDTLFSGGCGRLFEGTPEQMLASLDTLAALPAQTQVCPAHEYTLANLRFAQ CCCCCEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEC TVEPSNEALARHVPYCEMLRAQGLPTLPSRLGLERQINPFLRSREPSVRQSLSRLPSASL CCCCCHHHHHHHCCHHHHHHHCCCCCCHHHHCCHHHCCHHHHCCCHHHHHHHHHCCCCCC GDVHVFAALREWKNNFQ CHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA