| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is catD [H]
Identifier: 187929534
GI number: 187929534
Start: 2565071
End: 2565883
Strand: Reverse
Name: catD [H]
Synonym: Rpic_2455
Alternate gene names: 187929534
Gene position: 2565883-2565071 (Counterclockwise)
Preceding gene: 187929535
Following gene: 187929533
Centisome position: 65.08
GC content: 63.84
Gene sequence:
>813_bases ATGCCCTGGCTTGAACACGATAACGTCCGCCTGTATCACGAATTCGATGACGGCCCCGCCACGGGTAAGCCGGTGCTGGT GCTGTCGAACTCCCTCGGCACCAACCTGGGCATGTGGGAGCCGCAGCTCGAAGCGTTGCGCCAGCATTTCCGCCTGCTGC GCTATGACCAGCGTGGTCACGGCCAATCGAGCGTGCCGGACGCGCCGTTTGGCGTTGCTCAACTCGGCGGTGATGTGCTC GCGTTGCTCGACCACTACAACATTGAGCTTGCGCTGTTCTGCGGTCTGTCGATGGGCGGGTTGACCGGCCTGTGGCTGGC CGCACATCACGGCGAGCGTTTCCCGCGCATGGTCGTGACGAATACCGCCGCGCTGATCGGTACGCAGCAAAGCTGGAATA CGCGCATCGCACAGGTCGAGCAGGGCGGCATGGCGAGCATTACGGAAACGGTGCTGGAGCGCTGGTTCACGCAGGGCTAC CGGGATGCCAACGCTAGCCGCGTCGACATCGTCAAGGCAATGTTGCTGTCCACGCCGGATGCCGGCTACAACGGCAACTG CGCAGCCATTCGCGATGCAGATTTGCGCGCGCAACTGCCGAACATCCGGGTGCCGATGCTGGTGATTGGCGGCACACACG ATATCTCCACCCCGGCTGCGCAGACCAAGCTCATTGCCGACGGCGTGCCCGGCGCCCAGTACATCGAGCTTTCAGCCGGC CACCTCGCCAACTGGGAGCAGGCCGACGGCTATACCGAAGCGCTCGTCAGCTTCTTGACGACCGGCGTTGCACGTGAGGG CGCCCATGGATGA
Upstream 100 bases:
>100_bases GATCCCACCCATTACCTTGGCGATGCGGGCGCCGCTGTTGACCGCGTGCTCGCAGAACACGCCCACCGCCACCCCTGAAC ACGTATTCCACGGAGACACC
Downstream 100 bases:
>100_bases TCGCGAACGCCACGCCGCAGGCATGGCGGTGCGCCGCGCCGTGCTGGGCGATGCCCACGTCGACCGTGCCAACGCCGCGC AGACCGATCTGACGGCTCCG
Product: 3-oxoadipate enol-lactonase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MPWLEHDNVRLYHEFDDGPATGKPVLVLSNSLGTNLGMWEPQLEALRQHFRLLRYDQRGHGQSSVPDAPFGVAQLGGDVL ALLDHYNIELALFCGLSMGGLTGLWLAAHHGERFPRMVVTNTAALIGTQQSWNTRIAQVEQGGMASITETVLERWFTQGY RDANASRVDIVKAMLLSTPDAGYNGNCAAIRDADLRAQLPNIRVPMLVIGGTHDISTPAAQTKLIADGVPGAQYIELSAG HLANWEQADGYTEALVSFLTTGVAREGAHG
Sequences:
>Translated_270_residues MPWLEHDNVRLYHEFDDGPATGKPVLVLSNSLGTNLGMWEPQLEALRQHFRLLRYDQRGHGQSSVPDAPFGVAQLGGDVL ALLDHYNIELALFCGLSMGGLTGLWLAAHHGERFPRMVVTNTAALIGTQQSWNTRIAQVEQGGMASITETVLERWFTQGY RDANASRVDIVKAMLLSTPDAGYNGNCAAIRDADLRAQLPNIRVPMLVIGGTHDISTPAAQTKLIADGVPGAQYIELSAG HLANWEQADGYTEALVSFLTTGVAREGAHG >Mature_269_residues PWLEHDNVRLYHEFDDGPATGKPVLVLSNSLGTNLGMWEPQLEALRQHFRLLRYDQRGHGQSSVPDAPFGVAQLGGDVLA LLDHYNIELALFCGLSMGGLTGLWLAAHHGERFPRMVVTNTAALIGTQQSWNTRIAQVEQGGMASITETVLERWFTQGYR DANASRVDIVKAMLLSTPDAGYNGNCAAIRDADLRAQLPNIRVPMLVIGGTHDISTPAAQTKLIADGVPGAQYIELSAGH LANWEQADGYTEALVSFLTTGVAREGAHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787244, Length=234, Percent_Identity=25.6410256410256, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 29252; Mature: 29121
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWLEHDNVRLYHEFDDGPATGKPVLVLSNSLGTNLGMWEPQLEALRQHFRLLRYDQRGH CCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC GQSSVPDAPFGVAQLGGDVLALLDHYNIELALFCGLSMGGLTGLWLAAHHGERFPRMVVT CCCCCCCCCCCHHHHCCHHEEHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEE NTAALIGTQQSWNTRIAQVEQGGMASITETVLERWFTQGYRDANASRVDIVKAMLLSTPD CCCCEEECCCCCCCHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC AGYNGNCAAIRDADLRAQLPNIRVPMLVIGGTHDISTPAAQTKLIADGVPGAQYIELSAG CCCCCCEEEEECCHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHEECCCCCCEEEEECCC HLANWEQADGYTEALVSFLTTGVAREGAHG CCCCCHHCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PWLEHDNVRLYHEFDDGPATGKPVLVLSNSLGTNLGMWEPQLEALRQHFRLLRYDQRGH CCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC GQSSVPDAPFGVAQLGGDVLALLDHYNIELALFCGLSMGGLTGLWLAAHHGERFPRMVVT CCCCCCCCCCCHHHHCCHHEEHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEE NTAALIGTQQSWNTRIAQVEQGGMASITETVLERWFTQGYRDANASRVDIVKAMLLSTPD CCCCEEECCCCCCCHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC AGYNGNCAAIRDADLRAQLPNIRVPMLVIGGTHDISTPAAQTKLIADGVPGAQYIELSAG CCCCCCEEEEECCHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHEECCCCCCEEEEECCC HLANWEQADGYTEALVSFLTTGVAREGAHG CCCCCHHCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]