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The map label for this gene is pcaC [H]

Identifier: 187929533

GI number: 187929533

Start: 2564680

End: 2565078

Strand: Reverse

Name: pcaC [H]

Synonym: Rpic_2454

Alternate gene names: 187929533

Gene position: 2565078-2564680 (Counterclockwise)

Preceding gene: 187929534

Following gene: 187929532

Centisome position: 65.06

GC content: 66.92

Gene sequence:

>399_bases
ATGGATGATCGCGAACGCCACGCCGCAGGCATGGCGGTGCGCCGCGCCGTGCTGGGCGATGCCCACGTCGACCGTGCCAA
CGCCGCGCAGACCGATCTGACGGCTCCGTTTCAGGACCTCATCACGCGCTACGCCTGGGGTGAAATCTGGACACGCCCCG
GCTTGCCGCGCCACACGCGCAGCTTGCTGACGATCGCCATGATGGTCGCGCTCGGCCGCGACGGCGAGTTGCGCCTGCAT
CTGCGCGCCGCTGCCAACAACGGTGTCACGCGCGACGAGATTCAGGAAACGCTGCTGCAGACCGCCATCTACTGCGGCGT
GCCGGCTGCCAACCATGCCTTCCACCTCGCCCAGACGGTGTTTGCCGAGATGGATGCGGAGGGCGCTGCGAAAAAGTAA

Upstream 100 bases:

>100_bases
GAGCTTTCAGCCGGCCACCTCGCCAACTGGGAGCAGGCCGACGGCTATACCGAAGCGCTCGTCAGCTTCTTGACGACCGG
CGTTGCACGTGAGGGCGCCC

Downstream 100 bases:

>100_bases
TACCGCCGTCTCCGGGGAGACGCCACGCAACACACCGGGCAAACCGGCCGCCGAGCTGGAAAAACCCAAGGAGGAGACCC
ATGCTCAGCGCATTGGGTGT

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MDDRERHAAGMAVRRAVLGDAHVDRANAAQTDLTAPFQDLITRYAWGEIWTRPGLPRHTRSLLTIAMMVALGRDGELRLH
LRAAANNGVTRDEIQETLLQTAIYCGVPAANHAFHLAQTVFAEMDAEGAAKK

Sequences:

>Translated_132_residues
MDDRERHAAGMAVRRAVLGDAHVDRANAAQTDLTAPFQDLITRYAWGEIWTRPGLPRHTRSLLTIAMMVALGRDGELRLH
LRAAANNGVTRDEIQETLLQTAIYCGVPAANHAFHLAQTVFAEMDAEGAAKK
>Mature_132_residues
MDDRERHAAGMAVRRAVLGDAHVDRANAAQTDLTAPFQDLITRYAWGEIWTRPGLPRHTRSLLTIAMMVALGRDGELRLH
LRAAANNGVTRDEIQETLLQTAIYCGVPAANHAFHLAQTVFAEMDAEGAAKK

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 14501; Mature: 14501

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDRERHAAGMAVRRAVLGDAHVDRANAAQTDLTAPFQDLITRYAWGEIWTRPGLPRHTR
CCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH
SLLTIAMMVALGRDGELRLHLRAAANNGVTRDEIQETLLQTAIYCGVPAANHAFHLAQTV
HHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FAEMDAEGAAKK
HHHHCCCCCCCC
>Mature Secondary Structure
MDDRERHAAGMAVRRAVLGDAHVDRANAAQTDLTAPFQDLITRYAWGEIWTRPGLPRHTR
CCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH
SLLTIAMMVALGRDGELRLHLRAAANNGVTRDEIQETLLQTAIYCGVPAANHAFHLAQTV
HHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FAEMDAEGAAKK
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]