| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929175
Identifier: 187929175
GI number: 187929175
Start: 2208886
End: 2209914
Strand: Direct
Name: 187929175
Synonym: Rpic_2096
Alternate gene names: NA
Gene position: 2208886-2209914 (Clockwise)
Preceding gene: 187929174
Following gene: 187929176
Centisome position: 56.03
GC content: 68.8
Gene sequence:
>1029_bases ATGATCCCGCTCGCCCTCTCTCACTGGCTGCGGCCGCGCGCGGTGCCGCAACCGCAAGCGCAGCCGCAACCCGCTCCGGC CCTCGCTGAACAACTGCGTGAAGAGTGCGAGGCCATGGCGCGCTATGCCCTGCACCACGGCCTGCCGGTCGCGCCGGAAC TCATCGCTCAGCTCGGCGCGCTCATCGACGGCCAGATGCCGGCGCATGCTGCGCCGCACCACGCGTTGGCGGCCATCCAC CGCAAGCTTGCAGCCGCCATTGCACCGGCCACGCCGCAGGCCGTCACGCTGCTCGACGCGCAGCATCGCAGCGCTCATCC ATTCGCGTGGCTTGGTCCTGTACCGTTGATCCGGCTGCTGACCGGCGCCGCGATCGTCTTCCTGGTCGCAGTGATTGCCA CCGGCATGTCGCCCGACGTGTCGAGCGCGAACATCGACCGGGGCTTCCTGGATTCGGACGGCGCGCCCCTGCTATGGAAC ACGCTGTTCCTGCTGTTCTGCGCGGGGTTGGGCGCGTCGTTTGCCACGCTGTTTCAGGCGCATCGCTATGTGGCCGCGTC CACGTACGACCCGAAGTACGACGCCTCTTACGGCGCACGGTTGATCCTCGGCGTGATTGCCGGGCTGATCCTCGTCGAAA TGCTGCCGGCGCAGTTGTTCGACCAGGGCAGCATGCACAGCTTCGGCAAACCGGCGCTTGCCATGCTGGGCGGCTTCTCT GCCACCGCTGTGCACCGGCTGCTTCAGCGGCTGGTGGACGCGCTCGAAACACTCGTACGCGGCGATCGATCGGCCGATGC CGACGCCGCCATGCAGGCCTACCGCGCCCGCGCCGCCAGCGAGCGCACGCAGTGGCAAAGCGAACTCGCCGCCAACCTGA TCGATCTGCAGCAATCGCTCGACGGCACTGCCTCTCCCGAGGCGATGCGCAAACGCCTGGCCGACTTCACGCGCGCCATG CTCGCCGCCAGCGACCCCGCGGCCGCCCCGCCGCCCTCTCTCTCGGCCGGCGGCACTTCCAAGGAGTGA
Upstream 100 bases:
>100_bases TGCCGACGAAGGTCACCATGCAAGCAAAGACCTCAGACTTGCGGCGCAGCCTGTTCGGCGCCGCCATGCCACACAAGCCA GTCAGTAGCGGAAGGCCCGC
Downstream 100 bases:
>100_bases CCTCATGCTGTTCCTCTACAACATCCCCGCATGGGCAATGGGCACAGTCATCGTGTTCGCGACGCTCCTCGTGGCGTTGG CCGGCTACGCGCTGTTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MIPLALSHWLRPRAVPQPQAQPQPAPALAEQLREECEAMARYALHHGLPVAPELIAQLGALIDGQMPAHAAPHHALAAIH RKLAAAIAPATPQAVTLLDAQHRSAHPFAWLGPVPLIRLLTGAAIVFLVAVIATGMSPDVSSANIDRGFLDSDGAPLLWN TLFLLFCAGLGASFATLFQAHRYVAASTYDPKYDASYGARLILGVIAGLILVEMLPAQLFDQGSMHSFGKPALAMLGGFS ATAVHRLLQRLVDALETLVRGDRSADADAAMQAYRARAASERTQWQSELAANLIDLQQSLDGTASPEAMRKRLADFTRAM LAASDPAAAPPPSLSAGGTSKE
Sequences:
>Translated_342_residues MIPLALSHWLRPRAVPQPQAQPQPAPALAEQLREECEAMARYALHHGLPVAPELIAQLGALIDGQMPAHAAPHHALAAIH RKLAAAIAPATPQAVTLLDAQHRSAHPFAWLGPVPLIRLLTGAAIVFLVAVIATGMSPDVSSANIDRGFLDSDGAPLLWN TLFLLFCAGLGASFATLFQAHRYVAASTYDPKYDASYGARLILGVIAGLILVEMLPAQLFDQGSMHSFGKPALAMLGGFS ATAVHRLLQRLVDALETLVRGDRSADADAAMQAYRARAASERTQWQSELAANLIDLQQSLDGTASPEAMRKRLADFTRAM LAASDPAAAPPPSLSAGGTSKE >Mature_342_residues MIPLALSHWLRPRAVPQPQAQPQPAPALAEQLREECEAMARYALHHGLPVAPELIAQLGALIDGQMPAHAAPHHALAAIH RKLAAAIAPATPQAVTLLDAQHRSAHPFAWLGPVPLIRLLTGAAIVFLVAVIATGMSPDVSSANIDRGFLDSDGAPLLWN TLFLLFCAGLGASFATLFQAHRYVAASTYDPKYDASYGARLILGVIAGLILVEMLPAQLFDQGSMHSFGKPALAMLGGFS ATAVHRLLQRLVDALETLVRGDRSADADAAMQAYRARAASERTQWQSELAANLIDLQQSLDGTASPEAMRKRLADFTRAM LAASDPAAAPPPSLSAGGTSKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36192; Mature: 36192
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPLALSHWLRPRAVPQPQAQPQPAPALAEQLREECEAMARYALHHGLPVAPELIAQLGA CCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LIDGQMPAHAAPHHALAAIHRKLAAAIAPATPQAVTLLDAQHRSAHPFAWLGPVPLIRLL HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH TGAAIVFLVAVIATGMSPDVSSANIDRGFLDSDGAPLLWNTLFLLFCAGLGASFATLFQA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HRYVAASTYDPKYDASYGARLILGVIAGLILVEMLPAQLFDQGSMHSFGKPALAMLGGFS HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCH ATAVHRLLQRLVDALETLVRGDRSADADAAMQAYRARAASERTQWQSELAANLIDLQQSL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DGTASPEAMRKRLADFTRAMLAASDPAAAPPPSLSAGGTSKE CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIPLALSHWLRPRAVPQPQAQPQPAPALAEQLREECEAMARYALHHGLPVAPELIAQLGA CCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LIDGQMPAHAAPHHALAAIHRKLAAAIAPATPQAVTLLDAQHRSAHPFAWLGPVPLIRLL HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH TGAAIVFLVAVIATGMSPDVSSANIDRGFLDSDGAPLLWNTLFLLFCAGLGASFATLFQA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HRYVAASTYDPKYDASYGARLILGVIAGLILVEMLPAQLFDQGSMHSFGKPALAMLGGFS HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCH ATAVHRLLQRLVDALETLVRGDRSADADAAMQAYRARAASERTQWQSELAANLIDLQQSL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DGTASPEAMRKRLADFTRAMLAASDPAAAPPPSLSAGGTSKE CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA