| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929176
Identifier: 187929176
GI number: 187929176
Start: 2209919
End: 2210722
Strand: Direct
Name: 187929176
Synonym: Rpic_2097
Alternate gene names: NA
Gene position: 2209919-2210722 (Clockwise)
Preceding gene: 187929175
Following gene: 187929179
Centisome position: 56.05
GC content: 64.3
Gene sequence:
>804_bases ATGCTGTTCCTCTACAACATCCCCGCATGGGCAATGGGCACAGTCATCGTGTTCGCGACGCTCCTCGTGGCGTTGGCCGG CTACGCGCTGTTCCGCCGCATTTTTCCGGTCACGCTCGACGCCGAACAACGCAACATGACCATCGCCATGATGACGGCCG TCACCACCATCAACTCGTTGCTGGTCGCGTTCTCGGCCATCTCGGTGTGGGGCGCCTATCAAGCCGCCGCGGACATCGTG GCCGCCGAAGCTGCGTGCGCCACGGAACTTGCCCGCGACCTTTCGGCGTTCTCGCACCCGAGCGCTGCTGCCGCGCGGCG CGAGTTGATCATGTATCTGGACCGCGTCGTCCACGACGAATGGCCGAGCATGCAGCAGCAAGCGCGCCCGGATGCCGGTA CGGAAGTCGCATTCAACAGCATGTTCGCCACGGCCAACCGCATCACGCCGCGTGACGACCGCGAGCGCGTGTTGCTGATC GAAGTGCTCGCCCGCGTCAACGAGATGGTGAAGTACCGCGAGAAACGCCTGCAGAACCTGGAAGCCGCCATGCCCGGCAC GCTGTGGGGCGTGATGTTGATCGCCAGCGGCTTGTCGCTGGTGCTGCTCTATGCGCTGCCGGCCACGCGCTTTTACATGG CGCTGGTGGTGGTGTGGGCGGCCACGCTGGGCCTGGCGTTCTTTTTTGTGCTGGCCGTGGACCGGCCCTTTGCAGGCGAA GTCAGCGTCAGTGCGGCGCCGCTTGAGCGGGCCATCCAGACGCTATCGAACGACAAGCCGCAAATGAATCCGTTACCGGA CTGA
Upstream 100 bases:
>100_bases CGCCTGGCCGACTTCACGCGCGCCATGCTCGCCGCCAGCGACCCCGCGGCCGCCCCGCCGCCCTCTCTCTCGGCCGGCGG CACTTCCAAGGAGTGACCTC
Downstream 100 bases:
>100_bases GGCGCGCCACTTCGCCGCGCTGCCTCCACTCGCGATGTGGGCTGGCGGGAGAGGCCAGCCCCGGGGCCGAAGCCCCACAC TTCGGCCCTGCCCTTTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MLFLYNIPAWAMGTVIVFATLLVALAGYALFRRIFPVTLDAEQRNMTIAMMTAVTTINSLLVAFSAISVWGAYQAAADIV AAEAACATELARDLSAFSHPSAAAARRELIMYLDRVVHDEWPSMQQQARPDAGTEVAFNSMFATANRITPRDDRERVLLI EVLARVNEMVKYREKRLQNLEAAMPGTLWGVMLIASGLSLVLLYALPATRFYMALVVVWAATLGLAFFFVLAVDRPFAGE VSVSAAPLERAIQTLSNDKPQMNPLPD
Sequences:
>Translated_267_residues MLFLYNIPAWAMGTVIVFATLLVALAGYALFRRIFPVTLDAEQRNMTIAMMTAVTTINSLLVAFSAISVWGAYQAAADIV AAEAACATELARDLSAFSHPSAAAARRELIMYLDRVVHDEWPSMQQQARPDAGTEVAFNSMFATANRITPRDDRERVLLI EVLARVNEMVKYREKRLQNLEAAMPGTLWGVMLIASGLSLVLLYALPATRFYMALVVVWAATLGLAFFFVLAVDRPFAGE VSVSAAPLERAIQTLSNDKPQMNPLPD >Mature_267_residues MLFLYNIPAWAMGTVIVFATLLVALAGYALFRRIFPVTLDAEQRNMTIAMMTAVTTINSLLVAFSAISVWGAYQAAADIV AAEAACATELARDLSAFSHPSAAAARRELIMYLDRVVHDEWPSMQQQARPDAGTEVAFNSMFATANRITPRDDRERVLLI EVLARVNEMVKYREKRLQNLEAAMPGTLWGVMLIASGLSLVLLYALPATRFYMALVVVWAATLGLAFFFVLAVDRPFAGE VSVSAAPLERAIQTLSNDKPQMNPLPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29333; Mature: 29333
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLYNIPAWAMGTVIVFATLLVALAGYALFRRIFPVTLDAEQRNMTIAMMTAVTTINSL CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHCHHHHHHHHHHHHHHH LVAFSAISVWGAYQAAADIVAAEAACATELARDLSAFSHPSAAAARRELIMYLDRVVHDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC WPSMQQQARPDAGTEVAFNSMFATANRITPRDDRERVLLIEVLARVNEMVKYREKRLQNL CCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAMPGTLWGVMLIASGLSLVLLYALPATRFYMALVVVWAATLGLAFFFVLAVDRPFAGE HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VSVSAAPLERAIQTLSNDKPQMNPLPD CCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLFLYNIPAWAMGTVIVFATLLVALAGYALFRRIFPVTLDAEQRNMTIAMMTAVTTINSL CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHCHHHHHHHHHHHHHHH LVAFSAISVWGAYQAAADIVAAEAACATELARDLSAFSHPSAAAARRELIMYLDRVVHDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC WPSMQQQARPDAGTEVAFNSMFATANRITPRDDRERVLLIEVLARVNEMVKYREKRLQNL CCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAMPGTLWGVMLIASGLSLVLLYALPATRFYMALVVVWAATLGLAFFFVLAVDRPFAGE HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VSVSAAPLERAIQTLSNDKPQMNPLPD CCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA