| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is iorA [H]
Identifier: 187929170
GI number: 187929170
Start: 2202825
End: 2203292
Strand: Reverse
Name: iorA [H]
Synonym: Rpic_2091
Alternate gene names: 187929170
Gene position: 2203292-2202825 (Counterclockwise)
Preceding gene: 187929171
Following gene: 187929169
Centisome position: 55.88
GC content: 67.74
Gene sequence:
>468_bases ATGGAACTGGACGTCAACCACAAGCCGGTCAGCGTTGATTGCGACCCGGCCACGCCGCTACTGTGGGTGCTGCGTGATCA CCTGAACCTGACCGGTACGAAGTTCGGCTGCGGCGTCGCGGCGTGCGGCGCATGCACCGTACACGTGGACGGCGCGGCCG TGCGGTCGTGCGTGCTGCCGGTGGCGGCTGTGGCCGGCAAGCACATCACCACCATCGAAGGACTTGCCGGCGGCGGGGGC AAACGCCACGCGCTGCAGCAAGCCTGGATTGACGAGCAGGTGCCCCAGTGCGGCTACTGCCAGTCCGGCATGCTCATGGC CGCGGCGGACTTGCTGGCCCAACACCCTGACCCGACGGATGCCGACATCGACGCGGCCATGACCAACATCTGCCGTTGTG GCACATATCCGCGCATGCGCGCCGCTATCAAGCGCGCTGCCAAGGCGTTGCGGGAGGGCCGCGCATGA
Upstream 100 bases:
>100_bases ATGTTGCCATGTCGAGGTGGACCACTATTGCTGACCTCAGCCGTTTGAACGTACGCTTGGCCAGCAAAAAAGAATCACAA CACAAGGAGACCACCGCCCC
Downstream 100 bases:
>100_bases ACGCGAAGACTACAAAACCGCGCAGCGGACGCCGCCGTTTCCTGCTCGGCGCACTCGGCATTGGTGGCGCACTGGTAGTC GGTTGGGGTGTGATGCCGCC
Product: (2Fe-2S)-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MELDVNHKPVSVDCDPATPLLWVLRDHLNLTGTKFGCGVAACGACTVHVDGAAVRSCVLPVAAVAGKHITTIEGLAGGGG KRHALQQAWIDEQVPQCGYCQSGMLMAAADLLAQHPDPTDADIDAAMTNICRCGTYPRMRAAIKRAAKALREGRA
Sequences:
>Translated_155_residues MELDVNHKPVSVDCDPATPLLWVLRDHLNLTGTKFGCGVAACGACTVHVDGAAVRSCVLPVAAVAGKHITTIEGLAGGGG KRHALQQAWIDEQVPQCGYCQSGMLMAAADLLAQHPDPTDADIDAAMTNICRCGTYPRMRAAIKRAAKALREGRA >Mature_155_residues MELDVNHKPVSVDCDPATPLLWVLRDHLNLTGTKFGCGVAACGACTVHVDGAAVRSCVLPVAAVAGKHITTIEGLAGGGG KRHALQQAWIDEQVPQCGYCQSGMLMAAADLLAQHPDPTDADIDAAMTNICRCGTYPRMRAAIKRAAKALREGRA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=140, Percent_Identity=35, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI71773480, Length=152, Percent_Identity=33.5526315789474, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786480, Length=167, Percent_Identity=37.7245508982036, Blast_Score=98, Evalue=2e-22, Organism=Escherichia coli, GI1789232, Length=139, Percent_Identity=40.2877697841727, Blast_Score=92, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17540638, Length=143, Percent_Identity=40.5594405594406, Blast_Score=106, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17539860, Length=146, Percent_Identity=36.3013698630137, Blast_Score=94, Evalue=4e-20, Organism=Caenorhabditis elegans, GI32566215, Length=145, Percent_Identity=37.2413793103448, Blast_Score=90, Evalue=5e-19, Organism=Drosophila melanogaster, GI17737937, Length=158, Percent_Identity=34.8101265822785, Blast_Score=88, Evalue=3e-18, Organism=Drosophila melanogaster, GI24647197, Length=162, Percent_Identity=32.7160493827161, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI24647195, Length=162, Percent_Identity=32.7160493827161, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24647201, Length=152, Percent_Identity=33.5526315789474, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI24647193, Length=136, Percent_Identity=33.0882352941176, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24647199, Length=155, Percent_Identity=32.258064516129, Blast_Score=66, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 16260; Mature: 16260
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELDVNHKPVSVDCDPATPLLWVLRDHLNLTGTKFGCGVAACGACTVHVDGAAVRSCVLP CCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHCCEEEEEECHHHHHHHHHH VAAVAGKHITTIEGLAGGGGKRHALQQAWIDEQVPQCGYCQSGMLMAAADLLAQHPDPTD HHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC ADIDAAMTNICRCGTYPRMRAAIKRAAKALREGRA CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MELDVNHKPVSVDCDPATPLLWVLRDHLNLTGTKFGCGVAACGACTVHVDGAAVRSCVLP CCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHCCEEEEEECHHHHHHHHHH VAAVAGKHITTIEGLAGGGGKRHALQQAWIDEQVPQCGYCQSGMLMAAADLLAQHPDPTD HHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC ADIDAAMTNICRCGTYPRMRAAIKRAAKALREGRA CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]