| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is iorB [H]
Identifier: 187929169
GI number: 187929169
Start: 2200531
End: 2202828
Strand: Reverse
Name: iorB [H]
Synonym: Rpic_2090
Alternate gene names: 187929169
Gene position: 2202828-2200531 (Counterclockwise)
Preceding gene: 187929170
Following gene: 187929156
Centisome position: 55.87
GC content: 66.8
Gene sequence:
>2298_bases ATGAACGCGAAGACTACAAAACCGCGCAGCGGACGCCGCCGTTTCCTGCTCGGCGCACTCGGCATTGGTGGCGCACTGGT AGTCGGTTGGGGTGTGATGCCGCCGCGCAGCCGCGTGGGCGATCCGGGCATCTTCCCCGAGCACAACGGCGAGATTGCCC TCAACGGCTGGATCAAGATCACGCCCGAAGGCAACGTCGTGCTTGCCATGCCGCGCGTGGAGATGGGCCAGGGCATCCAC ACTGCGCTGTCGATGCTGGCAGCCGAAGAGCTGGACATTCCGCTCGCGCGCGTGCGCATCGAAAGCGCGCCCGTGGAGCG CATCTACGGCAACGTCGTCGCCATGGGCGACAGCTCGCTGCCGCTGCATCCCGATAGCGCAGACAAGACCTGGGCACGCG CACTGCACTGGATCATGGCCAAGAGCGCGCGCGAGATCGGCCTCATCATTACCGGCGGCAGCAGCAGCACCGCCGATGGC TGGCAGCCCGTGCGCGAGGCCGCCGCCACGGCGCGTGCGGCGCTGGTGGAAGCCGCGGCGCGCGAATGGAATGCGCCAGT TGCGCAAGTCAGCATCCGTGAAGGCCAGTTGATCGGCCCCGGCGGCAAGCAGTCCACGTTTGGCGAGATGGCCAAATCGG CGCGTGGTCTCTCTGCGCCGTCCAACGTGACGCTCAAGCCGGCCTCGCAATTCCAGTTGATCGGCAAACCGGCGCCGCGC AACGATCTCGCCGCGAAGACGGATGGCAGCGCGCGCTTCTCCATCGACACGCGCCTGCCCGGCATGTTGTATGCCGCTGT CGTGATGTGTCCGGCGTTTGGCGGCAAGCTCAAGACGTTCCAGTCGAAAGCGGCGCTTGGCATGCCGGGCGTGCGTTACG TGGTGCCGTTCGAGGGCACGGGCGGTGGTGCGCCGGGCGTGGCCGTGGTGGCAGACCATTACTGGCAGGCCCGGCAGGCG CTGGCAACGCTTGAGCCCGTGTGGGACAACGGCCCGCATGCCAAGCTCGACTCCGCGGGCATTCGGCAGCAGCTTGTCAG CGCCCTCGACAGTGACAAGGGCGGCTTCACGTATCGATCGATGGGCGACGGCCTGAAAGCCTTCGACAAGGCTGATGGCG CCACCCTCGTCGAGGCCGAATACAGCGCGCCGTATCTCGCGCACGCCACGATGGAACCGATTAACTGCACCGCGCAGGTG ACGCCGGAAGGCGTGCATCTCTGGGCGCCCACGCAGGTCGCCACGCTGGCGCAGCTTGTGGCGGCGCGTGCGGCAGGTGT CAGCGGCGACAAGGTGCAGATCGATATCCCGCTCATCGGCGGCGGTTTCGGGCGGCGGCTGGAATCGGATTTCATCGGTC AGGCCGTCACCATCGCCACCAAGACCGACGGCAAGCCCGTGCAGGTCATCTGGTCGCGCGAAGAAGACGTCCGCCACGAC TTCTATCGCCCGCACGCCATCGCCCGGCTCAAGGCGCGTGTCGAGAACGGCAAGGTCACCGCGATTGCCTCGCGCAGCGC CGGCCAATCGATTCTCGCGGGCGAACTGGACCGTCTGTTCGGTGCGCCGTCAGTGGGCATCGATCGCTACACCGCTGAAG GCCTGTTCGACCTGCCGTACGAAATCGAGCACGAGCACATCGCGCACCTGGCAGTCGATCTGCCGGTTCCCGTAGGCTTC TGGCGCAGCGTGGGGCATTCGTACAACGGGTTCTTCATGGAGGGCTTTCTCAACGAGGTGGCGGCCGCGGCCAAGCTTGA CCCGTTGGCGATGCGGCGTGACTTGCTGAAGGACCATCCGCGCGAGCTGAAGGTGCTGGACACGGCAGCGCAGGCCGCCG GCTGGGGGCAGCCGCTGGCACCAGCCGCTGACGGCGCACCGCGTGCGCGCGGCATTGCGCTGCACCCGAGCTTCGGCTCC GTGGTCGCGCAGGTGGTGGAGGTGTCGATGAAAGACGGCAAGCCACGCGTGCATCGCGTTGTGTGCGCAGTCGATTGCGG CACGGTGGTCAACCCGGGCATCGTTGCGCAGCAGATGGAAAGCGCGGTCATCTTTGGCCTGACGGCGGCGCTGTATGGCC GGATCGACATCAAGGACGGCCAGGTCGTGCAGTCGAACTTCCCCGATTACCCGGCGCTCAAGATGGCAGAGACGCCCGTC ATCGAAACGCACATCGTACCCAGCACGGCAGAACCCAGCGGCATGGGCGAGGTGGGTGTGCCGCCAATCGGGCCGGCCGT GGCCCATGCCGTGGCGCAGTTGACGGGCAAACCGGTGAGGCAGTTGCCAATGGCGTGA
Upstream 100 bases:
>100_bases ACATCGACGCGGCCATGACCAACATCTGCCGTTGTGGCACATATCCGCGCATGCGCGCCGCTATCAAGCGCGCTGCCAAG GCGTTGCGGGAGGGCCGCGC
Downstream 100 bases:
>100_bases CGCCGCTGCGCTGAAATGAAAAAGCCGCAGGTGTGCGCCTGCGGCTTTTTCTTTGGAGCGATGCCGCCTGGCTCAGGCCG CGTCCGGAAACACGGGTTCG
Product: molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 765; Mature: 765
Protein sequence:
>765_residues MNAKTTKPRSGRRRFLLGALGIGGALVVGWGVMPPRSRVGDPGIFPEHNGEIALNGWIKITPEGNVVLAMPRVEMGQGIH TALSMLAAEELDIPLARVRIESAPVERIYGNVVAMGDSSLPLHPDSADKTWARALHWIMAKSAREIGLIITGGSSSTADG WQPVREAAATARAALVEAAAREWNAPVAQVSIREGQLIGPGGKQSTFGEMAKSARGLSAPSNVTLKPASQFQLIGKPAPR NDLAAKTDGSARFSIDTRLPGMLYAAVVMCPAFGGKLKTFQSKAALGMPGVRYVVPFEGTGGGAPGVAVVADHYWQARQA LATLEPVWDNGPHAKLDSAGIRQQLVSALDSDKGGFTYRSMGDGLKAFDKADGATLVEAEYSAPYLAHATMEPINCTAQV TPEGVHLWAPTQVATLAQLVAARAAGVSGDKVQIDIPLIGGGFGRRLESDFIGQAVTIATKTDGKPVQVIWSREEDVRHD FYRPHAIARLKARVENGKVTAIASRSAGQSILAGELDRLFGAPSVGIDRYTAEGLFDLPYEIEHEHIAHLAVDLPVPVGF WRSVGHSYNGFFMEGFLNEVAAAAKLDPLAMRRDLLKDHPRELKVLDTAAQAAGWGQPLAPAADGAPRARGIALHPSFGS VVAQVVEVSMKDGKPRVHRVVCAVDCGTVVNPGIVAQQMESAVIFGLTAALYGRIDIKDGQVVQSNFPDYPALKMAETPV IETHIVPSTAEPSGMGEVGVPPIGPAVAHAVAQLTGKPVRQLPMA
Sequences:
>Translated_765_residues MNAKTTKPRSGRRRFLLGALGIGGALVVGWGVMPPRSRVGDPGIFPEHNGEIALNGWIKITPEGNVVLAMPRVEMGQGIH TALSMLAAEELDIPLARVRIESAPVERIYGNVVAMGDSSLPLHPDSADKTWARALHWIMAKSAREIGLIITGGSSSTADG WQPVREAAATARAALVEAAAREWNAPVAQVSIREGQLIGPGGKQSTFGEMAKSARGLSAPSNVTLKPASQFQLIGKPAPR NDLAAKTDGSARFSIDTRLPGMLYAAVVMCPAFGGKLKTFQSKAALGMPGVRYVVPFEGTGGGAPGVAVVADHYWQARQA LATLEPVWDNGPHAKLDSAGIRQQLVSALDSDKGGFTYRSMGDGLKAFDKADGATLVEAEYSAPYLAHATMEPINCTAQV TPEGVHLWAPTQVATLAQLVAARAAGVSGDKVQIDIPLIGGGFGRRLESDFIGQAVTIATKTDGKPVQVIWSREEDVRHD FYRPHAIARLKARVENGKVTAIASRSAGQSILAGELDRLFGAPSVGIDRYTAEGLFDLPYEIEHEHIAHLAVDLPVPVGF WRSVGHSYNGFFMEGFLNEVAAAAKLDPLAMRRDLLKDHPRELKVLDTAAQAAGWGQPLAPAADGAPRARGIALHPSFGS VVAQVVEVSMKDGKPRVHRVVCAVDCGTVVNPGIVAQQMESAVIFGLTAALYGRIDIKDGQVVQSNFPDYPALKMAETPV IETHIVPSTAEPSGMGEVGVPPIGPAVAHAVAQLTGKPVRQLPMA >Mature_765_residues MNAKTTKPRSGRRRFLLGALGIGGALVVGWGVMPPRSRVGDPGIFPEHNGEIALNGWIKITPEGNVVLAMPRVEMGQGIH TALSMLAAEELDIPLARVRIESAPVERIYGNVVAMGDSSLPLHPDSADKTWARALHWIMAKSAREIGLIITGGSSSTADG WQPVREAAATARAALVEAAAREWNAPVAQVSIREGQLIGPGGKQSTFGEMAKSARGLSAPSNVTLKPASQFQLIGKPAPR NDLAAKTDGSARFSIDTRLPGMLYAAVVMCPAFGGKLKTFQSKAALGMPGVRYVVPFEGTGGGAPGVAVVADHYWQARQA LATLEPVWDNGPHAKLDSAGIRQQLVSALDSDKGGFTYRSMGDGLKAFDKADGATLVEAEYSAPYLAHATMEPINCTAQV TPEGVHLWAPTQVATLAQLVAARAAGVSGDKVQIDIPLIGGGFGRRLESDFIGQAVTIATKTDGKPVQVIWSREEDVRHD FYRPHAIARLKARVENGKVTAIASRSAGQSILAGELDRLFGAPSVGIDRYTAEGLFDLPYEIEHEHIAHLAVDLPVPVGF WRSVGHSYNGFFMEGFLNEVAAAAKLDPLAMRRDLLKDHPRELKVLDTAAQAAGWGQPLAPAADGAPRARGIALHPSFGS VVAQVVEVSMKDGKPRVHRVVCAVDCGTVVNPGIVAQQMESAVIFGLTAALYGRIDIKDGQVVQSNFPDYPALKMAETPV IETHIVPSTAEPSGMGEVGVPPIGPAVAHAVAQLTGKPVRQLPMA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=431, Percent_Identity=24.8259860788863, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 80845; Mature: 80845
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKTTKPRSGRRRFLLGALGIGGALVVGWGVMPPRSRVGDPGIFPEHNGEIALNGWIKI CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHCCCCCCCCCCCCCCEEEECEEEE TPEGNVVLAMPRVEMGQGIHTALSMLAAEELDIPLARVRIESAPVERIYGNVVAMGDSSL CCCCCEEEEECCHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCEEEECCCCC PLHPDSADKTWARALHWIMAKSAREIGLIITGGSSSTADGWQPVREAAATARAALVEAAA CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH REWNAPVAQVSIREGQLIGPGGKQSTFGEMAKSARGLSAPSNVTLKPASQFQLIGKPAPR HHCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCHHEEEECCCCCC NDLAAKTDGSARFSIDTRLPGMLYAAVVMCPAFGGKLKTFQSKAALGMPGVRYVVPFEGT CCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCC GGGAPGVAVVADHYWQARQALATLEPVWDNGPHAKLDSAGIRQQLVSALDSDKGGFTYRS CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEHH MGDGLKAFDKADGATLVEAEYSAPYLAHATMEPINCTAQVTPEGVHLWAPTQVATLAQLV HCCCHHHHHCCCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEECCHHHHHHHHHH AARAAGVSGDKVQIDIPLIGGGFGRRLESDFIGQAVTIATKTDGKPVQVIWSREEDVRHD HHHHCCCCCCEEEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCHHHHHH FYRPHAIARLKARVENGKVTAIASRSAGQSILAGELDRLFGAPSVGIDRYTAEGLFDLPY HCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC EIEHEHIAHLAVDLPVPVGFWRSVGHSYNGFFMEGFLNEVAAAAKLDPLAMRRDLLKDHP CCCCHHEEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC RELKVLDTAAQAAGWGQPLAPAADGAPRARGIALHPSFGSVVAQVVEVSMKDGKPRVHRV CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCEEEE VCAVDCGTVVNPGIVAQQMESAVIFGLTAALYGRIDIKDGQVVQSNFPDYPALKMAETPV EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCEECCCCC IETHIVPSTAEPSGMGEVGVPPIGPAVAHAVAQLTGKPVRQLPMA EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCC >Mature Secondary Structure MNAKTTKPRSGRRRFLLGALGIGGALVVGWGVMPPRSRVGDPGIFPEHNGEIALNGWIKI CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHCCCCCCCCCCCCCCEEEECEEEE TPEGNVVLAMPRVEMGQGIHTALSMLAAEELDIPLARVRIESAPVERIYGNVVAMGDSSL CCCCCEEEEECCHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCEEEECCCCC PLHPDSADKTWARALHWIMAKSAREIGLIITGGSSSTADGWQPVREAAATARAALVEAAA CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH REWNAPVAQVSIREGQLIGPGGKQSTFGEMAKSARGLSAPSNVTLKPASQFQLIGKPAPR HHCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCHHEEEECCCCCC NDLAAKTDGSARFSIDTRLPGMLYAAVVMCPAFGGKLKTFQSKAALGMPGVRYVVPFEGT CCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCC GGGAPGVAVVADHYWQARQALATLEPVWDNGPHAKLDSAGIRQQLVSALDSDKGGFTYRS CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEHH MGDGLKAFDKADGATLVEAEYSAPYLAHATMEPINCTAQVTPEGVHLWAPTQVATLAQLV HCCCHHHHHCCCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEECCHHHHHHHHHH AARAAGVSGDKVQIDIPLIGGGFGRRLESDFIGQAVTIATKTDGKPVQVIWSREEDVRHD HHHHCCCCCCEEEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCHHHHHH FYRPHAIARLKARVENGKVTAIASRSAGQSILAGELDRLFGAPSVGIDRYTAEGLFDLPY HCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC EIEHEHIAHLAVDLPVPVGFWRSVGHSYNGFFMEGFLNEVAAAAKLDPLAMRRDLLKDHP CCCCHHEEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC RELKVLDTAAQAAGWGQPLAPAADGAPRARGIALHPSFGSVVAQVVEVSMKDGKPRVHRV CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCEEEE VCAVDCGTVVNPGIVAQQMESAVIFGLTAALYGRIDIKDGQVVQSNFPDYPALKMAETPV EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCEECCCCC IETHIVPSTAEPSGMGEVGVPPIGPAVAHAVAQLTGKPVRQLPMA EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]