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The map label for this gene is yggA [C]

Identifier: 187929090

GI number: 187929090

Start: 2117009

End: 2117650

Strand: Reverse

Name: yggA [C]

Synonym: Rpic_2011

Alternate gene names: 187929090

Gene position: 2117650-2117009 (Counterclockwise)

Preceding gene: 187929092

Following gene: 187929087

Centisome position: 53.71

GC content: 66.67

Gene sequence:

>642_bases
ATGACGACCTCGATAGCGACTTCCTCTTCCGTCTTCCTGCAGGGCCTGGCCCTGAGCCTGGGCCTGATCGTGGCCATCGG
CGCGCAGAACGCGTTCGTGCTACGTCAGGGCCTGCGCCGTGAGCATGTGGGCAGCGTCGTGCTGTTCTGTGCGATGGCCG
ATGCGGTGCTGATCCTGGCGGGCGTGCTTGGTATGGCGCAGGCCCTGGGCGAGCGGCCCAGTCTCGCGCGATTCCTCGGG
TTGGCGGGCGCCGCATTCCTGTTGCTGTATGGCGTGCAGGCGCTGCGGCGGGCCCGGCATTCCAACCAGTTACGGGCCGT
CGCGGGCGGAGATGGCCTCAGCCGGCGCGCAGCGTTGGCGCAGGCGGCAGCTTTTACGCTGCTCAATCCGCATGTGTATC
TGGACACGGTGCTGCTCGTGGGCAGCATTGGCGCGCAGCAAGCCTCGGCATTGCGTGGCTGGTTTGTGGCGGGGGCAGGG
TCGGCCAGCCTGTTCTGGTTTGTATCGCTGGGGTTTGGCGCGCGCTGGCTCGCACCGTGGTTTGCCCGGCCCAAGGCGTG
GCAGGTATTGGATGGGTTGATTGGCGTGACGATGCTGGTGCTGTCCGCCTTGCTGCTGCATCACGCCCTGCGCGGATTTT
GA

Upstream 100 bases:

>100_bases
GCCGCCAGGGCGGAATAATCCAGCACGTGAGTTAGGAAAACTGAATCAAATGAAGAAAAGATAGTTTGTCTTCATTCAAT
CGGGCCGGCAAGCTGCGCGC

Downstream 100 bases:

>100_bases
TTCGATTCCGCTACCCGTTACGCCACCGCCGCCAGCACGCCCTTGCGCGCGCGGAGGACCCCCAGCGACTTCAACAGCGC
ATGCCCCTGCAGCGTGACGC

Product: Lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTTSIATSSSVFLQGLALSLGLIVAIGAQNAFVLRQGLRREHVGSVVLFCAMADAVLILAGVLGMAQALGERPSLARFLG
LAGAAFLLLYGVQALRRARHSNQLRAVAGGDGLSRRAALAQAAAFTLLNPHVYLDTVLLVGSIGAQQASALRGWFVAGAG
SASLFWFVSLGFGARWLAPWFARPKAWQVLDGLIGVTMLVLSALLLHHALRGF

Sequences:

>Translated_213_residues
MTTSIATSSSVFLQGLALSLGLIVAIGAQNAFVLRQGLRREHVGSVVLFCAMADAVLILAGVLGMAQALGERPSLARFLG
LAGAAFLLLYGVQALRRARHSNQLRAVAGGDGLSRRAALAQAAAFTLLNPHVYLDTVLLVGSIGAQQASALRGWFVAGAG
SASLFWFVSLGFGARWLAPWFARPKAWQVLDGLIGVTMLVLSALLLHHALRGF
>Mature_212_residues
TTSIATSSSVFLQGLALSLGLIVAIGAQNAFVLRQGLRREHVGSVVLFCAMADAVLILAGVLGMAQALGERPSLARFLGL
AGAAFLLLYGVQALRRARHSNQLRAVAGGDGLSRRAALAQAAAFTLLNPHVYLDTVLLVGSIGAQQASALRGWFVAGAGS
ASLFWFVSLGFGARWLAPWFARPKAWQVLDGLIGVTMLVLSALLLHHALRGF

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=189, Percent_Identity=41.2698412698413, Blast_Score=120, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22346; Mature: 22214

Theoretical pI: Translated: 12.21; Mature: 12.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSIATSSSVFLQGLALSLGLIVAIGAQNAFVLRQGLRREHVGSVVLFCAMADAVLILA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLGMAQALGERPSLARFLGLAGAAFLLLYGVQALRRARHSNQLRAVAGGDGLSRRAALA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
QAAAFTLLNPHVYLDTVLLVGSIGAQQASALRGWFVAGAGSASLFWFVSLGFGARWLAPW
HHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCHHHHHHHHHCCCHHHHHHH
FARPKAWQVLDGLIGVTMLVLSALLLHHALRGF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTSIATSSSVFLQGLALSLGLIVAIGAQNAFVLRQGLRREHVGSVVLFCAMADAVLILA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLGMAQALGERPSLARFLGLAGAAFLLLYGVQALRRARHSNQLRAVAGGDGLSRRAALA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
QAAAFTLLNPHVYLDTVLLVGSIGAQQASALRGWFVAGAGSASLFWFVSLGFGARWLAPW
HHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCHHHHHHHHHCCCHHHHHHH
FARPKAWQVLDGLIGVTMLVLSALLLHHALRGF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]