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The map label for this gene is hpcD [H]

Identifier: 187929036

GI number: 187929036

Start: 2066703

End: 2067092

Strand: Reverse

Name: hpcD [H]

Synonym: Rpic_1956

Alternate gene names: 187929036

Gene position: 2067092-2066703 (Counterclockwise)

Preceding gene: 187929037

Following gene: 187929035

Centisome position: 52.43

GC content: 61.28

Gene sequence:

>390_bases
ATGCCGCATGTCATCGTCGAATACACCGACAACCTGGGCGATGACGCCCGCATCCCGCAATTGCTGCAGGCGATGAACGA
GACGCTGATGGCGCAGAACGGTGTGTTTCCGACCGGCGGGATCCGTTCGCGCGCCATCAAGCTGACCGACTACCGCGTGG
CCGACGGAAAAGAGGACGACGCCTTCGTCCATGTCACGCTCAAGATCGCAGCGGGCCGTACGCCCGAGGTCAAGAAAGCC
GCGTGCGACGCGCTGTTCGAGGCAGTCAAGGCACATTTTGCCGAGGCCTTTGCGCGCCGTTATCTGGCGCTGTCGATGGA
GTTGACCGAGTTTGACGAGGGCGGCAGCTACAAGCACAACAACATCCACGCGCGTTTTCGCAAGGCTTGA

Upstream 100 bases:

>100_bases
GAGATCGTCACCGAATATTTCGCCAGTTCCGGCACGGGCCAGATCAACGCGATCTTTCCGTTGCCCGGACGTGATCAAGT
TCAAGCCTGAGGAGATCGAC

Downstream 100 bases:

>100_bases
CGCATGCTCGACACCACGACCATCCAAACCATCGCGCGCCGCTTGCACCAGGCCGAGATCGATCGCAAGCAGATCCGCCA
GGTTTCGCTTGACCACCCCG

Product: 5-carboxymethyl-2-hydroxymuconate isomerase

Products: NA

Alternate protein names: 5-carboxymethyl-2-hydroxymuconic acid isomerase; CHM isomerase; CHMI [H]

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MPHVIVEYTDNLGDDARIPQLLQAMNETLMAQNGVFPTGGIRSRAIKLTDYRVADGKEDDAFVHVTLKIAAGRTPEVKKA
ACDALFEAVKAHFAEAFARRYLALSMELTEFDEGGSYKHNNIHARFRKA

Sequences:

>Translated_129_residues
MPHVIVEYTDNLGDDARIPQLLQAMNETLMAQNGVFPTGGIRSRAIKLTDYRVADGKEDDAFVHVTLKIAAGRTPEVKKA
ACDALFEAVKAHFAEAFARRYLALSMELTEFDEGGSYKHNNIHARFRKA
>Mature_128_residues
PHVIVEYTDNLGDDARIPQLLQAMNETLMAQNGVFPTGGIRSRAIKLTDYRVADGKEDDAFVHVTLKIAAGRTPEVKKAA
CDALFEAVKAHFAEAFARRYLALSMELTEFDEGGSYKHNNIHARFRKA

Specific function: Transforms 5-carboxymethyl-2-hydroxy-muconic acid (CHM) into 5-oxo-pent-3-ene-1,2,5-tricarboxylic acid (OPET) [H]

COG id: COG3232

COG function: function code E; 5-carboxymethyl-2-hydroxymuconate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004220
- InterPro:   IPR014347 [H]

Pfam domain/function: PF02962 CHMI [H]

EC number: =5.3.3.10 [H]

Molecular weight: Translated: 14367; Mature: 14235

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHVIVEYTDNLGDDARIPQLLQAMNETLMAQNGVFPTGGIRSRAIKLTDYRVADGKEDD
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCC
AFVHVTLKIAAGRTPEVKKAACDALFEAVKAHFAEAFARRYLALSMELTEFDEGGSYKHN
EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCC
NIHARFRKA
CEEEEEECC
>Mature Secondary Structure 
PHVIVEYTDNLGDDARIPQLLQAMNETLMAQNGVFPTGGIRSRAIKLTDYRVADGKEDD
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCC
AFVHVTLKIAAGRTPEVKKAACDALFEAVKAHFAEAFARRYLALSMELTEFDEGGSYKHN
EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCC
NIHARFRKA
CEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2194841; 2261999; 8547259 [H]