| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928989
Identifier: 187928989
GI number: 187928989
Start: 2013488
End: 2014231
Strand: Reverse
Name: 187928989
Synonym: Rpic_1909
Alternate gene names: NA
Gene position: 2014231-2013488 (Counterclockwise)
Preceding gene: 187928990
Following gene: 187928988
Centisome position: 51.09
GC content: 66.4
Gene sequence:
>744_bases TTGCGGCGGTGTTCGAGCGCATCTGAACGCATTTTCTCGATTGAACGCCTGATTCGGCCAACCGGCGCGTTGCTTGCGCT GGTGCTGGCCGCAGGCGTGGCGCCGGTGTCTGCCCAGACGCCGGCCGCCAACAACGGCTACGAGGTGTCGACCGGCAGCA CCAACGTGCAGCCAGGTGACCTGGGCCTGAACCGCGCCGTTGCCGATGGCGACAAGCGTCGCGCTCAGGCCAGGAGGGGC GACAACGGCTTCTCCGCACAGACCGCGTCGCCGCGTGTGTTGCAACCGCAGCCCGACTACGCGAAATACCCTGTCTACAC AGGCGCAATTGGCGACATGCCGATCCACATGCGCCTTGGCCGCAAGGCCGGTGAAATCGACAGCGTCCACGGCGAATACG TCGCGGGCAACGCGGCGGGCGTTCGCTTGGTGGCCGGCGAATACGAAAACGGCGGCTTCCTCATGGAGGAGTCCGATGAC GGTACGCACGTCACAGGCACCTGGGAAGGCGCCATCGACGGCCACGGCATTGTGCGCGGCACGTGGACGGACGTCGCCCA CGACGGTCATACGCTGCCGTTTGTGCTGCGGCCCGTCGCCGTGGTCGTGATTCCGCCGTACGATGCCGCAGCAAACAGCA ATGCGGCCTCGCCAGCCACGCCAATGACGCCGCTGGTCCCAGCGGGGCCTGGTCAGATTGCACCACCGGCCGGCAGTCCA ACACGATCAAGCGCGCACTGGTAA
Upstream 100 bases:
>100_bases GCAACGGGTGCGCTTATCACGGTCAAGGCGTTGCACGAGCTGCAGCGCATCGGTGGTCGCTACGCGCTGGTGACCATGTG TATTGGTGGAGGACAGGGCA
Downstream 100 bases:
>100_bases GCGGCCGCAAAACGCTCATACGCCATCAAACAGGAAACCACGTGAACGACGACACCAAGCTCCCGCCCATGTTTCCCGCG ACCCAGGCTGTGCATCCGGA
Product: putative signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MRRCSSASERIFSIERLIRPTGALLALVLAAGVAPVSAQTPAANNGYEVSTGSTNVQPGDLGLNRAVADGDKRRAQARRG DNGFSAQTASPRVLQPQPDYAKYPVYTGAIGDMPIHMRLGRKAGEIDSVHGEYVAGNAAGVRLVAGEYENGGFLMEESDD GTHVTGTWEGAIDGHGIVRGTWTDVAHDGHTLPFVLRPVAVVVIPPYDAAANSNAASPATPMTPLVPAGPGQIAPPAGSP TRSSAHW
Sequences:
>Translated_247_residues MRRCSSASERIFSIERLIRPTGALLALVLAAGVAPVSAQTPAANNGYEVSTGSTNVQPGDLGLNRAVADGDKRRAQARRG DNGFSAQTASPRVLQPQPDYAKYPVYTGAIGDMPIHMRLGRKAGEIDSVHGEYVAGNAAGVRLVAGEYENGGFLMEESDD GTHVTGTWEGAIDGHGIVRGTWTDVAHDGHTLPFVLRPVAVVVIPPYDAAANSNAASPATPMTPLVPAGPGQIAPPAGSP TRSSAHW >Mature_247_residues MRRCSSASERIFSIERLIRPTGALLALVLAAGVAPVSAQTPAANNGYEVSTGSTNVQPGDLGLNRAVADGDKRRAQARRG DNGFSAQTASPRVLQPQPDYAKYPVYTGAIGDMPIHMRLGRKAGEIDSVHGEYVAGNAAGVRLVAGEYENGGFLMEESDD GTHVTGTWEGAIDGHGIVRGTWTDVAHDGHTLPFVLRPVAVVVIPPYDAAANSNAASPATPMTPLVPAGPGQIAPPAGSP TRSSAHW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25667; Mature: 25667
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRCSSASERIFSIERLIRPTGALLALVLAAGVAPVSAQTPAANNGYEVSTGSTNVQPGD CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCC LGLNRAVADGDKRRAQARRGDNGFSAQTASPRVLQPQPDYAKYPVYTGAIGDMPIHMRLG CCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCEEEEEEC RKAGEIDSVHGEYVAGNAAGVRLVAGEYENGGFLMEESDDGTHVTGTWEGAIDGHGIVRG CCCCCCCCCCCCEEECCCCCEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCEEEEE TWTDVAHDGHTLPFVLRPVAVVVIPPYDAAANSNAASPATPMTPLVPAGPGQIAPPAGSP EHHHHCCCCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TRSSAHW CCCCCCC >Mature Secondary Structure MRRCSSASERIFSIERLIRPTGALLALVLAAGVAPVSAQTPAANNGYEVSTGSTNVQPGD CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCC LGLNRAVADGDKRRAQARRGDNGFSAQTASPRVLQPQPDYAKYPVYTGAIGDMPIHMRLG CCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCEEEEEEC RKAGEIDSVHGEYVAGNAAGVRLVAGEYENGGFLMEESDDGTHVTGTWEGAIDGHGIVRG CCCCCCCCCCCCEEECCCCCEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCEEEEE TWTDVAHDGHTLPFVLRPVAVVVIPPYDAAANSNAASPATPMTPLVPAGPGQIAPPAGSP EHHHHCCCCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TRSSAHW CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA