| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928872
Identifier: 187928872
GI number: 187928872
Start: 1884502
End: 1885158
Strand: Direct
Name: 187928872
Synonym: Rpic_1789
Alternate gene names: NA
Gene position: 1884502-1885158 (Clockwise)
Preceding gene: 187928871
Following gene: 187928873
Centisome position: 47.8
GC content: 64.84
Gene sequence:
>657_bases GTGAGGGTTTCGGACGAGATCCGGGGTGAACGCAAGGCAGCCGTGCTGAGCGCCATGCAGAAGCTGCGAGATGCATTCCC TTTGCAACAGGCCGTGGACGAGGCCAACCCCGTCCTGCGCACGACTTATGCCAAGGTGCTTTCGCACTGGGCTCTGCAGG GCACACCACCCCCGCGAGATCTCGCTTCCAACGCGGCAATACAGGAACTGGTCGCGCTGGATGCGCTGATCATTGATGAG TGCAGGATTGGCTGCTATCCGTTTAGCGCCCGCGATACGGGCATCCATGTCCACTTCTCTGGGCATCGCGTTGCGGCAAT GTGTGCGATCGACGCCCTGGCGATCCCCCGCCTGGTGCGACACACGTCGCGCGTCACGGCTCGGTGCGCCGTATGTCGTT GCCACCTTGAGTGCACGGTCGCGGCCAGCGGCAGCGTTGACGGAGGGAATCCGCAAGGCGTGCGTGTGGTCTGGCGTTCC AGCGCGGTCGCCGAGGGAGCCTGTTGCCACATCCCATGCCCCGGCATCCGATTCGTCTGCAGGCAGTGTGCCGAACTGCC CGGGGCGACGGGCCTCTCGCTTCCCGAAGCGGCCGCGGTGGGAAACGGTTTCTTCGCGTTCCAACGGCGATTGCTGCGCC ACCATGGGCAACGCTGA
Upstream 100 bases:
>100_bases CTGAACGAGCTGGCTTGCTGCGCCGACGAAGTTCGTGCCCCATCCTAGGCGGAGAGGCGTTGGCGATGATGACAACTGGA TTGACCATATGAGGTGACGC
Downstream 100 bases:
>100_bases CACCGGAAGAACGCTTTCCTCTGCGAACCGTGTTTCAAGTTCTACGTGCAGCAGGCGGTGAAATTGGGGGCGACCGAGCA TGAAGTGGGCGAGGTGCTTG
Product: alkylmercury lyase
Products: NA
Alternate protein names: Organomercurial Lyase
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MRVSDEIRGERKAAVLSAMQKLRDAFPLQQAVDEANPVLRTTYAKVLSHWALQGTPPPRDLASNAAIQELVALDALIIDE CRIGCYPFSARDTGIHVHFSGHRVAAMCAIDALAIPRLVRHTSRVTARCAVCRCHLECTVAASGSVDGGNPQGVRVVWRS SAVAEGACCHIPCPGIRFVCRQCAELPGATGLSLPEAAAVGNGFFAFQRRLLRHHGQR
Sequences:
>Translated_218_residues MRVSDEIRGERKAAVLSAMQKLRDAFPLQQAVDEANPVLRTTYAKVLSHWALQGTPPPRDLASNAAIQELVALDALIIDE CRIGCYPFSARDTGIHVHFSGHRVAAMCAIDALAIPRLVRHTSRVTARCAVCRCHLECTVAASGSVDGGNPQGVRVVWRS SAVAEGACCHIPCPGIRFVCRQCAELPGATGLSLPEAAAVGNGFFAFQRRLLRHHGQR >Mature_218_residues MRVSDEIRGERKAAVLSAMQKLRDAFPLQQAVDEANPVLRTTYAKVLSHWALQGTPPPRDLASNAAIQELVALDALIIDE CRIGCYPFSARDTGIHVHFSGHRVAAMCAIDALAIPRLVRHTSRVTARCAVCRCHLECTVAASGSVDGGNPQGVRVVWRS SAVAEGACCHIPCPGIRFVCRQCAELPGATGLSLPEAAAVGNGFFAFQRRLLRHHGQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23499; Mature: 23499
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSDEIRGERKAAVLSAMQKLRDAFPLQQAVDEANPVLRTTYAKVLSHWALQGTPPPRD CCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHH LASNAAIQELVALDALIIDECRIGCYPFSARDTGIHVHFSGHRVAAMCAIDALAIPRLVR HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHH HTSRVTARCAVCRCHLECTVAASGSVDGGNPQGVRVVWRSSAVAEGACCHIPCPGIRFVC HHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHH RQCAELPGATGLSLPEAAAVGNGFFAFQRRLLRHHGQR HHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MRVSDEIRGERKAAVLSAMQKLRDAFPLQQAVDEANPVLRTTYAKVLSHWALQGTPPPRD CCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHH LASNAAIQELVALDALIIDECRIGCYPFSARDTGIHVHFSGHRVAAMCAIDALAIPRLVR HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHH HTSRVTARCAVCRCHLECTVAASGSVDGGNPQGVRVVWRSSAVAEGACCHIPCPGIRFVC HHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHH RQCAELPGATGLSLPEAAAVGNGFFAFQRRLLRHHGQR HHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA