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The map label for this gene is copB [H]

Identifier: 187928803

GI number: 187928803

Start: 1814902

End: 1815876

Strand: Direct

Name: copB [H]

Synonym: Rpic_1720

Alternate gene names: 187928803

Gene position: 1814902-1815876 (Clockwise)

Preceding gene: 187928802

Following gene: 187928804

Centisome position: 46.03

GC content: 61.64

Gene sequence:

>975_bases
ATGCTCGACTTTCACAGCGGATTGATCATGCACAAGCACGTAAGAACACTGTTGACTGTGGCGCTGGCTGCCGCCGGCAT
CGGCGTTGCCTCGGCCCAGGAAATCCAACTGATGAACGGGGAGACAACCCCGGCGTCCCAATCTGGCGCTCAGAATACTG
GCAGCTCAATGCAGGGGATGGACCACGGCTCGATGCAAGGCATGGACCACGGCAGCATGAAGATGCAGGGTGGTTCGGCG
CCGCCCGACGCACGCGATCCCGATGCTTACTCGGGCGGATACCAGCTCGGCACCGGCAAATACGCACTGGGCGATCCCCG
CCACATGATGATGATGGCGGACGCGCACAACTTTGGCTCAGTGCTGGTTGACCGGCTGGAGTGGGTGCACGGTAACGATG
CCAATGCAACCGCCTACGAATTGCAAGCCCGGTTCGGCAGCGTGTACAACAAAGCGGTCCTAAAAGCCGAAGGCGATGTC
TCAAAGGGGCGCTTCGAAGAGGCGCGCACCGAGTTGCTGTGGAGCCATGCCGTCACAACGTTCTGGGATACCCAGCTCGG
TGTGCGGAATGACACGGGTTTCGGCCGACCCACACGCAACTGGGTGGCCTTCGGCGTGCAAGGTCTGGCTCCATACTGGT
TCGATGTCGAGGCCACCGCCTATGTGGGCAATAGTGGACGCACGGCATTGCGTCTGTCCAGCGAATACGAGCTGTTGCTG
ACCCAGCGGCTGATCCTGCAGCCGCGCATCGAAGCCAACTTCTATGGCAAGCGCGATCCCGATCTCGCCGTTGGCAGCGG
GCTTTCCAACGCGACGGTGGGCTTGCGGCTGCGCTATGAGTTCAGCCGCCAGTTTGCGCCCTATATCGGCGTCGAACGCA
GTCAGGCATTTGGCGGTACCGCCAACATGATCGAAGCGGCCGGTGGGCGCCGCGGCGACACCCGTTTTGTTGCGGGTGTG
CGCCTCTGGTTCTAG

Upstream 100 bases:

>100_bases
GCTTTCTCGTCACAGCGGACGCGCTGGGTCGCTGGGCCTGGCATTGCCACCTGATGTTGCACATGGATGCGGGTATGTTC
CGCGAAGTGGTGGTGGTCTG

Downstream 100 bases:

>100_bases
TTTTCTCAACTCCCAACCACAAGGGTGTTTCTATGTTCACGTCTCGTTTTGCCACCAAGGCCATCATTGGCACGTCCTTG
GCGCTTCTGGCTTCGGCCGC

Product: copper resistance B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MLDFHSGLIMHKHVRTLLTVALAAAGIGVASAQEIQLMNGETTPASQSGAQNTGSSMQGMDHGSMQGMDHGSMKMQGGSA
PPDARDPDAYSGGYQLGTGKYALGDPRHMMMMADAHNFGSVLVDRLEWVHGNDANATAYELQARFGSVYNKAVLKAEGDV
SKGRFEEARTELLWSHAVTTFWDTQLGVRNDTGFGRPTRNWVAFGVQGLAPYWFDVEATAYVGNSGRTALRLSSEYELLL
TQRLILQPRIEANFYGKRDPDLAVGSGLSNATVGLRLRYEFSRQFAPYIGVERSQAFGGTANMIEAAGGRRGDTRFVAGV
RLWF

Sequences:

>Translated_324_residues
MLDFHSGLIMHKHVRTLLTVALAAAGIGVASAQEIQLMNGETTPASQSGAQNTGSSMQGMDHGSMQGMDHGSMKMQGGSA
PPDARDPDAYSGGYQLGTGKYALGDPRHMMMMADAHNFGSVLVDRLEWVHGNDANATAYELQARFGSVYNKAVLKAEGDV
SKGRFEEARTELLWSHAVTTFWDTQLGVRNDTGFGRPTRNWVAFGVQGLAPYWFDVEATAYVGNSGRTALRLSSEYELLL
TQRLILQPRIEANFYGKRDPDLAVGSGLSNATVGLRLRYEFSRQFAPYIGVERSQAFGGTANMIEAAGGRRGDTRFVAGV
RLWF
>Mature_324_residues
MLDFHSGLIMHKHVRTLLTVALAAAGIGVASAQEIQLMNGETTPASQSGAQNTGSSMQGMDHGSMQGMDHGSMKMQGGSA
PPDARDPDAYSGGYQLGTGKYALGDPRHMMMMADAHNFGSVLVDRLEWVHGNDANATAYELQARFGSVYNKAVLKAEGDV
SKGRFEEARTELLWSHAVTTFWDTQLGVRNDTGFGRPTRNWVAFGVQGLAPYWFDVEATAYVGNSGRTALRLSSEYELLL
TQRLILQPRIEANFYGKRDPDLAVGSGLSNATVGLRLRYEFSRQFAPYIGVERSQAFGGTANMIEAAGGRRGDTRFVAGV
RLWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 35241; Mature: 35241

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDFHSGLIMHKHVRTLLTVALAAAGIGVASAQEIQLMNGETTPASQSGAQNTGSSMQGM
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
DHGSMQGMDHGSMKMQGGSAPPDARDPDAYSGGYQLGTGKYALGDPRHMMMMADAHNFGS
CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCEECCCCCEEEEEECCCCHHH
VLVDRLEWVHGNDANATAYELQARFGSVYNKAVLKAEGDVSKGRFEEARTELLWSHAVTT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHH
FWDTQLGVRNDTGFGRPTRNWVAFGVQGLAPYWFDVEATAYVGNSGRTALRLSSEYELLL
HCCCCCCCCCCCCCCCCCCHHHEECCCCCCCEEEEEEEEEEECCCCCEEEEECCCHHHHH
TQRLILQPRIEANFYGKRDPDLAVGSGLSNATVGLRLRYEFSRQFAPYIGVERSQAFGGT
HHHHHHCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
ANMIEAAGGRRGDTRFVAGVRLWF
HHHHHHCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MLDFHSGLIMHKHVRTLLTVALAAAGIGVASAQEIQLMNGETTPASQSGAQNTGSSMQGM
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
DHGSMQGMDHGSMKMQGGSAPPDARDPDAYSGGYQLGTGKYALGDPRHMMMMADAHNFGS
CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCEECCCCCEEEEEECCCCHHH
VLVDRLEWVHGNDANATAYELQARFGSVYNKAVLKAEGDVSKGRFEEARTELLWSHAVTT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHH
FWDTQLGVRNDTGFGRPTRNWVAFGVQGLAPYWFDVEATAYVGNSGRTALRLSSEYELLL
HCCCCCCCCCCCCCCCCCCHHHEECCCCCCCEEEEEEEEEEECCCCCEEEEECCCHHHHH
TQRLILQPRIEANFYGKRDPDLAVGSGLSNATVGLRLRYEFSRQFAPYIGVERSQAFGGT
HHHHHHCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
ANMIEAAGGRRGDTRFVAGVRLWF
HHHHHHCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]