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The map label for this gene is copC [H]

Identifier: 187928804

GI number: 187928804

Start: 1815909

End: 1816295

Strand: Direct

Name: copC [H]

Synonym: Rpic_1721

Alternate gene names: 187928804

Gene position: 1815909-1816295 (Clockwise)

Preceding gene: 187928803

Following gene: 187928805

Centisome position: 46.06

GC content: 60.47

Gene sequence:

>387_bases
ATGTTCACGTCTCGTTTTGCCACCAAGGCCATCATTGGCACGTCCTTGGCGCTTCTGGCTTCGGCCGCGTTCGCGCATCC
CAAACTGGTCTCTTCGACGCCCGCCGATCAGGCGGAAGTGACTGCGCCGACGAAGATCGAGCTGAAGTTCTCGGAGACCC
TCACGACACAATTCTCCGGGGCCAATCTCGTCATGACGGAGATGCCCGGCATGTCGGGGCATAACCCGATGAAGGTTGGC
GCAAAAGTCTCCGCCGGCGACGACGCCAAGACGATGGTCATCACGCCCGCACAACCGCTGACGACCGGGACGTACAAGGT
GGAGTGGCGCGCGGTCTCGTCGGATACCCACCCGATGACGGGGAATTTCACGTTCAAGGTGAAGTAA

Upstream 100 bases:

>100_bases
TGATCGAAGCGGCCGGTGGGCGCCGCGGCGACACCCGTTTTGTTGCGGGTGTGCGCCTCTGGTTCTAGTTTTCTCAACTC
CCAACCACAAGGGTGTTTCT

Downstream 100 bases:

>100_bases
GGCCATGGCGGATGATTGGCTCAATATCGCCCTGCGCTTTGGGCTGTACCTGGACTTGACGATCCTTTTCGGGGTCTCGC
TGTTCGGGGTCCAGGCGTTG

Product: copper resistance protein CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MFTSRFATKAIIGTSLALLASAAFAHPKLVSSTPADQAEVTAPTKIELKFSETLTTQFSGANLVMTEMPGMSGHNPMKVG
AKVSAGDDAKTMVITPAQPLTTGTYKVEWRAVSSDTHPMTGNFTFKVK

Sequences:

>Translated_128_residues
MFTSRFATKAIIGTSLALLASAAFAHPKLVSSTPADQAEVTAPTKIELKFSETLTTQFSGANLVMTEMPGMSGHNPMKVG
AKVSAGDDAKTMVITPAQPLTTGTYKVEWRAVSSDTHPMTGNFTFKVK
>Mature_128_residues
MFTSRFATKAIIGTSLALLASAAFAHPKLVSSTPADQAEVTAPTKIELKFSETLTTQFSGANLVMTEMPGMSGHNPMKVG
AKVSAGDDAKTMVITPAQPLTTGTYKVEWRAVSSDTHPMTGNFTFKVK

Specific function: Mediates copper resistance by sequestration of copper in the periplasm along with the copper-binding protein CopA [H]

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=125, Percent_Identity=39.2, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 13553; Mature: 13553

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTSRFATKAIIGTSLALLASAAFAHPKLVSSTPADQAEVTAPTKIELKFSETLTTQFSG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEEECCEEEEEECC
ANLVMTEMPGMSGHNPMKVGAKVSAGDDAKTMVITPAQPLTTGTYKVEWRAVSSDTHPMT
CEEEEEECCCCCCCCCEEECEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCC
GNFTFKVK
CCEEEEEC
>Mature Secondary Structure
MFTSRFATKAIIGTSLALLASAAFAHPKLVSSTPADQAEVTAPTKIELKFSETLTTQFSG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEEECCEEEEEECC
ANLVMTEMPGMSGHNPMKVGAKVSAGDDAKTMVITPAQPLTTGTYKVEWRAVSSDTHPMT
CEEEEEECCCCCCCCCEEECEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCC
GNFTFKVK
CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]