Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is 187928650

Identifier: 187928650

GI number: 187928650

Start: 1654645

End: 1655415

Strand: Reverse

Name: 187928650

Synonym: Rpic_1566

Alternate gene names: NA

Gene position: 1655415-1654645 (Counterclockwise)

Preceding gene: 187928651

Following gene: 187928649

Centisome position: 41.99

GC content: 63.55

Gene sequence:

>771_bases
ATGGCAGAGCAATTGATCGACGCAGCGCAAAGCACGCTGGCCAAGGCGCTGTCGGCACTGAGCCGTCGTGCCGACCGGGT
GCACTCACAGCTCTGTGCTGCGCAGCGTATTCGCACGGCCTATCTCGCCGCGCAGGTCGGCATATTGGTGCCGGCCGTCT
CTCGGTCGGTTGTTCGTTCGCTTCAGGTCAGGCTCCCCGCATTCATGACCTCCGACGTCATCGCGGAATTCCACCGCGGG
CGCAAATTCCTTGCGGTGTTTCCCCGCAAGCAAACCCGTGAGTCGCTGTCGATCCTCCAATACGCGCTTACGGCGTATCT
CAGTCAGATCCGCTACCAGGAATTGAAGGAATTCGACGCTGAAATTGCCCACCTGCGGGCCTACCTCACTGACTTGGAAC
GCGCACGTGAGCAAGCGTCAGACCTTCTGCGGGTGCTCCAGGTGGTGCAGGATCGCGCCGCACCGGTTCCCTCCGAAGCG
CAGCCGCTACTGGCTCGGATGGCTGGCGCTGGGGATCGACATTGCCGGCGCTCGAACGCCGGCACCGACGGTCGGCGCCG
CGCGGCCAGTGCATTGGATGATCAAGACACGAACCTATGCGCGTTCGTGTTGGCAGAACTTCCCTCTCGTTTGGGGGAGC
TTCTGACGCGCGACAAATCGGCGGCCTTCGACGCGTCGACCGAACGCCCTCGCGCTGGGCCGACCACTGGCTCGCCACGT
TTGCCTGTTCCGGCACTCGACACGCTTGACGCGCAACTCGCGACGGCATGA

Upstream 100 bases:

>100_bases
GCGCCGCTTCATGGTGACACGCGTGCCAGCGCTGGCCGCCGGCGACCTGCAGGTGGCCTGAACGACTGACTCCCGGGCGT
ACACGACATCGGAGGATGGA

Downstream 100 bases:

>100_bases
CCACCGAGCGGCTGGTGCCATCCCTTGACTTTGTACTGGGCTGGCTACGCTGATCTGAATCCATTGCCACCCGAGGCCAG
CCGCCTCGCACACAATTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MAEQLIDAAQSTLAKALSALSRRADRVHSQLCAAQRIRTAYLAAQVGILVPAVSRSVVRSLQVRLPAFMTSDVIAEFHRG
RKFLAVFPRKQTRESLSILQYALTAYLSQIRYQELKEFDAEIAHLRAYLTDLERAREQASDLLRVLQVVQDRAAPVPSEA
QPLLARMAGAGDRHCRRSNAGTDGRRRAASALDDQDTNLCAFVLAELPSRLGELLTRDKSAAFDASTERPRAGPTTGSPR
LPVPALDTLDAQLATA

Sequences:

>Translated_256_residues
MAEQLIDAAQSTLAKALSALSRRADRVHSQLCAAQRIRTAYLAAQVGILVPAVSRSVVRSLQVRLPAFMTSDVIAEFHRG
RKFLAVFPRKQTRESLSILQYALTAYLSQIRYQELKEFDAEIAHLRAYLTDLERAREQASDLLRVLQVVQDRAAPVPSEA
QPLLARMAGAGDRHCRRSNAGTDGRRRAASALDDQDTNLCAFVLAELPSRLGELLTRDKSAAFDASTERPRAGPTTGSPR
LPVPALDTLDAQLATA
>Mature_255_residues
AEQLIDAAQSTLAKALSALSRRADRVHSQLCAAQRIRTAYLAAQVGILVPAVSRSVVRSLQVRLPAFMTSDVIAEFHRGR
KFLAVFPRKQTRESLSILQYALTAYLSQIRYQELKEFDAEIAHLRAYLTDLERAREQASDLLRVLQVVQDRAAPVPSEAQ
PLLARMAGAGDRHCRRSNAGTDGRRRAASALDDQDTNLCAFVLAELPSRLGELLTRDKSAAFDASTERPRAGPTTGSPRL
PVPALDTLDAQLATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28043; Mature: 27912

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQLIDAAQSTLAKALSALSRRADRVHSQLCAAQRIRTAYLAAQVGILVPAVSRSVVRS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQVRLPAFMTSDVIAEFHRGRKFLAVFPRKQTRESLSILQYALTAYLSQIRYQELKEFDA
HHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAHLRAYLTDLERAREQASDLLRVLQVVQDRAAPVPSEAQPLLARMAGAGDRHCRRSNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCC
GTDGRRRAASALDDQDTNLCAFVLAELPSRLGELLTRDKSAAFDASTERPRAGPTTGSPR
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC
LPVPALDTLDAQLATA
CCCCCHHHHHHHHHCC
>Mature Secondary Structure 
AEQLIDAAQSTLAKALSALSRRADRVHSQLCAAQRIRTAYLAAQVGILVPAVSRSVVRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQVRLPAFMTSDVIAEFHRGRKFLAVFPRKQTRESLSILQYALTAYLSQIRYQELKEFDA
HHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAHLRAYLTDLERAREQASDLLRVLQVVQDRAAPVPSEAQPLLARMAGAGDRHCRRSNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCC
GTDGRRRAASALDDQDTNLCAFVLAELPSRLGELLTRDKSAAFDASTERPRAGPTTGSPR
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC
LPVPALDTLDAQLATA
CCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA