| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928602
Identifier: 187928602
GI number: 187928602
Start: 1609469
End: 1611325
Strand: Reverse
Name: 187928602
Synonym: Rpic_1518
Alternate gene names: NA
Gene position: 1611325-1609469 (Counterclockwise)
Preceding gene: 187928603
Following gene: 187928601
Centisome position: 40.87
GC content: 60.9
Gene sequence:
>1857_bases ATGAACTACGTGAGCCACTTTCGCCCGATCTTCGAGGCCCGCGCGGCCGTCGGTTGGCTGATCGGTTTGATCTTGCTCCC CCTGTCCGGCATGCCCCACGCATGGGCGTTCGCGGTCATTTGTGCTCTGTTCCTCGTGGCGCGCGCCTACCAGGTGCGCA AGGCGCTGGCCTTTCGCATGTCGATTTCGACGCGTTGGCTCACCCTCATTCAGATCGACGTGCTGCTGCGCACGAGTGCC CGCATGCGAGCCGACCTTGACGCGATGTACTTCGGTAACGGCTTCGAATGGACGCAGCGCCATTGCCAGATCGCGCACGA CATCTTGCGCATGCCGTCCACCGAAATTCCGGGTCTTCCGAAGTGGCTCCCGCCGAAAGTCGCCAAGCGAATCGAGACCG CGTTTGCGCCGCCCAACAGCGTCCCCGACACGGCCCCGCAGGGCAAGTCCTGGATCCACGGGATGGAACCCAACAAGATC GAAGTGCCCCTGCACTATAAGGCGCTCGGCGGTCACACGGCCGTGAGCGGCACCACGGGTGCCGGGAAAACCAAGACCTA CGAGCTGATTGCGACACAGGTCATTCACAGCCCCAACAAAGACGTCCTCATTATTGTCGACCCGAAGAACGACAAGGACT TCAAGAAGCGCGTCGAGCGTGAATGCAAGCGTGCCGGTCGCAAGTTCCTGTACTGGAAGCAGGCTGCGCCGTCCGAATCG ATTCGGATGAATCCGGTTGAGAATTGGTCGCAGCCGTCGGAAATCGCCAGCCGCGTCTCCCAACTGATGGAAGAAGGCCC TTTCCGCGACTTTGCCTTCCTCTTCATCGACCGCGCAGTCAAGGGTGAGCTGTACGTCGGCGACAAGCCGAACCTCCGCT CGATCCTGAATTACGCACAGTCCGGCATCAATGGTCTGCTCGATCGATGCCTGCGCCGATTCTTTCCGGAAGCGGGCATG CTCGACTGGGAAGACGAGGCCAGAGGCTTTCTGCAGCGCATCGCCCAGAAGGGCGGGGTGGATCCTCTGCAGGGGATGGT TCAGCTCTACGTCGACAACTTCGCAAAGAAGGGCCTCGGCCACGAGACGATCGACGGCCTGGTGGCCACCTTCGTGCACG ATCGCGAGCACTACATGCGGATCATCGCCTCGGCGCTGCCGCTGCTGCAGATGCTGGCTACCGGCGAAACCGGTCTCATG CTCGCGCCGAAGGCCGACGATTTCACGGATGACCGTGAGATCTGGGATATCGAGCGCGTGATCAAGCAGAAGGCCGTCCT GTACGTTGGCCTGGATTCGATGTCCAACAGCATCGTCGCCAAGGCGATCGCTTCCATGCTGCTGGCCGACGTGGCTTCTG TCGCGGGCGCCATCTACAACTTCTACGAGACGCCACCCGACATCGTCTTGCTGGTCGATGAGGTGGCCGAAGCCATCAAC GAGCAGGTGATCCAGATTCTCAACAAAGGCCGTGGCGCCGGCTTCCGGTCGTTCGTGGCGTTCCAAAGCCGCTCCGACCT GGAAGCCAAGCTTGGCAGTGCTGCAAAGATGCTGCAGGTGCTCGGCAACCTGAACAACCAGATCATCCTGCGCCTTGAGG ATACCGACACCGCGCAATGGTTCTCCGACAAGGTGGGCGAGACAGCCATTCGCAACATCGTGGTGTCGAGCAGCGCAAGC ACAGGTTCCGAGTCGCACGTCGGGGAATTCAGCGGCTCCGTATCTCGCTCGACGCAGTTGGAGAAGGCGCCGCTGATTCC GCCACGCCTCATCACCGAACTGCCGAACCTCCAGTACTTCATGCGCATCTCCGGTGGCTCGGTCTACCAAGGTCGCATTC CCATCATCCAAGGATAA
Upstream 100 bases:
>100_bases TGGACAACCTGCGCAAGCTCAACCTCCTCGCCAGCTCGCAGGGCGCTGACATCGTGCTGGTCGAGCGCATTGGCTCGCTG ATCCTCGCCCGTCCGCAGCA
Downstream 100 bases:
>100_bases CTGCAGCATGCCCAGTCTGTTTCGACAAGTCGTGAACCAGTACAAGCTTTCGTCGAAGCTCGCGCCCGTCTTCATCGCCT TCCCGGAGCTGGATGACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MNYVSHFRPIFEARAAVGWLIGLILLPLSGMPHAWAFAVICALFLVARAYQVRKALAFRMSISTRWLTLIQIDVLLRTSA RMRADLDAMYFGNGFEWTQRHCQIAHDILRMPSTEIPGLPKWLPPKVAKRIETAFAPPNSVPDTAPQGKSWIHGMEPNKI EVPLHYKALGGHTAVSGTTGAGKTKTYELIATQVIHSPNKDVLIIVDPKNDKDFKKRVERECKRAGRKFLYWKQAAPSES IRMNPVENWSQPSEIASRVSQLMEEGPFRDFAFLFIDRAVKGELYVGDKPNLRSILNYAQSGINGLLDRCLRRFFPEAGM LDWEDEARGFLQRIAQKGGVDPLQGMVQLYVDNFAKKGLGHETIDGLVATFVHDREHYMRIIASALPLLQMLATGETGLM LAPKADDFTDDREIWDIERVIKQKAVLYVGLDSMSNSIVAKAIASMLLADVASVAGAIYNFYETPPDIVLLVDEVAEAIN EQVIQILNKGRGAGFRSFVAFQSRSDLEAKLGSAAKMLQVLGNLNNQIILRLEDTDTAQWFSDKVGETAIRNIVVSSSAS TGSESHVGEFSGSVSRSTQLEKAPLIPPRLITELPNLQYFMRISGGSVYQGRIPIIQG
Sequences:
>Translated_618_residues MNYVSHFRPIFEARAAVGWLIGLILLPLSGMPHAWAFAVICALFLVARAYQVRKALAFRMSISTRWLTLIQIDVLLRTSA RMRADLDAMYFGNGFEWTQRHCQIAHDILRMPSTEIPGLPKWLPPKVAKRIETAFAPPNSVPDTAPQGKSWIHGMEPNKI EVPLHYKALGGHTAVSGTTGAGKTKTYELIATQVIHSPNKDVLIIVDPKNDKDFKKRVERECKRAGRKFLYWKQAAPSES IRMNPVENWSQPSEIASRVSQLMEEGPFRDFAFLFIDRAVKGELYVGDKPNLRSILNYAQSGINGLLDRCLRRFFPEAGM LDWEDEARGFLQRIAQKGGVDPLQGMVQLYVDNFAKKGLGHETIDGLVATFVHDREHYMRIIASALPLLQMLATGETGLM LAPKADDFTDDREIWDIERVIKQKAVLYVGLDSMSNSIVAKAIASMLLADVASVAGAIYNFYETPPDIVLLVDEVAEAIN EQVIQILNKGRGAGFRSFVAFQSRSDLEAKLGSAAKMLQVLGNLNNQIILRLEDTDTAQWFSDKVGETAIRNIVVSSSAS TGSESHVGEFSGSVSRSTQLEKAPLIPPRLITELPNLQYFMRISGGSVYQGRIPIIQG >Mature_618_residues MNYVSHFRPIFEARAAVGWLIGLILLPLSGMPHAWAFAVICALFLVARAYQVRKALAFRMSISTRWLTLIQIDVLLRTSA RMRADLDAMYFGNGFEWTQRHCQIAHDILRMPSTEIPGLPKWLPPKVAKRIETAFAPPNSVPDTAPQGKSWIHGMEPNKI EVPLHYKALGGHTAVSGTTGAGKTKTYELIATQVIHSPNKDVLIIVDPKNDKDFKKRVERECKRAGRKFLYWKQAAPSES IRMNPVENWSQPSEIASRVSQLMEEGPFRDFAFLFIDRAVKGELYVGDKPNLRSILNYAQSGINGLLDRCLRRFFPEAGM LDWEDEARGFLQRIAQKGGVDPLQGMVQLYVDNFAKKGLGHETIDGLVATFVHDREHYMRIIASALPLLQMLATGETGLM LAPKADDFTDDREIWDIERVIKQKAVLYVGLDSMSNSIVAKAIASMLLADVASVAGAIYNFYETPPDIVLLVDEVAEAIN EQVIQILNKGRGAGFRSFVAFQSRSDLEAKLGSAAKMLQVLGNLNNQIILRLEDTDTAQWFSDKVGETAIRNIVVSSSAS TGSESHVGEFSGSVSRSTQLEKAPLIPPRLITELPNLQYFMRISGGSVYQGRIPIIQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68742; Mature: 68742
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYVSHFRPIFEARAAVGWLIGLILLPLSGMPHAWAFAVICALFLVARAYQVRKALAFRM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISTRWLTLIQIDVLLRTSARMRADLDAMYFGNGFEWTQRHCQIAHDILRMPSTEIPGLP HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC KWLPPKVAKRIETAFAPPNSVPDTAPQGKSWIHGMEPNKIEVPLHYKALGGHTAVSGTTG CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCC AGKTKTYELIATQVIHSPNKDVLIIVDPKNDKDFKKRVERECKRAGRKFLYWKQAAPSES CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC IRMNPVENWSQPSEIASRVSQLMEEGPFRDFAFLFIDRAVKGELYVGDKPNLRSILNYAQ EECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHH SGINGLLDRCLRRFFPEAGMLDWEDEARGFLQRIAQKGGVDPLQGMVQLYVDNFAKKGLG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC HETIDGLVATFVHDREHYMRIIASALPLLQMLATGETGLMLAPKADDFTDDREIWDIERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHH IKQKAVLYVGLDSMSNSIVAKAIASMLLADVASVAGAIYNFYETPPDIVLLVDEVAEAIN HHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH EQVIQILNKGRGAGFRSFVAFQSRSDLEAKLGSAAKMLQVLGNLNNQIILRLEDTDTAQW HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH FSDKVGETAIRNIVVSSSASTGSESHVGEFSGSVSRSTQLEKAPLIPPRLITELPNLQYF HHHHHHHHHHHHHHEECCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCHHHHHHCCCCEEE MRISGGSVYQGRIPIIQG EEECCCCEEECCCCCCCC >Mature Secondary Structure MNYVSHFRPIFEARAAVGWLIGLILLPLSGMPHAWAFAVICALFLVARAYQVRKALAFRM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISTRWLTLIQIDVLLRTSARMRADLDAMYFGNGFEWTQRHCQIAHDILRMPSTEIPGLP HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC KWLPPKVAKRIETAFAPPNSVPDTAPQGKSWIHGMEPNKIEVPLHYKALGGHTAVSGTTG CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCC AGKTKTYELIATQVIHSPNKDVLIIVDPKNDKDFKKRVERECKRAGRKFLYWKQAAPSES CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC IRMNPVENWSQPSEIASRVSQLMEEGPFRDFAFLFIDRAVKGELYVGDKPNLRSILNYAQ EECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHH SGINGLLDRCLRRFFPEAGMLDWEDEARGFLQRIAQKGGVDPLQGMVQLYVDNFAKKGLG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC HETIDGLVATFVHDREHYMRIIASALPLLQMLATGETGLMLAPKADDFTDDREIWDIERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHH IKQKAVLYVGLDSMSNSIVAKAIASMLLADVASVAGAIYNFYETPPDIVLLVDEVAEAIN HHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH EQVIQILNKGRGAGFRSFVAFQSRSDLEAKLGSAAKMLQVLGNLNNQIILRLEDTDTAQW HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH FSDKVGETAIRNIVVSSSASTGSESHVGEFSGSVSRSTQLEKAPLIPPRLITELPNLQYF HHHHHHHHHHHHHHEECCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCHHHHHHCCCCEEE MRISGGSVYQGRIPIIQG EEECCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA