Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

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The map label for this gene is 187928602

Identifier: 187928602

GI number: 187928602

Start: 1609469

End: 1611325

Strand: Reverse

Name: 187928602

Synonym: Rpic_1518

Alternate gene names: NA

Gene position: 1611325-1609469 (Counterclockwise)

Preceding gene: 187928603

Following gene: 187928601

Centisome position: 40.87

GC content: 60.9

Gene sequence:

>1857_bases
ATGAACTACGTGAGCCACTTTCGCCCGATCTTCGAGGCCCGCGCGGCCGTCGGTTGGCTGATCGGTTTGATCTTGCTCCC
CCTGTCCGGCATGCCCCACGCATGGGCGTTCGCGGTCATTTGTGCTCTGTTCCTCGTGGCGCGCGCCTACCAGGTGCGCA
AGGCGCTGGCCTTTCGCATGTCGATTTCGACGCGTTGGCTCACCCTCATTCAGATCGACGTGCTGCTGCGCACGAGTGCC
CGCATGCGAGCCGACCTTGACGCGATGTACTTCGGTAACGGCTTCGAATGGACGCAGCGCCATTGCCAGATCGCGCACGA
CATCTTGCGCATGCCGTCCACCGAAATTCCGGGTCTTCCGAAGTGGCTCCCGCCGAAAGTCGCCAAGCGAATCGAGACCG
CGTTTGCGCCGCCCAACAGCGTCCCCGACACGGCCCCGCAGGGCAAGTCCTGGATCCACGGGATGGAACCCAACAAGATC
GAAGTGCCCCTGCACTATAAGGCGCTCGGCGGTCACACGGCCGTGAGCGGCACCACGGGTGCCGGGAAAACCAAGACCTA
CGAGCTGATTGCGACACAGGTCATTCACAGCCCCAACAAAGACGTCCTCATTATTGTCGACCCGAAGAACGACAAGGACT
TCAAGAAGCGCGTCGAGCGTGAATGCAAGCGTGCCGGTCGCAAGTTCCTGTACTGGAAGCAGGCTGCGCCGTCCGAATCG
ATTCGGATGAATCCGGTTGAGAATTGGTCGCAGCCGTCGGAAATCGCCAGCCGCGTCTCCCAACTGATGGAAGAAGGCCC
TTTCCGCGACTTTGCCTTCCTCTTCATCGACCGCGCAGTCAAGGGTGAGCTGTACGTCGGCGACAAGCCGAACCTCCGCT
CGATCCTGAATTACGCACAGTCCGGCATCAATGGTCTGCTCGATCGATGCCTGCGCCGATTCTTTCCGGAAGCGGGCATG
CTCGACTGGGAAGACGAGGCCAGAGGCTTTCTGCAGCGCATCGCCCAGAAGGGCGGGGTGGATCCTCTGCAGGGGATGGT
TCAGCTCTACGTCGACAACTTCGCAAAGAAGGGCCTCGGCCACGAGACGATCGACGGCCTGGTGGCCACCTTCGTGCACG
ATCGCGAGCACTACATGCGGATCATCGCCTCGGCGCTGCCGCTGCTGCAGATGCTGGCTACCGGCGAAACCGGTCTCATG
CTCGCGCCGAAGGCCGACGATTTCACGGATGACCGTGAGATCTGGGATATCGAGCGCGTGATCAAGCAGAAGGCCGTCCT
GTACGTTGGCCTGGATTCGATGTCCAACAGCATCGTCGCCAAGGCGATCGCTTCCATGCTGCTGGCCGACGTGGCTTCTG
TCGCGGGCGCCATCTACAACTTCTACGAGACGCCACCCGACATCGTCTTGCTGGTCGATGAGGTGGCCGAAGCCATCAAC
GAGCAGGTGATCCAGATTCTCAACAAAGGCCGTGGCGCCGGCTTCCGGTCGTTCGTGGCGTTCCAAAGCCGCTCCGACCT
GGAAGCCAAGCTTGGCAGTGCTGCAAAGATGCTGCAGGTGCTCGGCAACCTGAACAACCAGATCATCCTGCGCCTTGAGG
ATACCGACACCGCGCAATGGTTCTCCGACAAGGTGGGCGAGACAGCCATTCGCAACATCGTGGTGTCGAGCAGCGCAAGC
ACAGGTTCCGAGTCGCACGTCGGGGAATTCAGCGGCTCCGTATCTCGCTCGACGCAGTTGGAGAAGGCGCCGCTGATTCC
GCCACGCCTCATCACCGAACTGCCGAACCTCCAGTACTTCATGCGCATCTCCGGTGGCTCGGTCTACCAAGGTCGCATTC
CCATCATCCAAGGATAA

Upstream 100 bases:

>100_bases
TGGACAACCTGCGCAAGCTCAACCTCCTCGCCAGCTCGCAGGGCGCTGACATCGTGCTGGTCGAGCGCATTGGCTCGCTG
ATCCTCGCCCGTCCGCAGCA

Downstream 100 bases:

>100_bases
CTGCAGCATGCCCAGTCTGTTTCGACAAGTCGTGAACCAGTACAAGCTTTCGTCGAAGCTCGCGCCCGTCTTCATCGCCT
TCCCGGAGCTGGATGACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MNYVSHFRPIFEARAAVGWLIGLILLPLSGMPHAWAFAVICALFLVARAYQVRKALAFRMSISTRWLTLIQIDVLLRTSA
RMRADLDAMYFGNGFEWTQRHCQIAHDILRMPSTEIPGLPKWLPPKVAKRIETAFAPPNSVPDTAPQGKSWIHGMEPNKI
EVPLHYKALGGHTAVSGTTGAGKTKTYELIATQVIHSPNKDVLIIVDPKNDKDFKKRVERECKRAGRKFLYWKQAAPSES
IRMNPVENWSQPSEIASRVSQLMEEGPFRDFAFLFIDRAVKGELYVGDKPNLRSILNYAQSGINGLLDRCLRRFFPEAGM
LDWEDEARGFLQRIAQKGGVDPLQGMVQLYVDNFAKKGLGHETIDGLVATFVHDREHYMRIIASALPLLQMLATGETGLM
LAPKADDFTDDREIWDIERVIKQKAVLYVGLDSMSNSIVAKAIASMLLADVASVAGAIYNFYETPPDIVLLVDEVAEAIN
EQVIQILNKGRGAGFRSFVAFQSRSDLEAKLGSAAKMLQVLGNLNNQIILRLEDTDTAQWFSDKVGETAIRNIVVSSSAS
TGSESHVGEFSGSVSRSTQLEKAPLIPPRLITELPNLQYFMRISGGSVYQGRIPIIQG

Sequences:

>Translated_618_residues
MNYVSHFRPIFEARAAVGWLIGLILLPLSGMPHAWAFAVICALFLVARAYQVRKALAFRMSISTRWLTLIQIDVLLRTSA
RMRADLDAMYFGNGFEWTQRHCQIAHDILRMPSTEIPGLPKWLPPKVAKRIETAFAPPNSVPDTAPQGKSWIHGMEPNKI
EVPLHYKALGGHTAVSGTTGAGKTKTYELIATQVIHSPNKDVLIIVDPKNDKDFKKRVERECKRAGRKFLYWKQAAPSES
IRMNPVENWSQPSEIASRVSQLMEEGPFRDFAFLFIDRAVKGELYVGDKPNLRSILNYAQSGINGLLDRCLRRFFPEAGM
LDWEDEARGFLQRIAQKGGVDPLQGMVQLYVDNFAKKGLGHETIDGLVATFVHDREHYMRIIASALPLLQMLATGETGLM
LAPKADDFTDDREIWDIERVIKQKAVLYVGLDSMSNSIVAKAIASMLLADVASVAGAIYNFYETPPDIVLLVDEVAEAIN
EQVIQILNKGRGAGFRSFVAFQSRSDLEAKLGSAAKMLQVLGNLNNQIILRLEDTDTAQWFSDKVGETAIRNIVVSSSAS
TGSESHVGEFSGSVSRSTQLEKAPLIPPRLITELPNLQYFMRISGGSVYQGRIPIIQG
>Mature_618_residues
MNYVSHFRPIFEARAAVGWLIGLILLPLSGMPHAWAFAVICALFLVARAYQVRKALAFRMSISTRWLTLIQIDVLLRTSA
RMRADLDAMYFGNGFEWTQRHCQIAHDILRMPSTEIPGLPKWLPPKVAKRIETAFAPPNSVPDTAPQGKSWIHGMEPNKI
EVPLHYKALGGHTAVSGTTGAGKTKTYELIATQVIHSPNKDVLIIVDPKNDKDFKKRVERECKRAGRKFLYWKQAAPSES
IRMNPVENWSQPSEIASRVSQLMEEGPFRDFAFLFIDRAVKGELYVGDKPNLRSILNYAQSGINGLLDRCLRRFFPEAGM
LDWEDEARGFLQRIAQKGGVDPLQGMVQLYVDNFAKKGLGHETIDGLVATFVHDREHYMRIIASALPLLQMLATGETGLM
LAPKADDFTDDREIWDIERVIKQKAVLYVGLDSMSNSIVAKAIASMLLADVASVAGAIYNFYETPPDIVLLVDEVAEAIN
EQVIQILNKGRGAGFRSFVAFQSRSDLEAKLGSAAKMLQVLGNLNNQIILRLEDTDTAQWFSDKVGETAIRNIVVSSSAS
TGSESHVGEFSGSVSRSTQLEKAPLIPPRLITELPNLQYFMRISGGSVYQGRIPIIQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68742; Mature: 68742

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYVSHFRPIFEARAAVGWLIGLILLPLSGMPHAWAFAVICALFLVARAYQVRKALAFRM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SISTRWLTLIQIDVLLRTSARMRADLDAMYFGNGFEWTQRHCQIAHDILRMPSTEIPGLP
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
KWLPPKVAKRIETAFAPPNSVPDTAPQGKSWIHGMEPNKIEVPLHYKALGGHTAVSGTTG
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCC
AGKTKTYELIATQVIHSPNKDVLIIVDPKNDKDFKKRVERECKRAGRKFLYWKQAAPSES
CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC
IRMNPVENWSQPSEIASRVSQLMEEGPFRDFAFLFIDRAVKGELYVGDKPNLRSILNYAQ
EECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHH
SGINGLLDRCLRRFFPEAGMLDWEDEARGFLQRIAQKGGVDPLQGMVQLYVDNFAKKGLG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
HETIDGLVATFVHDREHYMRIIASALPLLQMLATGETGLMLAPKADDFTDDREIWDIERV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHH
IKQKAVLYVGLDSMSNSIVAKAIASMLLADVASVAGAIYNFYETPPDIVLLVDEVAEAIN
HHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
EQVIQILNKGRGAGFRSFVAFQSRSDLEAKLGSAAKMLQVLGNLNNQIILRLEDTDTAQW
HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH
FSDKVGETAIRNIVVSSSASTGSESHVGEFSGSVSRSTQLEKAPLIPPRLITELPNLQYF
HHHHHHHHHHHHHHEECCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCHHHHHHCCCCEEE
MRISGGSVYQGRIPIIQG
EEECCCCEEECCCCCCCC
>Mature Secondary Structure
MNYVSHFRPIFEARAAVGWLIGLILLPLSGMPHAWAFAVICALFLVARAYQVRKALAFRM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SISTRWLTLIQIDVLLRTSARMRADLDAMYFGNGFEWTQRHCQIAHDILRMPSTEIPGLP
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
KWLPPKVAKRIETAFAPPNSVPDTAPQGKSWIHGMEPNKIEVPLHYKALGGHTAVSGTTG
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCC
AGKTKTYELIATQVIHSPNKDVLIIVDPKNDKDFKKRVERECKRAGRKFLYWKQAAPSES
CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC
IRMNPVENWSQPSEIASRVSQLMEEGPFRDFAFLFIDRAVKGELYVGDKPNLRSILNYAQ
EECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHH
SGINGLLDRCLRRFFPEAGMLDWEDEARGFLQRIAQKGGVDPLQGMVQLYVDNFAKKGLG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
HETIDGLVATFVHDREHYMRIIASALPLLQMLATGETGLMLAPKADDFTDDREIWDIERV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHH
IKQKAVLYVGLDSMSNSIVAKAIASMLLADVASVAGAIYNFYETPPDIVLLVDEVAEAIN
HHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
EQVIQILNKGRGAGFRSFVAFQSRSDLEAKLGSAAKMLQVLGNLNNQIILRLEDTDTAQW
HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH
FSDKVGETAIRNIVVSSSASTGSESHVGEFSGSVSRSTQLEKAPLIPPRLITELPNLQYF
HHHHHHHHHHHHHHEECCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCHHHHHHCCCCEEE
MRISGGSVYQGRIPIIQG
EEECCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA