| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928601
Identifier: 187928601
GI number: 187928601
Start: 1608955
End: 1609461
Strand: Reverse
Name: 187928601
Synonym: Rpic_1517
Alternate gene names: NA
Gene position: 1609461-1608955 (Counterclockwise)
Preceding gene: 187928602
Following gene: 187928600
Centisome position: 40.82
GC content: 60.75
Gene sequence:
>507_bases ATGCCCAGTCTGTTTCGACAAGTCGTGAACCAGTACAAGCTTTCGTCGAAGCTCGCGCCCGTCTTCATCGCCTTCCCGGA GCTGGATGACTCCTGCAAGCGCGTCGTCGATTTTCTCGGCGTCAATTTTCGCGTGCGCGAAGAACCCCTCGTGGCCGAGA TGCTGATGGATGCGTTGTCGGCTTACCGCCAGGCGCGCAAGGAGGGCGACGCGAATATTGCTTTCGTGCGCGGCCTCTTC ACCCGCTCGCACGAGATCTTTTCCATGCGCTACGCCGCGTTCAAGGGCGAGAAGTACCACGTCTGGGCACCACTGCAGGA ACCCATCCCGGACTTCGAGGCACGCCAAAGCGCCGGCTACCAGTGCCGCATGGTCGATGAGCCCTGCCCTGACGACGTGA CGCCGCGCAGCGCTGCCATGCAAATGGCTGCGCGGGTGCTCAGTGGGCACGTCTTCTGCCGCTATTTCGAGGAATACGAT GTCGCTGAAGAATTCGCTCATCGCTAA
Upstream 100 bases:
>100_bases CGCCTCATCACCGAACTGCCGAACCTCCAGTACTTCATGCGCATCTCCGGTGGCTCGGTCTACCAAGGTCGCATTCCCAT CATCCAAGGATAACTGCAGC
Downstream 100 bases:
>100_bases GGTGTCCCGGCTCGATCTCGATACGGTCGGCCGTATCGAACTCGCCGCCCGAGGCTACCTGCAGGAACTGGCCGAGATTC CGCCCGAGTACGCCCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPSLFRQVVNQYKLSSKLAPVFIAFPELDDSCKRVVDFLGVNFRVREEPLVAEMLMDALSAYRQARKEGDANIAFVRGLF TRSHEIFSMRYAAFKGEKYHVWAPLQEPIPDFEARQSAGYQCRMVDEPCPDDVTPRSAAMQMAARVLSGHVFCRYFEEYD VAEEFAHR
Sequences:
>Translated_168_residues MPSLFRQVVNQYKLSSKLAPVFIAFPELDDSCKRVVDFLGVNFRVREEPLVAEMLMDALSAYRQARKEGDANIAFVRGLF TRSHEIFSMRYAAFKGEKYHVWAPLQEPIPDFEARQSAGYQCRMVDEPCPDDVTPRSAAMQMAARVLSGHVFCRYFEEYD VAEEFAHR >Mature_167_residues PSLFRQVVNQYKLSSKLAPVFIAFPELDDSCKRVVDFLGVNFRVREEPLVAEMLMDALSAYRQARKEGDANIAFVRGLFT RSHEIFSMRYAAFKGEKYHVWAPLQEPIPDFEARQSAGYQCRMVDEPCPDDVTPRSAAMQMAARVLSGHVFCRYFEEYDV AEEFAHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19370; Mature: 19239
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLFRQVVNQYKLSSKLAPVFIAFPELDDSCKRVVDFLGVNFRVREEPLVAEMLMDALS CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHH AYRQARKEGDANIAFVRGLFTRSHEIFSMRYAAFKGEKYHVWAPLQEPIPDFEARQSAGY HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCC QCRMVDEPCPDDVTPRSAAMQMAARVLSGHVFCRYFEEYDVAEEFAHR EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSLFRQVVNQYKLSSKLAPVFIAFPELDDSCKRVVDFLGVNFRVREEPLVAEMLMDALS CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHH AYRQARKEGDANIAFVRGLFTRSHEIFSMRYAAFKGEKYHVWAPLQEPIPDFEARQSAGY HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCC QCRMVDEPCPDDVTPRSAAMQMAARVLSGHVFCRYFEEYDVAEEFAHR EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA