| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928603
Identifier: 187928603
GI number: 187928603
Start: 1611322
End: 1612584
Strand: Reverse
Name: 187928603
Synonym: Rpic_1519
Alternate gene names: NA
Gene position: 1612584-1611322 (Counterclockwise)
Preceding gene: 187928604
Following gene: 187928602
Centisome position: 40.9
GC content: 64.61
Gene sequence:
>1263_bases ATGAACCACACGCCAATGCCCATCGCTGCATTGACCGCCACGCTCGGTTCGCGGCTGGACCTCGTTCGGCAGTACGCGAA CGAGTCGTCGAGCGCGGATTTCGAGCGCAAGTGGTTGTCCGTGCTCGAAACCTGCGCCGACTGGTATTCGTCGATGCCGC TGCGCCCCGAACAGCATCCGGAACCCGGTGGCGCGTTTCGCGCCACGGTCGAGACCGTCTACTACGCCCTGCGGCTATCC GGGGGACAGAAGTTCGGCGCCGACCAGCCCTCGGAGCGTCGGCGCAAGCTCGAACCACAATACCTGTATGCCGTGTTCCT CGCGGCGTGCTGCACCTGGCTGGACGAACCGTTCCGCCATTTCCAGTTCTACCGACTGAGAGACCAGGCCGAGTGGAGCC CTGCCGCGCATGGCGCCTTCTCGGCTTGGCTGGAAGGTGGCGAATACCGTGTGCAACGCCGAGAGGCGCCATTGCCCATC GAGCGGATGCGTACCGCCCTGCTCGCACGTTCCATCCTCGGCAACACTCGGCTGGAGCTGCTCGAGAGCATGGTGCAAAC CGACCTCTTCGGTGCGATCAATCCGGAGAGCCGCCCGGCCGGTACCGAGTCGCTGCTGCACAAGGTCCTGCGTCAAGCCG TGGCGGTGACCTGCGACACCGAGGACAAAGCACGGCGCGCGCGCTTTGCCCCCGATACCACGCCGATTCCTCCCGCGAAG ACGTTGGAGGACGGATTTGCCGCTCACGCTCAACCGGCCCCGGCGGCCGAGAAACGTCCATCGCAGCCCAAAGCCAAGGC GGCAAAGAGCGAGCCGTCGGCAGCGGATAGCGTCTCGGCGCTGTTCGAGCAGGCCAAGGCCACGCCGACGTCAACCGCTT CAGCTTCGCCTGAGACGCCAGCGCCGACATCGGAGAAGCCCAACACCCAAAGCTCACTGTTCGACTTGGACTCGATGCAG GTGCCCAAAGAGCCAACGGTCAAACAGGAAGACCCGTTTGCCGAAATCCTGAGTTCTGCGAGCACGCTCATGCGCGAGTT CTTCCGCGCACTCGTGCAGGACGTCGAGTCGGGCAAGGTGGCCGTGCACTGGGCCGAAAAGGGGCTGGTGCTGCAAAAGC GGATTCTCGGCAGCTACGGCATCGCCAGCGAAACGCTGGTGGACAACCTGCGCAAGCTCAACCTCCTCGCCAGCTCGCAG GGCGCTGACATCGTGCTGGTCGAGCGCATTGGCTCGCTGATCCTCGCCCGTCCGCAGCAATGA
Upstream 100 bases:
>100_bases GGCAAGCTGTTTGGCAATGGTGCCGGCATCAGCGGCGGGGCCGTAAAGGGCGGCATCAAGGCGGCGTGGGGCCTTGGCAA GCGCATGGCGGGCTGACGAT
Downstream 100 bases:
>100_bases ACTACGTGAGCCACTTTCGCCCGATCTTCGAGGCCCGCGCGGCCGTCGGTTGGCTGATCGGTTTGATCTTGCTCCCCCTG TCCGGCATGCCCCACGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MNHTPMPIAALTATLGSRLDLVRQYANESSSADFERKWLSVLETCADWYSSMPLRPEQHPEPGGAFRATVETVYYALRLS GGQKFGADQPSERRRKLEPQYLYAVFLAACCTWLDEPFRHFQFYRLRDQAEWSPAAHGAFSAWLEGGEYRVQRREAPLPI ERMRTALLARSILGNTRLELLESMVQTDLFGAINPESRPAGTESLLHKVLRQAVAVTCDTEDKARRARFAPDTTPIPPAK TLEDGFAAHAQPAPAAEKRPSQPKAKAAKSEPSAADSVSALFEQAKATPTSTASASPETPAPTSEKPNTQSSLFDLDSMQ VPKEPTVKQEDPFAEILSSASTLMREFFRALVQDVESGKVAVHWAEKGLVLQKRILGSYGIASETLVDNLRKLNLLASSQ GADIVLVERIGSLILARPQQ
Sequences:
>Translated_420_residues MNHTPMPIAALTATLGSRLDLVRQYANESSSADFERKWLSVLETCADWYSSMPLRPEQHPEPGGAFRATVETVYYALRLS GGQKFGADQPSERRRKLEPQYLYAVFLAACCTWLDEPFRHFQFYRLRDQAEWSPAAHGAFSAWLEGGEYRVQRREAPLPI ERMRTALLARSILGNTRLELLESMVQTDLFGAINPESRPAGTESLLHKVLRQAVAVTCDTEDKARRARFAPDTTPIPPAK TLEDGFAAHAQPAPAAEKRPSQPKAKAAKSEPSAADSVSALFEQAKATPTSTASASPETPAPTSEKPNTQSSLFDLDSMQ VPKEPTVKQEDPFAEILSSASTLMREFFRALVQDVESGKVAVHWAEKGLVLQKRILGSYGIASETLVDNLRKLNLLASSQ GADIVLVERIGSLILARPQQ >Mature_420_residues MNHTPMPIAALTATLGSRLDLVRQYANESSSADFERKWLSVLETCADWYSSMPLRPEQHPEPGGAFRATVETVYYALRLS GGQKFGADQPSERRRKLEPQYLYAVFLAACCTWLDEPFRHFQFYRLRDQAEWSPAAHGAFSAWLEGGEYRVQRREAPLPI ERMRTALLARSILGNTRLELLESMVQTDLFGAINPESRPAGTESLLHKVLRQAVAVTCDTEDKARRARFAPDTTPIPPAK TLEDGFAAHAQPAPAAEKRPSQPKAKAAKSEPSAADSVSALFEQAKATPTSTASASPETPAPTSEKPNTQSSLFDLDSMQ VPKEPTVKQEDPFAEILSSASTLMREFFRALVQDVESGKVAVHWAEKGLVLQKRILGSYGIASETLVDNLRKLNLLASSQ GADIVLVERIGSLILARPQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46290; Mature: 46290
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHTPMPIAALTATLGSRLDLVRQYANESSSADFERKWLSVLETCADWYSSMPLRPEQHP CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC EPGGAFRATVETVYYALRLSGGQKFGADQPSERRRKLEPQYLYAVFLAACCTWLDEPFRH CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH FQFYRLRDQAEWSPAAHGAFSAWLEGGEYRVQRREAPLPIERMRTALLARSILGNTRLEL HHHHHHHHHCCCCCHHHHHHHHHHCCCHHEEHHCCCCCCHHHHHHHHHHHHHHCHHHHHH LESMVQTDLFGAINPESRPAGTESLLHKVLRQAVAVTCDTEDKARRARFAPDTTPIPPAK HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCH TLEDGFAAHAQPAPAAEKRPSQPKAKAAKSEPSAADSVSALFEQAKATPTSTASASPETP HHHHHHHCCCCCCCCHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC APTSEKPNTQSSLFDLDSMQVPKEPTVKQEDPFAEILSSASTLMREFFRALVQDVESGKV CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE AVHWAEKGLVLQKRILGSYGIASETLVDNLRKLNLLASSQGADIVLVERIGSLILARPQQ EEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCC >Mature Secondary Structure MNHTPMPIAALTATLGSRLDLVRQYANESSSADFERKWLSVLETCADWYSSMPLRPEQHP CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC EPGGAFRATVETVYYALRLSGGQKFGADQPSERRRKLEPQYLYAVFLAACCTWLDEPFRH CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH FQFYRLRDQAEWSPAAHGAFSAWLEGGEYRVQRREAPLPIERMRTALLARSILGNTRLEL HHHHHHHHHCCCCCHHHHHHHHHHCCCHHEEHHCCCCCCHHHHHHHHHHHHHHCHHHHHH LESMVQTDLFGAINPESRPAGTESLLHKVLRQAVAVTCDTEDKARRARFAPDTTPIPPAK HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCH TLEDGFAAHAQPAPAAEKRPSQPKAKAAKSEPSAADSVSALFEQAKATPTSTASASPETP HHHHHHHCCCCCCCCHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC APTSEKPNTQSSLFDLDSMQVPKEPTVKQEDPFAEILSSASTLMREFFRALVQDVESGKV CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE AVHWAEKGLVLQKRILGSYGIASETLVDNLRKLNLLASSQGADIVLVERIGSLILARPQQ EEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA