Click here to switch to the map view.

The map label for this gene is 187928509

Identifier: 187928509

GI number: 187928509

Start: 1512947

End: 1513366

Strand: Reverse

Name: 187928509

Synonym: Rpic_1423

Alternate gene names: NA

Gene position: 1513366-1512947 (Counterclockwise)

Preceding gene: 187928510

Following gene: 187928508

Centisome position: 38.39

GC content: 65.71

Gene sequence:

>420_bases
GTGAGCACTGCACCTCTTCGTACGCCCGGCACTCCCGTCACCCCTGGCACCCCCGCTGCACCCGGCACGGCTTCAGGCGC
ACCGACCCGTCCGGGCATCGTCTCGCTGGCCATCAAGGATGAAGCTGGCCTGCACGCCGCCTACATGCCGTTCCTGAAGA
ACGGCGGCATCTTCGTGCCGACACAGCGCCCTTACCGGATTGGCGAGGAGGTCTTCCTCGTGCTGTCGCTGCTGGACCGC
CCGCAGAAGTATCAGGTGGCCGGCAAGGTAGCCTGGATCACGCCGGTGGGCACGCCGGCCAAGACGCCGGGCATTGGCGT
GCACCTTGGCGAAGATGAGCAGTGCCGCGTGCTGCGCCGTGTGATCGAAGAGGTGCTGGGCAAACAGATCAATTCGCAGC
GCCCCACCCAAACACTTTGA

Upstream 100 bases:

>100_bases
GCGGCTCGTCATCGAAAGCCTTTTGCTGGATTACCGGCAGCTCTTTCCGTCTGCCTGAACCCGAACCCGCACCTGAACGT
TTGCACTCTGTGGACACCCT

Downstream 100 bases:

>100_bases
TTTTTTCCTGATACGGCGCACGAAGTTTACGCCGTAACTTTCTGATTATTCGATGTTTGTCGATTCCCACTGTCATATCA
ATTTCCCCGACTTGCGCGCG

Product: type IV pilus assembly PilZ

Products: NA

Alternate protein names: Type 4 Fimbrial Biogenesis Protein PilZ; Type IV Pilus Biogenesis Protein PilZ; Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Assembly Protein PilZ; Type IV Fimbriae Assembly Protein; Type IV Pilus Assembly Protein; Type IV Fimbrial Biogenesis Protein PilZ; Type 4 Fimbrial Biogenesis Protein PILZ; Pilus Biogenesis Protein; Pilus Biogenesis Protein PilZ; Type Iv Pilus Assembly Pilz; DNA Polymerase-Related Protein; Tfp Pilus Assembly Protein; Tfp Pilus Assembly Protein PilZ; TYPE 4 Pilus Assembly Protein

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSTAPLRTPGTPVTPGTPAAPGTASGAPTRPGIVSLAIKDEAGLHAAYMPFLKNGGIFVPTQRPYRIGEEVFLVLSLLDR
PQKYQVAGKVAWITPVGTPAKTPGIGVHLGEDEQCRVLRRVIEEVLGKQINSQRPTQTL

Sequences:

>Translated_139_residues
MSTAPLRTPGTPVTPGTPAAPGTASGAPTRPGIVSLAIKDEAGLHAAYMPFLKNGGIFVPTQRPYRIGEEVFLVLSLLDR
PQKYQVAGKVAWITPVGTPAKTPGIGVHLGEDEQCRVLRRVIEEVLGKQINSQRPTQTL
>Mature_138_residues
STAPLRTPGTPVTPGTPAAPGTASGAPTRPGIVSLAIKDEAGLHAAYMPFLKNGGIFVPTQRPYRIGEEVFLVLSLLDRP
QKYQVAGKVAWITPVGTPAKTPGIGVHLGEDEQCRVLRRVIEEVLGKQINSQRPTQTL

Specific function: Unknown

COG id: COG3215

COG function: function code NU; Tfp pilus assembly protein PilZ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14789; Mature: 14658

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAPLRTPGTPVTPGTPAAPGTASGAPTRPGIVSLAIKDEAGLHAAYMPFLKNGGIFVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEE
TQRPYRIGEEVFLVLSLLDRPQKYQVAGKVAWITPVGTPAKTPGIGVHLGEDEQCRVLRR
CCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHH
VIEEVLGKQINSQRPTQTL
HHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
STAPLRTPGTPVTPGTPAAPGTASGAPTRPGIVSLAIKDEAGLHAAYMPFLKNGGIFVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEE
TQRPYRIGEEVFLVLSLLDRPQKYQVAGKVAWITPVGTPAKTPGIGVHLGEDEQCRVLRR
CCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHH
VIEEVLGKQINSQRPTQTL
HHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA