BacMap

Definition	Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession	NC_010682
Length	3,942,557

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The map label for this gene is 187928507

Identifier: 187928507

GI number: 187928507

Start: 1511253

End: 1512107

Strand: Reverse

Name: 187928507

Synonym: Rpic_1421

Alternate gene names: NA

Gene position: 1512107-1511253 (Counterclockwise)

Preceding gene: 187928508

Following gene: 187928505

Centisome position: 38.35

GC content: 63.63

Gene sequence:

>855_bases
ATGCGATACCGCGATAACTTGAAGCAAGCGATGAAAAAAATCGCACTGGCTGGTGCGCTGACCATGGCGTTGTCGGGTGC
CGCATTCGCCACGCCGCAGGACGATCTGCGCAACGCCGTCGAATACAACCGCCCGGCGCTGGTGCAGAAGTATGTCGCGC
AGGGCGTCGACCCCAACCTGAAGACCCGCGATGGCACGCCGCTGCTGGTGGATGCGCTCAAGGAGAAGAACATCGAGGTG
GCCGAGGCGCTCATCCGCGCCAAGAACATCGATTTCGAGCGCACCAATGCCGCAGGTGAAAACGCGCTGATGATGGCCGC
GTACCAGGGCCTGCTGCCCATGGTGAAGCTGATGGTGGAAACGTACGACGTGGAGGTCAACAAGACCGGCTGGACCGCGC
TGCATTACGCCGCCACCAATGGGTATGACGACATCGTCAAATACCTGCTCGACCACGCGGCCTATATCGATGCCGAAAGC
CCCAACGCGACCACGCCGCTGATGATGGCCGTCATGGGCGGGCACATCACCACCGTCAAGCTCCTGCTGGACGAGGGCGC
CGACATGAACCTGCGCAATCAGCAGAAGATGGACGTGATCGACTTCGCCAAGCGGTATCACCAGGATGAGATTGCTGCGG
GGCTGGAATCGCGCCGGCGCAAGCTGGCGGAGCAATCCGGCAAGCCTGCTGCAGCACCGGCGCCTGCGGCCGCAGTCTCG
CAGCCTGCCAAGCCTGCAGCGCCGGATGTGCCAACGCCGATGCCGCCCGCCAAACGCGGCGCCGGTGCGCCCAGCCCGGC
CGGTCGGGATACGATCGGCACGCCCACCAACATGCTGTTTGACAGCAACCGCTAG

Upstream 100 bases:

>100_bases
GCGTATGTGCGGCACGTGGGCGAATTCCTGGCTACGCTGCGCGGCGAACCACTCGAGCGGATTGCCAGCGCCACCACCGA
GAACTTCTTCAATCTATTCA

Downstream 100 bases:

>100_bases
ACGCGGCCCGAACGGCCCGGCACGTCAGCGCCGGTGCCGGGCGTGATGCGCTTCACGCCCGCCGCGCCAGCCGCACTCCG
GTGAACTGCCACCGTTGGTG

Product: Ankyrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRYRDNLKQAMKKIALAGALTMALSGAAFATPQDDLRNAVEYNRPALVQKYVAQGVDPNLKTRDGTPLLVDALKEKNIEV
AEALIRAKNIDFERTNAAGENALMMAAYQGLLPMVKLMVETYDVEVNKTGWTALHYAATNGYDDIVKYLLDHAAYIDAES
PNATTPLMMAVMGGHITTVKLLLDEGADMNLRNQQKMDVIDFAKRYHQDEIAAGLESRRRKLAEQSGKPAAAPAPAAAVS
QPAKPAAPDVPTPMPPAKRGAGAPSPAGRDTIGTPTNMLFDSNR

Sequences:

>Translated_284_residues
MRYRDNLKQAMKKIALAGALTMALSGAAFATPQDDLRNAVEYNRPALVQKYVAQGVDPNLKTRDGTPLLVDALKEKNIEV
AEALIRAKNIDFERTNAAGENALMMAAYQGLLPMVKLMVETYDVEVNKTGWTALHYAATNGYDDIVKYLLDHAAYIDAES
PNATTPLMMAVMGGHITTVKLLLDEGADMNLRNQQKMDVIDFAKRYHQDEIAAGLESRRRKLAEQSGKPAAAPAPAAAVS
QPAKPAAPDVPTPMPPAKRGAGAPSPAGRDTIGTPTNMLFDSNR
>Mature_284_residues
MRYRDNLKQAMKKIALAGALTMALSGAAFATPQDDLRNAVEYNRPALVQKYVAQGVDPNLKTRDGTPLLVDALKEKNIEV
AEALIRAKNIDFERTNAAGENALMMAAYQGLLPMVKLMVETYDVEVNKTGWTALHYAATNGYDDIVKYLLDHAAYIDAES
PNATTPLMMAVMGGHITTVKLLLDEGADMNLRNQQKMDVIDFAKRYHQDEIAAGLESRRRKLAEQSGKPAAAPAPAAAVS
QPAKPAAPDVPTPMPPAKRGAGAPSPAGRDTIGTPTNMLFDSNR

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI37620163, Length=151, Percent_Identity=36.4238410596026, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI46519147, Length=151, Percent_Identity=36.4238410596026, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI46519151, Length=151, Percent_Identity=36.4238410596026, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI148596917, Length=184, Percent_Identity=30.9782608695652, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI46519154, Length=151, Percent_Identity=36.4238410596026, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI38683816, Length=152, Percent_Identity=36.1842105263158, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI38683807, Length=152, Percent_Identity=36.1842105263158, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI62988328, Length=215, Percent_Identity=27.906976744186, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI268607595, Length=215, Percent_Identity=27.906976744186, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI34304381, Length=278, Percent_Identity=28.4172661870504, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI34304379, Length=278, Percent_Identity=28.4172661870504, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI55741641, Length=171, Percent_Identity=29.8245614035088, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI55770876, Length=235, Percent_Identity=28.936170212766, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI110431370, Length=167, Percent_Identity=30.5389221556886, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI38569428, Length=107, Percent_Identity=41.1214953271028, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI38569426, Length=107, Percent_Identity=41.1214953271028, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI256574792, Length=120, Percent_Identity=35, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI215598574, Length=131, Percent_Identity=32.824427480916, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI70780357, Length=131, Percent_Identity=32.824427480916, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI70780353, Length=131, Percent_Identity=32.824427480916, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI70780359, Length=131, Percent_Identity=32.824427480916, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI70780355, Length=131, Percent_Identity=32.824427480916, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI68131557, Length=160, Percent_Identity=34.375, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI157504499, Length=164, Percent_Identity=30.4878048780488, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI12746412, Length=166, Percent_Identity=31.9277108433735, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI38176283, Length=158, Percent_Identity=31.0126582278481, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI30089994, Length=158, Percent_Identity=31.0126582278481, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI52426737, Length=103, Percent_Identity=40.7766990291262, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI188595682, Length=103, Percent_Identity=40.7766990291262, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI116875852, Length=147, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI25145251, Length=163, Percent_Identity=32.5153374233129, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17542700, Length=163, Percent_Identity=32.5153374233129, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71981389, Length=163, Percent_Identity=32.5153374233129, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71981414, Length=163, Percent_Identity=32.5153374233129, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI281359521, Length=186, Percent_Identity=32.7956989247312, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI281359519, Length=186, Percent_Identity=32.7956989247312, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI28558752, Length=186, Percent_Identity=32.7956989247312, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI28558750, Length=186, Percent_Identity=32.7956989247312, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI28558756, Length=186, Percent_Identity=32.7956989247312, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI28558754, Length=186, Percent_Identity=32.7956989247312, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI161082089, Length=161, Percent_Identity=34.7826086956522, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI161082085, Length=155, Percent_Identity=34.1935483870968, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161082099, Length=155, Percent_Identity=34.1935483870968, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161082092, Length=161, Percent_Identity=34.7826086956522, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571867, Length=198, Percent_Identity=31.3131313131313, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571865, Length=198, Percent_Identity=31.3131313131313, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI161082110, Length=155, Percent_Identity=34.1935483870968, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI161082096, Length=155, Percent_Identity=34.1935483870968, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161082081, Length=155, Percent_Identity=34.1935483870968, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161082106, Length=155, Percent_Identity=34.1935483870968, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI20129611, Length=154, Percent_Identity=31.1688311688312, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45552223, Length=230, Percent_Identity=27.8260869565217, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221472807, Length=230, Percent_Identity=27.8260869565217, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI17998549, Length=230, Percent_Identity=27.8260869565217, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI45551135, Length=124, Percent_Identity=32.258064516129, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28573593, Length=128, Percent_Identity=32.03125, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45550479, Length=124, Percent_Identity=32.258064516129, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221330476, Length=128, Percent_Identity=32.03125, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221330480, Length=128, Percent_Identity=32.03125, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281363919, Length=124, Percent_Identity=32.258064516129, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45550629, Length=181, Percent_Identity=30.939226519337, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221330474, Length=128, Percent_Identity=32.03125, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221330482, Length=128, Percent_Identity=32.03125, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221330478, Length=128, Percent_Identity=32.03125, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 30674; Mature: 30674

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRDNLKQAMKKIALAGALTMALSGAAFATPQDDLRNAVEYNRPALVQKYVAQGVDPNL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC
KTRDGTPLLVDALKEKNIEVAEALIRAKNIDFERTNAAGENALMMAAYQGLLPMVKLMVE
CCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHH
TYDVEVNKTGWTALHYAATNGYDDIVKYLLDHAAYIDAESPNATTPLMMAVMGGHITTVK
HHCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHEEH
LLLDEGADMNLRNQQKMDVIDFAKRYHQDEIAAGLESRRRKLAEQSGKPAAAPAPAAAVS
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHC
QPAKPAAPDVPTPMPPAKRGAGAPSPAGRDTIGTPTNMLFDSNR
CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRYRDNLKQAMKKIALAGALTMALSGAAFATPQDDLRNAVEYNRPALVQKYVAQGVDPNL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC
KTRDGTPLLVDALKEKNIEVAEALIRAKNIDFERTNAAGENALMMAAYQGLLPMVKLMVE
CCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHH
TYDVEVNKTGWTALHYAATNGYDDIVKYLLDHAAYIDAESPNATTPLMMAVMGGHITTVK
HHCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHEEH
LLLDEGADMNLRNQQKMDVIDFAKRYHQDEIAAGLESRRRKLAEQSGKPAAAPAPAAAVS
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHC
QPAKPAAPDVPTPMPPAKRGAGAPSPAGRDTIGTPTNMLFDSNR
CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA