Click here to switch to the map view.

The map label for this gene is cdsA [H]

Identifier: 187928372

GI number: 187928372

Start: 1378052

End: 1378870

Strand: Direct

Name: cdsA [H]

Synonym: Rpic_1283

Alternate gene names: 187928372

Gene position: 1378052-1378870 (Clockwise)

Preceding gene: 187928371

Following gene: 187928373

Centisome position: 34.95

GC content: 64.71

Gene sequence:

>819_bases
ATGCTGCTGACTCGCGTCATTACCGCTGTCTGCCTGCTGATTGTCATCCTGCCCATTCTGTTCTTTGCGCCGCCCGCCGG
CCTGGCCGGGCTCGTGACGGTGGTTGCAGCCCTCGCCGCGTGGGAGTGGGGGCGTCTCGTGCGCCTGCCGGGCTGGTGGG
GGCCGGTTGTCTATGCGATCGTTGTCGTCATGCTGACGATCGCCTGGCACGACATTCCCGTTCGCGGTGATGTGCAGCCG
CTGTTCCATGGCGCAGTCGTCGCATGGGTGATCGCCTGGGCGCTGCTCGCCGGTGGCGTGCGCGAGCTGCACGGCACGCG
CAAAATCGTTTTCACGTTGCTTGGTTTGGTGATGCTGCCGGCGTTCGTGCATGGGGCTATTGAATTGCGCACGCACGGCG
TCGCCTTCCTGCTGTCGGTGGCGGTGCTCGTGTGGGCGGCCGATGTGGGTGCCTATTTTGTCGGCAAGGCCATGGGTCGC
CGCAAGCTGGCACCGACCATCAGCCCAGGCAAATCGTGGGAAGGGGCGATCGGCGGTGCCGTGCTCGTTGCAGTGATCGC
CACCGTGGCCGGCATCACGCATTGGTTTGCGCCGACGTGGTTCTCGCACGAGTTTGATCAGCGCGGTGCGGTTGCAGCCC
TGGCGCTGACCATCTTGCTGGTGGCCGCAAGCGTCGGCGGCGATTTGTTTGAATCCCTGCTCAAGCGTCAGGTCGGCATG
AAAGACAGCAGCCGCCTGTTGCCCGGCCACGGCGGTGTGCTCGATCGTATCGACGCACTGCTGCCAGTGTTTCCGCTGGC
TGCGCTGCTGATTTCCTGA

Upstream 100 bases:

>100_bases
CGCCTTTGCGTGGTATCGCAACCGCGAGCGCCGCTTCGGCCGCACAAGCGCCCAGCTCGAGCCCGATGTTCCCCCCGCGC
TATCCGCCGGAGCCTGACAC

Downstream 100 bases:

>100_bases
GGCGTCTGAACATGATGCGTTTGACCGTTCTTGGCGCCACTGGCTCCATTGGCGACAGCACGCTCGACGTGGTGCGCCGT
CATCCCGACAAATACAGCGT

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MLLTRVITAVCLLIVILPILFFAPPAGLAGLVTVVAALAAWEWGRLVRLPGWWGPVVYAIVVVMLTIAWHDIPVRGDVQP
LFHGAVVAWVIAWALLAGGVRELHGTRKIVFTLLGLVMLPAFVHGAIELRTHGVAFLLSVAVLVWAADVGAYFVGKAMGR
RKLAPTISPGKSWEGAIGGAVLVAVIATVAGITHWFAPTWFSHEFDQRGAVAALALTILLVAASVGGDLFESLLKRQVGM
KDSSRLLPGHGGVLDRIDALLPVFPLAALLIS

Sequences:

>Translated_272_residues
MLLTRVITAVCLLIVILPILFFAPPAGLAGLVTVVAALAAWEWGRLVRLPGWWGPVVYAIVVVMLTIAWHDIPVRGDVQP
LFHGAVVAWVIAWALLAGGVRELHGTRKIVFTLLGLVMLPAFVHGAIELRTHGVAFLLSVAVLVWAADVGAYFVGKAMGR
RKLAPTISPGKSWEGAIGGAVLVAVIATVAGITHWFAPTWFSHEFDQRGAVAALALTILLVAASVGGDLFESLLKRQVGM
KDSSRLLPGHGGVLDRIDALLPVFPLAALLIS
>Mature_272_residues
MLLTRVITAVCLLIVILPILFFAPPAGLAGLVTVVAALAAWEWGRLVRLPGWWGPVVYAIVVVMLTIAWHDIPVRGDVQP
LFHGAVVAWVIAWALLAGGVRELHGTRKIVFTLLGLVMLPAFVHGAIELRTHGVAFLLSVAVLVWAADVGAYFVGKAMGR
RKLAPTISPGKSWEGAIGGAVLVAVIATVAGITHWFAPTWFSHEFDQRGAVAALALTILLVAASVGGDLFESLLKRQVGM
KDSSRLLPGHGGVLDRIDALLPVFPLAALLIS

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=289, Percent_Identity=36.6782006920415, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1787677, Length=122, Percent_Identity=37.7049180327869, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 28852; Mature: 28852

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTRVITAVCLLIVILPILFFAPPAGLAGLVTVVAALAAWEWGRLVRLPGWWGPVVYAI
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHH
VVVMLTIAWHDIPVRGDVQPLFHGAVVAWVIAWALLAGGVRELHGTRKIVFTLLGLVMLP
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AFVHGAIELRTHGVAFLLSVAVLVWAADVGAYFVGKAMGRRKLAPTISPGKSWEGAIGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
VLVAVIATVAGITHWFAPTWFSHEFDQRGAVAALALTILLVAASVGGDLFESLLKRQVGM
HHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
KDSSRLLPGHGGVLDRIDALLPVFPLAALLIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLTRVITAVCLLIVILPILFFAPPAGLAGLVTVVAALAAWEWGRLVRLPGWWGPVVYAI
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHH
VVVMLTIAWHDIPVRGDVQPLFHGAVVAWVIAWALLAGGVRELHGTRKIVFTLLGLVMLP
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AFVHGAIELRTHGVAFLLSVAVLVWAADVGAYFVGKAMGRRKLAPTISPGKSWEGAIGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
VLVAVIATVAGITHWFAPTWFSHEFDQRGAVAALALTILLVAASVGGDLFESLLKRQVGM
HHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
KDSSRLLPGHGGVLDRIDALLPVFPLAALLIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]