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The map label for this gene is 187928255

Identifier: 187928255

GI number: 187928255

Start: 1254437

End: 1255540

Strand: Reverse

Name: 187928255

Synonym: Rpic_1165

Alternate gene names: NA

Gene position: 1255540-1254437 (Counterclockwise)

Preceding gene: 187928260

Following gene: 187928251

Centisome position: 31.85

GC content: 61.96

Gene sequence:

>1104_bases
ATGAGTATTCTGCTAACCGGCGCGACCGGTTTTGTAGGCGGCGCTGTTGCCGCCAACCTTGCGGACAAGGGTTTGCTGCG
CGACACCCGATTTGCGGTGCGCGGCGGCACCCCCGCCGACGGGCTCGTGCGCCTGCGAAACAACCTGCGCCGTTTTCAAT
TGCCGAAGACGGTGCTGGATGGCATTAGCGAAGCGCAAATCGTGCCGTTCGACTTGCGCAATGCGGCCGCCACCGCGCTT
GGCGACCCGGAAATCATCATCAACTGCGCCGCGCTGGCGACGTTTTCCAACCATCCGTCGCTGTGGGAAACCAACGTGGG
TGGCGTGCTGGCACTGGGCAGGCAGGCTGTCCAAGGCAAACGGCTGAAGCGCTTTCTGCAGGTTGGCACCGGCATGTCGT
GCGGCAAACTTGCTGACCGCCACGTGCAGGAAAGCTGGAACGTGCCGCCGCTTGAGCAACACGCGGTGCAGTACACCTAT
TCCAAAGGGATGGCCGAGCTGAAGCTGCGCGAAGCGTATCCCGAGTTGCCGCTGGTGGTAGTCCGACCGTCCATCGTAGT
CGGCCACAGCCAGTTGGGCTGCGCGCCGTCTGGCAGCATCTTCTGGATGCTGCGCATGGTCGCCCTGCTGGAGACCTTCA
GTTGCCGGTTGGGCGACCGTATCGACATCCTCCCCGTGGACGATTGCGCCGAGGCCATCGTGCGGCTGGCGCTCAAGCCG
ATGCTGGCGCACGACCTGTATCACATCAGCGCTGGCGACGCGCATTCGGAGCAGATCGCCACGCTGTACCCGCGCGTCAA
GCGCTGCGCGAGCCCGGAAGAAGATGCCCAGGCACTGGCCGATTACGTGTATCAGGAAAAAATCGAGGAGAAGGCGCTGG
CTCGCAAATTTCTGCGCTTGACCGAAGATGGCAACGTGCGTCTGGTCGCGCGATCCATCCACCTATATGCCAAGTTCGCC
AGCATGAGCTACGTGTTCGATAACACGCGACTGGTAACAGAGACGGGCTTTCAGCCGCGCTCGCTGCTCAGTTATCTAGA
CCGCTGCCTCGACACGTCGGACGCCGTGTCGATCACCGAGCAGATGCAGTGGGACTACAAATAA

Upstream 100 bases:

>100_bases
ACAAGCGCATCTGCGCCAATATCGATAACGGCGGCAACCTACATTTCTCGCGGATGAGCAAGTACCTTTGCGCAACGCGA
CGAATTTTCGAGTCTCAGGC

Downstream 100 bases:

>100_bases
GCGTCCCCAACTAAACCAAACCACCAGACCAACAGTAGCCTCACCGCCCTCGGCATGCGCCCGTGGGCGCGTGCGCGAGG
TAGTCTTTGCAGTCGTGAGC

Product: Male sterility domain

Products: NA

Alternate protein names: Male Sterility Domain; Male Sterility Domain Protein; Hemolysin F; Male Sterility Domain-Containing Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; Hemolysin HlyF; L-Aminoadipate-Semialdehyde Dehydrogenase Large Subunit

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSILLTGATGFVGGAVAANLADKGLLRDTRFAVRGGTPADGLVRLRNNLRRFQLPKTVLDGISEAQIVPFDLRNAAATAL
GDPEIIINCAALATFSNHPSLWETNVGGVLALGRQAVQGKRLKRFLQVGTGMSCGKLADRHVQESWNVPPLEQHAVQYTY
SKGMAELKLREAYPELPLVVVRPSIVVGHSQLGCAPSGSIFWMLRMVALLETFSCRLGDRIDILPVDDCAEAIVRLALKP
MLAHDLYHISAGDAHSEQIATLYPRVKRCASPEEDAQALADYVYQEKIEEKALARKFLRLTEDGNVRLVARSIHLYAKFA
SMSYVFDNTRLVTETGFQPRSLLSYLDRCLDTSDAVSITEQMQWDYK

Sequences:

>Translated_367_residues
MSILLTGATGFVGGAVAANLADKGLLRDTRFAVRGGTPADGLVRLRNNLRRFQLPKTVLDGISEAQIVPFDLRNAAATAL
GDPEIIINCAALATFSNHPSLWETNVGGVLALGRQAVQGKRLKRFLQVGTGMSCGKLADRHVQESWNVPPLEQHAVQYTY
SKGMAELKLREAYPELPLVVVRPSIVVGHSQLGCAPSGSIFWMLRMVALLETFSCRLGDRIDILPVDDCAEAIVRLALKP
MLAHDLYHISAGDAHSEQIATLYPRVKRCASPEEDAQALADYVYQEKIEEKALARKFLRLTEDGNVRLVARSIHLYAKFA
SMSYVFDNTRLVTETGFQPRSLLSYLDRCLDTSDAVSITEQMQWDYK
>Mature_366_residues
SILLTGATGFVGGAVAANLADKGLLRDTRFAVRGGTPADGLVRLRNNLRRFQLPKTVLDGISEAQIVPFDLRNAAATALG
DPEIIINCAALATFSNHPSLWETNVGGVLALGRQAVQGKRLKRFLQVGTGMSCGKLADRHVQESWNVPPLEQHAVQYTYS
KGMAELKLREAYPELPLVVVRPSIVVGHSQLGCAPSGSIFWMLRMVALLETFSCRLGDRIDILPVDDCAEAIVRLALKPM
LAHDLYHISAGDAHSEQIATLYPRVKRCASPEEDAQALADYVYQEKIEEKALARKFLRLTEDGNVRLVARSIHLYAKFAS
MSYVFDNTRLVTETGFQPRSLLSYLDRCLDTSDAVSITEQMQWDYK

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40488; Mature: 40357

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILLTGATGFVGGAVAANLADKGLLRDTRFAVRGGTPADGLVRLRNNLRRFQLPKTVLD
CEEEEECCCCHHHHHHHHHHHHCCCHHHCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHC
GISEAQIVPFDLRNAAATALGDPEIIINCAALATFSNHPSLWETNVGGVLALGRQAVQGK
CCCCCEEEEEEHHHHHHHHCCCCHHEEEEHHHHEECCCCCCEECCCCHHHHHHHHHHHHH
RLKRFLQVGTGMSCGKLADRHVQESWNVPPLEQHAVQYTYSKGMAELKLREAYPELPLVV
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEE
VRPSIVVGHSQLGCAPSGSIFWMLRMVALLETFSCRLGDRIDILPVDDCAEAIVRLALKP
ECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHH
MLAHDLYHISAGDAHSEQIATLYPRVKRCASPEEDAQALADYVYQEKIEEKALARKFLRL
HHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEDGNVRLVARSIHLYAKFASMSYVFDNTRLVTETGFQPRSLLSYLDRCLDTSDAVSITE
CCCCCEEEEEEHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHH
QMQWDYK
HHCCCCC
>Mature Secondary Structure 
SILLTGATGFVGGAVAANLADKGLLRDTRFAVRGGTPADGLVRLRNNLRRFQLPKTVLD
EEEEECCCCHHHHHHHHHHHHCCCHHHCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHC
GISEAQIVPFDLRNAAATALGDPEIIINCAALATFSNHPSLWETNVGGVLALGRQAVQGK
CCCCCEEEEEEHHHHHHHHCCCCHHEEEEHHHHEECCCCCCEECCCCHHHHHHHHHHHHH
RLKRFLQVGTGMSCGKLADRHVQESWNVPPLEQHAVQYTYSKGMAELKLREAYPELPLVV
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEE
VRPSIVVGHSQLGCAPSGSIFWMLRMVALLETFSCRLGDRIDILPVDDCAEAIVRLALKP
ECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHH
MLAHDLYHISAGDAHSEQIATLYPRVKRCASPEEDAQALADYVYQEKIEEKALARKFLRL
HHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEDGNVRLVARSIHLYAKFASMSYVFDNTRLVTETGFQPRSLLSYLDRCLDTSDAVSITE
CCCCCEEEEEEHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHH
QMQWDYK
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA