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The map label for this gene is 187928200

Identifier: 187928200

GI number: 187928200

Start: 1182264

End: 1183187

Strand: Direct

Name: 187928200

Synonym: Rpic_1107

Alternate gene names: NA

Gene position: 1182264-1183187 (Clockwise)

Preceding gene: 187928199

Following gene: 187928201

Centisome position: 29.99

GC content: 62.23

Gene sequence:

>924_bases
ATGAGCGACTTCATTTCGGAGTTCTGGGGGTATTACATCGCTGCGATCGCCCTTGTCGGCATCGTGTGGTGTGTCTGGTT
GCTGTTTTCGCAGCGGCGCATTCAGATTGCGCCCGGTCATAGCGCGGGCGAGGACACCGGCCATGTGTGGGACGGCGACC
TGCGCGAACTGAACAACCCGCTGCCACGCTGGTGGATGTGGATGTTCCTGCTGTCGTGCATCTTTGCGTTGGGGTACCTG
ATCCTCTACCCCGGGTTGGGTTCATACGGTGGCGTGCTCGGTTTCTCGACACGCGGCGAATTGGCCTCTCAGCGTGCTGC
GGCCGATGCACAGGTTCGCCCGGTCTATGAACGCTATGCCGGCATGGATATCAAGCAAATCGCCGCAGATCCTCAGGCCC
ATGAGATCGGCCAGCGCCTGTTCCTGAACAACTGCGCGCAGTGCCACGGCTCTGACGCGGGCGGCTCAAAGGGCTTCCCG
AACCTGACCGACAACGACTGGCTGTACGGAGGCGAGCCTGAGACGATCCTGACCACGATCACCAAGGGGCGTCACGGAGT
CATGCCATCGCTGGCAGCGGTGGTGGACGGCAATCAGGCTGTCAACGTGGCCAACTACGTGCGCTCGCTGTCGGGCCTGG
CTTACGACCCGATCAAGGCAGCGCGCGGTGAACCGACGTTCAAGTCGGTTTGCGCGGCCTGCCACATGGCAACCGGCAAG
GGCAATCAGGCGCTCGGCGCCCCCAACCTGACCGACCGCGTCTGGCTGTACGGCAGTTCGGAAGCGACCATCGTCGAGAC
CATCCTCAAAGGCCGTGACAACACGATGCCGGCACACGAGAACCTGCTCTCGCCGGAGAAAATCCGCATGCTGGCGGCCT
ATGTCTGGGGTCTGTCGAACAGCAACACGAGTCACGCGCAATGA

Upstream 100 bases:

>100_bases
TACGGAATCGGCCATGCTGCCGTTCCTGCTGCCCGATGAGGCCGAGGTCGCCGGTGCGCGCGCAGACGCGTCGCGCCCGC
ATCAATAAGGACACAGAATC

Downstream 100 bases:

>100_bases
GCGACAAAGAACCAGCCTGGCGCCCGATGACGCCCGCCACTGCGGCGGCGGGCGCCGAGGACGCACCGACCGAGCAGATG
CTCTATGAGGTCCGGCGCAA

Product: cbb3-type cytochrome c oxidase subunit III

Products: ferricytochrome c; H2O

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit III; Cytochrome C Class I; Cb-Type Cytochrome C Oxidase Subunit III; Cytochrome-C Oxidase FixP Chain; Cytochrome C Oxidase Subunit CcoP; Cytochrome C; Cytochrome-Cbb3 Oxidase Subunit III; Cytochrome C Oxidase Subunit; Cytochrome C Oxidase; Cytochrome C Oxidase Subunit III; Cytochrome-C Oxidase Subunit III; Cytochrome C Mono- And Diheme Variant; Cytochrome C Subfamily; Cytochrome C Oxidase CcoP Subunit; FixP2 Diheme C-Type Cytochrome; Class I Cytochrome C; Cytochrome C Mono- And Diheme Variants; FixP Protein; Cytochrome Oxidase Component Cytochrome C Protein; Cytochrome C Oxidase Cbb3-Type Di-Heme Subunit III; FixP3 Cytochrome C Oxidase Membrane Anchored Subunit; Gluconate 2-Dehydrogenase; Cytochrome Cbb3 Oxidase Diheme Subunit Membrane-Bound CcoP; Cbb3-Type Cytochrome C Oxidase Subunit CcoP; Membrane-Anchored Cbb3 Cytochrome Oxidase Subunit; Cytochrome C Oxidase Transmembrane Protein; Cytochrome C Oxidase Diheme Subunit Membrane-Bound; Cytochrome C Oxidase Protein FixP Chain; Cbb3 Oxidase Subunit III; Cytochrome C Oxidase FixP Chain Protein; Diheme Cytochrome C

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSDFISEFWGYYIAAIALVGIVWCVWLLFSQRRIQIAPGHSAGEDTGHVWDGDLRELNNPLPRWWMWMFLLSCIFALGYL
ILYPGLGSYGGVLGFSTRGELASQRAAADAQVRPVYERYAGMDIKQIAADPQAHEIGQRLFLNNCAQCHGSDAGGSKGFP
NLTDNDWLYGGEPETILTTITKGRHGVMPSLAAVVDGNQAVNVANYVRSLSGLAYDPIKAARGEPTFKSVCAACHMATGK
GNQALGAPNLTDRVWLYGSSEATIVETILKGRDNTMPAHENLLSPEKIRMLAAYVWGLSNSNTSHAQ

Sequences:

>Translated_307_residues
MSDFISEFWGYYIAAIALVGIVWCVWLLFSQRRIQIAPGHSAGEDTGHVWDGDLRELNNPLPRWWMWMFLLSCIFALGYL
ILYPGLGSYGGVLGFSTRGELASQRAAADAQVRPVYERYAGMDIKQIAADPQAHEIGQRLFLNNCAQCHGSDAGGSKGFP
NLTDNDWLYGGEPETILTTITKGRHGVMPSLAAVVDGNQAVNVANYVRSLSGLAYDPIKAARGEPTFKSVCAACHMATGK
GNQALGAPNLTDRVWLYGSSEATIVETILKGRDNTMPAHENLLSPEKIRMLAAYVWGLSNSNTSHAQ
>Mature_306_residues
SDFISEFWGYYIAAIALVGIVWCVWLLFSQRRIQIAPGHSAGEDTGHVWDGDLRELNNPLPRWWMWMFLLSCIFALGYLI
LYPGLGSYGGVLGFSTRGELASQRAAADAQVRPVYERYAGMDIKQIAADPQAHEIGQRLFLNNCAQCHGSDAGGSKGFPN
LTDNDWLYGGEPETILTTITKGRHGVMPSLAAVVDGNQAVNVANYVRSLSGLAYDPIKAARGEPTFKSVCAACHMATGKG
NQALGAPNLTDRVWLYGSSEATIVETILKGRDNTMPAHENLLSPEKIRMLAAYVWGLSNSNTSHAQ

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 33470; Mature: 33339

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFISEFWGYYIAAIALVGIVWCVWLLFSQRRIQIAPGHSAGEDTGHVWDGDLRELNNP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHCCC
LPRWWMWMFLLSCIFALGYLILYPGLGSYGGVLGFSTRGELASQRAAADAQVRPVYERYA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHC
GMDIKQIAADPQAHEIGQRLFLNNCAQCHGSDAGGSKGFPNLTDNDWLYGGEPETILTTI
CCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHH
TKGRHGVMPSLAAVVDGNQAVNVANYVRSLSGLAYDPIKAARGEPTFKSVCAACHMATGK
HCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHCCC
GNQALGAPNLTDRVWLYGSSEATIVETILKGRDNTMPAHENLLSPEKIRMLAAYVWGLSN
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCC
SNTSHAQ
CCCCCCC
>Mature Secondary Structure 
SDFISEFWGYYIAAIALVGIVWCVWLLFSQRRIQIAPGHSAGEDTGHVWDGDLRELNNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHCCC
LPRWWMWMFLLSCIFALGYLILYPGLGSYGGVLGFSTRGELASQRAAADAQVRPVYERYA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHC
GMDIKQIAADPQAHEIGQRLFLNNCAQCHGSDAGGSKGFPNLTDNDWLYGGEPETILTTI
CCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHH
TKGRHGVMPSLAAVVDGNQAVNVANYVRSLSGLAYDPIKAARGEPTFKSVCAACHMATGK
HCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHCCC
GNQALGAPNLTDRVWLYGSSEATIVETILKGRDNTMPAHENLLSPEKIRMLAAYVWGLSN
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCC
SNTSHAQ
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA