Click here to switch to the map view.

The map label for this gene is 187928199

Identifier: 187928199

GI number: 187928199

Start: 1182069

End: 1182251

Strand: Direct

Name: 187928199

Synonym: Rpic_1106

Alternate gene names: NA

Gene position: 1182069-1182251 (Clockwise)

Preceding gene: 187928198

Following gene: 187928200

Centisome position: 29.98

GC content: 62.84

Gene sequence:

>183_bases
ATGGCCATGCTGAGTGCAATTGCGACTGCCGTCTTTCTCGTGCTGTTCGTCTGCATTACCTGGTGGGCATTCTCCGCGCA
TCGCCGCGCTGCAAATACGGAATCGGCCATGCTGCCGTTCCTGCTGCCCGATGAGGCCGAGGTCGCCGGTGCGCGCGCAG
ACGCGTCGCGCCCGCATCAATAA

Upstream 100 bases:

>100_bases
CGCTTATCTGCAAGGCCTTGGCGTTGAGTTGCGTAACGTCCGGGACGTGGCTGTCGCTCCGGCTGCTGCGCCTGCCACTG
TTGCTGCCAAGGAGTAAGCC

Downstream 100 bases:

>100_bases
GGACACAGAATCATGAGCGACTTCATTTCGGAGTTCTGGGGGTATTACATCGCTGCGATCGCCCTTGTCGGCATCGTGTG
GTGTGTCTGGTTGCTGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MAMLSAIATAVFLVLFVCITWWAFSAHRRAANTESAMLPFLLPDEAEVAGARADASRPHQ

Sequences:

>Translated_60_residues
MAMLSAIATAVFLVLFVCITWWAFSAHRRAANTESAMLPFLLPDEAEVAGARADASRPHQ
>Mature_59_residues
AMLSAIATAVFLVLFVCITWWAFSAHRRAANTESAMLPFLLPDEAEVAGARADASRPHQ

Specific function: Unknown

COG id: COG4736

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 3

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6532; Mature: 6400

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLSAIATAVFLVLFVCITWWAFSAHRRAANTESAMLPFLLPDEAEVAGARADASRPHQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AMLSAIATAVFLVLFVCITWWAFSAHRRAANTESAMLPFLLPDEAEVAGARADASRPHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA